Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34931 | Canola | cytosol | 84.28 | 85.78 |
| CDX74082 | Canola | cytosol | 81.22 | 82.3 |
| Bra001216.1-P | Field mustard | cytosol | 80.35 | 81.42 |
| Bra041167.1-P | Field mustard | cytosol, nucleus, plastid | 22.71 | 80.0 |
| CDY08035 | Canola | cytosol | 34.5 | 79.8 |
| Bra040290.1-P | Field mustard | cytosol, mitochondrion | 61.14 | 76.92 |
| KRH02299 | Soybean | cytosol | 43.67 | 37.31 |
| KRH50796 | Soybean | cytosol, nucleus, peroxisome | 39.74 | 36.55 |
| Solyc01g065570.2.1 | Tomato | cytosol | 37.12 | 35.71 |
| GSMUA_Achr1P24750_001 | Banana | cytosol | 36.68 | 34.15 |
| KRH12028 | Soybean | cytosol | 40.17 | 34.07 |
| PGSC0003DMT400003010 | Potato | nucleus | 37.12 | 33.46 |
| KRH37055 | Soybean | cytosol | 39.3 | 33.33 |
| GSMUA_Achr3P24140_001 | Banana | nucleus | 31.88 | 31.74 |
| VIT_05s0077g01780.t01 | Wine grape | nucleus | 27.51 | 28.9 |
| HORVU5Hr1G116070.3 | Barley | cytosol | 31.44 | 28.12 |
| Os03t0831000-00 | Rice | plastid | 30.57 | 26.92 |
| TraesCS4A01G365000.1 | Wheat | cytosol | 31.0 | 26.1 |
| TraesCS5B01G508500.1 | Wheat | cytosol | 30.57 | 25.45 |
| KXG37199 | Sorghum | cytosol | 30.13 | 25.18 |
| Zm00001d034749_P001 | Maize | plastid | 30.57 | 24.91 |
| TraesCS5D01G508400.1 | Wheat | plastid | 31.0 | 19.89 |
| AT5G37760.1 | Thale cress | cytosol | 13.54 | 14.98 |
| AT5G37750.1 | Thale cress | cytosol | 15.72 | 14.94 |
| AT5G37440.1 | Thale cress | cytosol | 16.59 | 13.24 |
| AT4G19580.1 | Thale cress | cytosol | 16.16 | 11.86 |
| AT5G62780.1 | Thale cress | cytosol | 9.61 | 10.63 |
| AT4G19590.2 | Thale cress | nucleus | 17.03 | 10.43 |
| AT5G37380.6 | Thale cress | nucleus | 16.16 | 8.58 |
| AT4G19570.1 | Thale cress | nucleus | 20.09 | 8.24 |
| AT3G06340.4 | Thale cress | cytosol | 24.02 | 8.17 |
| AT2G05250.1 | Thale cress | cytosol | 24.02 | 7.79 |
| AT2G05230.1 | Thale cress | cytosol | 24.02 | 7.79 |
| AT2G35540.1 | Thale cress | nucleus | 17.9 | 6.95 |
| AT5G18750.1 | Thale cress | nucleus | 26.2 | 6.79 |
| AT2G25560.1 | Thale cress | cytosol | 19.21 | 6.71 |
| AT5G53150.3 | Thale cress | cytosol | 21.83 | 6.62 |
| AT5G18740.1 | Thale cress | nucleus | 10.92 | 5.81 |
| AT5G50115.1 | Thale cress | cytosol | 12.23 | 5.77 |
| AT5G27240.1 | Thale cress | nucleus | 23.58 | 4.89 |
| AT4G27980.2 | Thale cress | cytosol | 12.23 | 4.64 |
| AT3G04980.2 | Thale cress | nucleus | 23.14 | 4.48 |
| AT3G05110.1 | Thale cress | nucleus | 6.99 | 4.3 |
| AT3G04960.3 | Thale cress | cytosol | 11.35 | 4.3 |
| AT5G35753.1 | Thale cress | cytosol | 6.99 | 3.73 |
| AT5G18730.1 | Thale cress | cytosol | 7.86 | 3.41 |
| AT5G18720.3 | Thale cress | extracellular, golgi | 0.87 | 0.58 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:35.2 | EntrezGene:5007987 | ProteinID:AEE74457.1 | ArrayExpress:AT3G06778 | EnsemblPlantsGene:AT3G06778 |
| RefSeq:AT3G06778 | TAIR:AT3G06778 | RefSeq:AT3G06778-TAIR-G | EnsemblPlants:AT3G06778.1 | TAIR:AT3G06778.1 | InterPro:DnaJ_domain |
| UniProt:F4JC50 | GO:GO:0005575 | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | RefSeq:NP_001078117.1 |
| PFAM:PF00226 | PO:PO:0000293 | PRINTS:PR00625 | PFscan:PS50076 | PANTHER:PTHR44137 | SMART:SM00271 |
| SUPFAM:SSF46565 | UniParc:UPI00015056C5 | : | : | : | : |
Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JC50]
Coordinates
chr3:-:2140026..2141547
Molecular Weight (calculated)
26715.0 Da
IEP (calculated)
10.230
GRAVY (calculated)
-0.706
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKIRPGPDP KAALVSDILA LSRSPISCIH INRISSGSCF IDWYLILGIQ EDAEVKVIRK RYHKLALKVH PDKNNHPKAD IAFKLIHEAY LCLSDETKRR
101: SFNIDRRNNI CLKCSRVSHK SKENRNDSKP NRFCQTLKDI RDKFREENMV IERCLKTNSA FFMGNRTNET PPVYGIPKQN RINKESPVFN PSDYRLWGYP
201: HVRNRVFDYN LSSDWNMFTR SRSTCVHSS
101: SFNIDRRNNI CLKCSRVSHK SKENRNDSKP NRFCQTLKDI RDKFREENMV IERCLKTNSA FFMGNRTNET PPVYGIPKQN RINKESPVFN PSDYRLWGYP
201: HVRNRVFDYN LSSDWNMFTR SRSTCVHSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.