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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT5G62780.1 Thale cress cytosol 22.04 59.42
CDY12569 Canola cytosol 36.74 57.26
CDY60010 Canola cytosol, mitochondrion, nucleus 22.04 55.91
Bra040300.1-P Field mustard cytosol 36.74 55.56
AT5G37750.1 Thale cress cytosol 20.79 48.13
PGSC0003DMT400039473 Potato nucleus 12.54 47.3
Solyc03g019630.1.1 Tomato nucleus 12.54 44.87
KRG89459 Soybean cytosol 8.42 43.12
AT5G37440.1 Thale cress cytosol 21.86 42.51
AT4G19580.1 Thale cress cytosol 19.53 34.94
AT4G19590.2 Thale cress nucleus 20.25 30.21
AT5G37760.1 Thale cress cytosol 11.11 29.95
AT5G37380.6 Thale cress nucleus 16.31 21.11
GSMUA_Achr8P00660_001 Banana cytosol 22.04 20.43
AT3G06778.1 Thale cress cytosol 8.24 20.09
GSMUA_Achr10P... Banana cytosol 20.97 19.09
GSMUA_Achr11P... Banana cytosol 17.03 18.92
AT5G53150.3 Thale cress cytosol 23.66 17.48
AT2G25560.1 Thale cress cytosol 20.25 17.23
GSMUA_Achr2P21160_001 Banana cytosol 16.31 16.91
TraesCS3D01G541800.1 Wheat cytosol 22.4 16.76
TraesCS3A01G536400.1 Wheat cytosol 22.22 16.71
TraesCS3B01G607500.1 Wheat cytosol 22.22 16.71
GSMUA_Achr6P12230_001 Banana nucleus 17.2 16.55
EES10633 Sorghum cytosol 21.33 16.19
Os03t0401200-01 Rice cytosol 21.68 16.18
OQU85000 Sorghum cytosol 20.97 16.07
TraesCS4D01G315600.1 Wheat cytosol 21.86 16.03
TraesCS4B01G319100.1 Wheat cytosol 20.43 16.01
TraesCS2A01G284200.2 Wheat cytosol 20.97 15.96
TraesCS2D01G283100.2 Wheat cytosol 20.97 15.96
TraesCS5A01G493100.1 Wheat cytosol 21.68 15.9
TraesCS2B01G301100.1 Wheat cytosol 20.07 15.86
Os02t0510000-01 Rice cytosol 20.79 15.8
Zm00001d025238_P001 Maize cytosol 20.79 15.8
EES07899 Sorghum cytosol 20.79 15.78
Zm00001d003948_P001 Maize cytosol 20.61 15.62
GSMUA_Achr3P02570_001 Banana nucleus 14.52 15.49
AT3G06340.4 Thale cress cytosol 18.46 15.3
Zm00001d025584_P001 Maize cytosol 20.07 15.28
Zm00001d025585_P001 Maize cytosol 19.89 15.14
AT2G05250.1 Thale cress cytosol 18.64 14.73
AT2G05230.1 Thale cress cytosol 18.64 14.73
EES10933 Sorghum cytosol 19.0 14.64
Os01t0923800-01 Rice nucleus 19.35 14.52
TraesCS3B01G470100.1 Wheat nucleus 18.64 14.33
AT2G35540.1 Thale cress nucleus 15.05 14.24
AT5G50115.1 Thale cress cytosol 11.65 13.4
Zm00001d050565_P001 Maize cytosol 15.41 13.35
KXG34016 Sorghum nucleus 19.71 13.27
TraesCS3A01G435100.1 Wheat nucleus 18.64 13.15
Zm00001d011997_P001 Maize nucleus 19.0 12.9
AT5G18750.1 Thale cress nucleus 19.35 12.22
AT3G04980.2 Thale cress nucleus 20.43 9.64
AT5G27240.1 Thale cress nucleus 17.92 9.06
AT3G05110.1 Thale cress nucleus 5.56 8.33
AT3G04960.3 Thale cress cytosol 8.96 8.26
Os04t0388800-01 Rice nucleus 8.78 8.19
AT5G18740.1 Thale cress nucleus 5.73 7.44
AT4G27980.2 Thale cress cytosol 7.17 6.63
AT5G35753.1 Thale cress cytosol 4.12 5.36
AT5G18730.1 Thale cress cytosol 4.66 4.92
AT5G18720.3 Thale cress extracellular, golgi 1.43 2.34
Protein Annotations
Gene3D:1.10.287.110MapMan:35.2EntrezGene:827699ProteinID:AEE84200.1ArrayExpress:AT4G19570EnsemblPlantsGene:AT4G19570
RefSeq:AT4G19570TAIR:AT4G19570RefSeq:AT4G19570-TAIR-GEnsemblPlants:AT4G19570.1TAIR:AT4G19570.1Unigene:At.32803
EMBL:BT005802InterPro:DnaJ_domainInterPro:DnaJ_domain_CSInterPro:IPR001623InterPro:IPR036869InterPro:J_dom_sf
RefSeq:NP_193692.2PFAM:PF00226PRINTS:PR00625ScanProsite:PS00636PFscan:PS50076UniProt:Q84TH2
SMART:SM00271SUPFAM:SSF46565UniParc:UPI000000C74ASEG:seg::
Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84TH2]
Coordinates
chr4:+:10665294..10667318
Molecular Weight (calculated)
62948.9 Da
IEP (calculated)
9.289
GRAVY (calculated)
-0.808
Length
558 amino acids
Sequence
(BLAST)
001: MESNKEEAKR ALDIAEKKLS KNDYNRAKRY AKKAHRMYPN LVGLEQVLIM IDVYISATNK INGEADWYRV LGVDPLADDE AVKKRYRKLA LLLHPDKNRF
101: TGAEGAFKLI LEAWDLLSDK SQRSSYDQKR KSNQVKQRTS GMQKPKRSST PKPTESDKPA SSYGPTPPPE PRPKRRPRPN IPEPDIPMPM PTRHKPKSKP
201: DISLTTVKVG TFWTVCNRCK TYCEFMRASC LNKTVPCPNC GKYFIATVIP SELVNGRLVI RLSPCNQSTW KKASDDTSST SAMAKTVPER VKRWFDPMPE
301: MDSSTQKIGT FWTVCSRCKT HCKLVRANHL NKTFPCPNCS QEFVAAEMII EVINGGPVIK LSPSVQSNSK RTRDASSTTS ASDKAQRTAY QKEEVLKREK
401: IDPDVASAAT GENVKVAETL FKEPMTTGNE NSTTEEGIVK ESETLCKEPM TTGNENSTTE EGNVKEAETF FEEPMTTGNV KEVETLFEEP MTTDNENSTP
501: EAERLFKKPM STGDENSTHE AQRLFKKPMT TGNANSNLEA QRCFLRIWQR EMQSLLLK
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.