Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- endoplasmic reticulum 1
- golgi 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19714 | Canola | nucleus | 56.79 | 65.18 |
| CDX99992 | Canola | cytosol | 55.53 | 65.14 |
| Bra009972.1-P | Field mustard | nucleus | 36.23 | 63.59 |
| CDX86172 | Canola | nucleus | 36.23 | 63.59 |
| CDX80667 | Canola | nucleus | 37.32 | 61.95 |
| AT3G04980.2 | Thale cress | nucleus | 45.47 | 42.43 |
| PGSC0003DMT400057888 | Potato | cytosol | 7.43 | 41.41 |
| PGSC0003DMT400089411 | Potato | cytosol | 7.88 | 38.84 |
| AT5G18750.1 | Thale cress | nucleus | 24.55 | 30.66 |
| Solyc01g098250.2.1 | Tomato | nucleus | 26.99 | 30.01 |
| VIT_14s0030g00640.t01 | Wine grape | nucleus | 31.43 | 29.68 |
| AT3G06340.4 | Thale cress | cytosol | 17.66 | 28.97 |
| Solyc08g029220.1.1 | Tomato | nucleus | 20.56 | 28.77 |
| AT5G37750.1 | Thale cress | cytosol | 6.25 | 28.63 |
| PGSC0003DMT400057894 | Potato | cytosol | 10.05 | 28.61 |
| PGSC0003DMT400038431 | Potato | nucleus | 20.29 | 28.46 |
| AT3G05110.1 | Thale cress | nucleus | 9.51 | 28.23 |
| PGSC0003DMT400057904 | Potato | nucleus | 27.36 | 27.94 |
| AT5G18730.1 | Thale cress | cytosol | 13.13 | 27.46 |
| AT5G50115.1 | Thale cress | cytosol | 11.96 | 27.22 |
| Solyc10g007630.1.1 | Tomato | cytosol | 11.96 | 27.16 |
| Solyc01g098340.2.1 | Tomato | cytosol | 19.38 | 26.75 |
| AT5G37440.1 | Thale cress | cytosol | 6.88 | 26.48 |
| PGSC0003DMT400054841 | Potato | cytosol | 11.78 | 26.32 |
| AT5G18740.1 | Thale cress | nucleus | 10.14 | 26.05 |
| PGSC0003DMT400057887 | Potato | cytosol | 19.84 | 26.01 |
| AT2G25560.1 | Thale cress | cytosol | 15.04 | 25.3 |
| AT5G37380.6 | Thale cress | nucleus | 9.87 | 25.29 |
| PGSC0003DMT400057893 | Potato | cytosol | 11.05 | 25.21 |
| AT5G37760.1 | Thale cress | cytosol | 4.62 | 24.64 |
| Solyc01g098310.1.1 | Tomato | cytosol | 10.14 | 24.56 |
| AT3G04960.3 | Thale cress | cytosol | 13.41 | 24.46 |
| AT5G53150.3 | Thale cress | cytosol | 16.58 | 24.24 |
| AT2G35540.1 | Thale cress | nucleus | 12.77 | 23.9 |
| AT4G19590.2 | Thale cress | nucleus | 8.06 | 23.8 |
| AT4G19580.1 | Thale cress | cytosol | 6.7 | 23.72 |
| AT3G06778.1 | Thale cress | cytosol | 4.89 | 23.58 |
| AT2G05230.1 | Thale cress | cytosol | 14.4 | 22.52 |
| AT2G05250.1 | Thale cress | cytosol | 14.4 | 22.52 |
| AT5G18720.3 | Thale cress | extracellular, golgi | 6.7 | 21.64 |
| Solyc01g098330.1.1 | Tomato | nucleus | 7.79 | 20.98 |
| AT5G62780.1 | Thale cress | cytosol | 3.89 | 20.77 |
| AT4G27980.2 | Thale cress | cytosol | 11.32 | 20.73 |
| AT5G35753.1 | Thale cress | cytosol | 7.97 | 20.51 |
| AT4G19570.1 | Thale cress | nucleus | 9.06 | 17.92 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:35.2 | EntrezGene:832782 | ProteinID:AED93662.1 | ProteinID:ANM71200.1 | ProteinID:ANM71201.1 |
