Factsheet for GSMUA_Achr3P24140_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
golgi 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P24750_001	Banana	cytosol	49.57	46.34
Os03t0831000-00	Rice	plastid	50.43	44.62
HORVU5Hr1G116070.3	Barley	cytosol	47.39	42.58
TraesCS5B01G508500.1	Wheat	cytosol	48.7	40.73
TraesCS4A01G365000.1	Wheat	cytosol	47.83	40.44
CDY08035	Canola	cytosol	17.39	40.4
KXG37199	Sorghum	cytosol	46.52	39.05
Zm00001d034749_P001	Maize	plastid	44.78	36.65
Solyc01g065570.2.1	Tomato	cytosol	36.52	35.29
KRH50796	Soybean	cytosol, nucleus, peroxisome	37.83	34.94
KRH12028	Soybean	cytosol	40.43	34.44
CDY34931	Canola	cytosol	33.48	34.22
KRH37055	Soybean	cytosol	40.0	34.07
CDX74082	Canola	cytosol	33.04	33.63
Bra001216.1-P	Field mustard	cytosol	32.17	32.74
PGSC0003DMT400003010	Potato	nucleus	36.09	32.68
KRH02299	Soybean	cytosol	37.83	32.46
TraesCS5D01G508400.1	Wheat	plastid	49.57	31.93
AT3G06778.1	Thale cress	cytosol	31.74	31.88
VIT_05s0077g01780.t01	Wine grape	nucleus	29.57	31.19
Bra040290.1-P	Field mustard	cytosol, mitochondrion	23.91	30.22
Bra041167.1-P	Field mustard	cytosol, nucleus, plastid	4.35	15.38
GSMUA_Achr4P05630_001	Banana	cytosol	20.87	9.56
GSMUA_Achr8P00660_001	Banana	cytosol	23.04	8.8
GSMUA_Achr11P...	Banana	nucleus	23.91	8.41
GSMUA_Achr10P...	Banana	cytosol	21.3	7.99
GSMUA_Achr6P12230_001	Banana	nucleus	18.26	7.24
GSMUA_Achr2P02410_001	Banana	cytosol	23.48	6.98
GSMUA_Achr5P00460_001	Banana	cytosol	21.74	6.88
GSMUA_Achr2P21160_001	Banana	cytosol	15.65	6.69
GSMUA_Achr11P...	Banana	cytosol	12.17	5.58
GSMUA_Achr3P02570_001	Banana	nucleus	11.3	4.97
GSMUA_Achr11P...	Banana	cytosol	4.78	4.8
GSMUA_Achr11P...	Banana	cytosol	1.3	1.82

Protein Annotations

EnsemblPlants:GSMUA_Achr3P24140_001	EnsemblPlants:GSMUA_Achr3T24140_001	EnsemblPlantsGene:GSMUA_Achr3G24140_001	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	ncoils:Coil	PANTHER:PTHR45089	PFAM:PF00226
PFscan:PS50076	PRINTS:PR00625	ScanProsite:PS00636	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI00029676F4
UniProt:M0SHD0	MapMan:35.2	:	:	:	:

Description

heat shock protein DnaJ, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G24140_001]

Coordinates

chr3:+:24775846..24776801

Molecular Weight (calculated)

27008.0 Da

IEP (calculated)

9.621

GRAVY (calculated)

-0.904

Length

230 amino acids

Sequence
(BLAST)

001: MAEELDSRAQ LAREICSISS MFTACTHRSR SPRRPPFVDW YLVLRVDEEA GIDVIRRQYR RLALQLHPDK NRHPKAEAAF KVVSEAYECL SDEVARRAFN
101: SERQDKFCRE CHSNSERQKA GVRTKLRRAV AALREAKKRF QEECRVIERC LEANKATQAG SPLFDPSVYL LYDGYPHYRD RVVVNTREQE QQFQCGDGDN
201: HRRKGRCESP LYEIRTERRA GRTMKSSFRF

Best Arabidopsis Sequence Match ( AT3G06778.1 )
(BLAST)

001: MGKIRPGPDP KAALVSDILA LSRSPISCIH INRISSGSCF IDWYLILGIQ EDAEVKVIRK RYHKLALKVH PDKNNHPKAD IAFKLIHEAY LCLSDETKRR
101: SFNIDRRNNI CLKCSRVSHK SKENRNDSKP NRFCQTLKDI RDKFREENMV IERCLKTNSA FFMGNRTNET PPVYGIPKQN RINKESPVFN PSDYRLWGYP
201: HVRNRVFDYN LSSDWNMFTR SRSTCVHSS

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JC50]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.