Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G508500.1 | Wheat | cytosol | 86.72 | 80.73 |
| TraesCS4A01G365000.1 | Wheat | cytosol | 84.38 | 79.41 |
| Os03t0831000-00 | Rice | plastid | 65.62 | 64.62 |
| TraesCS5D01G508400.1 | Wheat | plastid | 86.72 | 62.18 |
| KXG37199 | Sorghum | cytosol | 59.38 | 55.47 |
| Zm00001d034749_P001 | Maize | plastid | 57.03 | 51.96 |
| GSMUA_Achr3P24140_001 | Banana | nucleus | 42.58 | 47.39 |
| GSMUA_Achr1P24750_001 | Banana | cytosol | 36.72 | 38.21 |
| CDY08035 | Canola | cytosol | 14.45 | 37.37 |
| CDX74082 | Canola | cytosol | 28.52 | 32.3 |
| KRH50796 | Soybean | cytosol, nucleus, peroxisome | 31.25 | 32.13 |
| CDY34931 | Canola | cytosol | 28.12 | 32.0 |
| Solyc01g065570.2.1 | Tomato | cytosol | 29.69 | 31.93 |
| KRH12028 | Soybean | cytosol | 33.59 | 31.85 |
| KRH37055 | Soybean | cytosol | 33.59 | 31.85 |
| AT3G06778.1 | Thale cress | cytosol | 28.12 | 31.44 |
| Bra001216.1-P | Field mustard | cytosol | 27.73 | 31.42 |
| KRH02299 | Soybean | cytosol | 32.81 | 31.34 |
| Bra040290.1-P | Field mustard | cytosol, mitochondrion | 21.88 | 30.77 |
| PGSC0003DMT400003010 | Potato | nucleus | 30.08 | 30.32 |
| VIT_05s0077g01780.t01 | Wine grape | nucleus | 24.61 | 28.9 |
| Bra041167.1-P | Field mustard | cytosol, nucleus, plastid | 4.69 | 18.46 |
| HORVU2Hr1G070040.6 | Barley | cytosol | 21.48 | 7.46 |
| HORVU7Hr1G005730.1 | Barley | cytosol | 11.72 | 6.71 |
| HORVU4Hr1G083260.1 | Barley | cytosol | 19.14 | 6.42 |
| HORVU3Hr1G117190.1 | Barley | cytosol | 18.75 | 6.3 |
| HORVU6Hr1G033850.1 | Barley | cytosol | 21.88 | 5.74 |
| HORVU3Hr1G095280.1 | Barley | nucleus | 10.94 | 5.6 |
| HORVU4Hr1G043860.4 | Barley | cytosol | 20.7 | 5.58 |
| HORVU1Hr1G001860.1 | Barley | nucleus | 9.38 | 5.45 |
| HORVU3Hr1G096340.2 | Barley | cytosol | 14.84 | 5.08 |
| HORVU3Hr1G051850.2 | Barley | nucleus | 21.88 | 4.95 |
| HORVU7Hr1G050080.1 | Barley | nucleus | 19.92 | 4.93 |
| HORVU1Hr1G008940.2 | Barley | nucleus | 21.48 | 4.59 |
| HORVU2Hr1G013270.2 | Barley | cytosol | 7.42 | 2.19 |
| HORVU2Hr1G084660.1 | Barley | cytosol | 7.03 | 2.07 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G116070.3 | EnsemblPlantsGene:HORVU5Hr1G116070 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR44137 | PFAM:PF00226 | PFscan:PS50076 | PRINTS:PR00625 |
| ScanProsite:PS00636 | SEG:seg | SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI000B47FBF4 | UniProt:A0A287SUU1 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:647484904..647486575
Molecular Weight (calculated)
28632.6 Da
IEP (calculated)
10.600
GRAVY (calculated)
-0.865
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: TSMADAAGKA QAVREVCAAS AAFASCPHRR RSPRRAHFVD WYLVLAIGEA ASEDAIKRRF RHLALQLHPD KNRHPKAEVA FKLVSEAHAC LTDKARRRAF
101: DDERATAFCT ACHDRDRMRT PASAQQQQGR GSVTKPRGSG GGGGGRRPPA PTQALRELQN RLREECRVID GCLRANTAGA RRRQSFPLFD PSDRQRFPDY
201: PHARPPPSFA GCRQFEEEEL GAGRDHQSWC RDSSCESPVF QVRTAPERAA RPKHTW
101: DDERATAFCT ACHDRDRMRT PASAQQQQGR GSVTKPRGSG GGGGGRRPPA PTQALRELQN RLREECRVID GCLRANTAGA RRRQSFPLFD PSDRQRFPDY
201: PHARPPPSFA GCRQFEEEEL GAGRDHQSWC RDSSCESPVF QVRTAPERAA RPKHTW
001: MGKIRPGPDP KAALVSDILA LSRSPISCIH INRISSGSCF IDWYLILGIQ EDAEVKVIRK RYHKLALKVH PDKNNHPKAD IAFKLIHEAY LCLSDETKRR
101: SFNIDRRNNI CLKCSRVSHK SKENRNDSKP NRFCQTLKDI RDKFREENMV IERCLKTNSA FFMGNRTNET PPVYGIPKQN RINKESPVFN PSDYRLWGYP
201: HVRNRVFDYN LSSDWNMFTR SRSTCVHSS
101: SFNIDRRNNI CLKCSRVSHK SKENRNDSKP NRFCQTLKDI RDKFREENMV IERCLKTNSA FFMGNRTNET PPVYGIPKQN RINKESPVFN PSDYRLWGYP
201: HVRNRVFDYN LSSDWNMFTR SRSTCVHSS
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JC50]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.