| ArrayExpress:AT5G27240 | EnsemblPlantsGene:AT5G27240 | RefSeq:AT5G27240 | TAIR:AT5G27240 | RefSeq:AT5G27240-TAIR-G | EnsemblPlants:AT5G27240.1 |
| TAIR:AT5G27240.1 | Unigene:At.30817 | InterPro:DUF3444 | InterPro:DnaJ_domain | UniProt:F4K2V2 | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | RefSeq:NP_001318662.1 | RefSeq:NP_001332746.1 | RefSeq:NP_198076.1 | PFAM:PF00226 |
| PFAM:PF11926 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007098 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0025022 | PRINTS:PR00625 | PFscan:PS50076 | SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI00001625EF |
| SEG:seg | : | : | : | : | : |
Description
DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4K2V2]
Coordinates
chr5:+:9596766..9601233
Molecular Weight (calculated)
124450.0 Da
IEP (calculated)
9.247
GRAVY (calculated)
-0.832
Length
1104 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDWNKEEACR AKTLAEDKMK EGDFVGAQKL LLKAQSLFSG LESLPQMLAV CDVHNSAEKK INCLENWYGI LQVMHFADDA TIKKQVRKLA LLLHPDKNQF
0101: PGAEAAFKLV WDASRFLADK DKRSQYDIRR RIYLRLATNQ LNANSGLQCA ATNSATDTFW TCCEHCGYRY KYLRKYVNIL LNCNICQRSY MAYDTGFNEA
0201: PSKSNTGQKE VQNQGPCNTS LNTNGESIGA QPGSVAAEVD KKGTFNKKFN KRNGGGESKK TEVKNSKIET EFVRNDDEEK MKSAAKLHKP HPEVTEPEIG
0301: ASKSVPDESV SRSDEAPSTS KDKNKMKKGV EESINVDGSD FIKDKAYSKD NNKRKSPRRS QQSSYAEEEK ISDNSLGPPK KRLRSNVGLK SEQTTRKGLV
0401: GVGSSKRFDS GGGSSAPSCA FKRKAKKFVD SGYQEISSVK DKEREVRKAS GEGVVMEAKI DNNHNPNENL ITEDLPDPEF SNFELTTSCF GVNQVWSMYD
0501: PIDGMPRLYA RIDKVLVPEF KLWITWIDPL QDNKDNSIPI ACGIFQGGGS EEENDHLKFS CQMFHLTRNN SVVIYPRKGE IWAIFRGWDI SWSASSENHK
0601: HPYEYDFVEV LSNFNDENGL GVGFLGKVEG FVSLFRQDAQ DGVLQLQIPP SQMLRFSHKV PSFKMTGKER EGVPPGCFEL DPAALPKELF EVYDSKVDVG
0701: LDRELPNGKT GGPFPEASKV EMQANTTRES SPFKKKRPKV HDNHGSFSKE SDGRRTNHER NSAKESRKSV KAVDALNLRK SPRLLSETNS QANSRSGRQI
0801: AEKKSANNGE SCGKPGGLSL SGEKMSEKTI TRMRKTPQDI HKPTVNVKKH GRNDESLSQS RGDGLLTQLN GNMKSSEPET RVPSSCKTVK ENTFNFENQR
0901: SWDKFQIDQI WAIYSNDKGS PRKYAQIKKI DTSPEFKLHV APLELYRPPI HMPRPVCCGR FKLKTGKAEV YVPSSFSHQV KAVKTKKNRF EVYPGKGEIW
1001: ALYKNCNTRD YTETEELEIV EVVETDEQRI QAMTLTAKGF NNKPLYRRSE ESNASFIDIP KTEVCRFSHQ IPAFRHESRA TRFGDGQYWE LDLKAVLGLN
1101: LKNP
0101: PGAEAAFKLV WDASRFLADK DKRSQYDIRR RIYLRLATNQ LNANSGLQCA ATNSATDTFW TCCEHCGYRY KYLRKYVNIL LNCNICQRSY MAYDTGFNEA
0201: PSKSNTGQKE VQNQGPCNTS LNTNGESIGA QPGSVAAEVD KKGTFNKKFN KRNGGGESKK TEVKNSKIET EFVRNDDEEK MKSAAKLHKP HPEVTEPEIG
0301: ASKSVPDESV SRSDEAPSTS KDKNKMKKGV EESINVDGSD FIKDKAYSKD NNKRKSPRRS QQSSYAEEEK ISDNSLGPPK KRLRSNVGLK SEQTTRKGLV
0401: GVGSSKRFDS GGGSSAPSCA FKRKAKKFVD SGYQEISSVK DKEREVRKAS GEGVVMEAKI DNNHNPNENL ITEDLPDPEF SNFELTTSCF GVNQVWSMYD
0501: PIDGMPRLYA RIDKVLVPEF KLWITWIDPL QDNKDNSIPI ACGIFQGGGS EEENDHLKFS CQMFHLTRNN SVVIYPRKGE IWAIFRGWDI SWSASSENHK
0601: HPYEYDFVEV LSNFNDENGL GVGFLGKVEG FVSLFRQDAQ DGVLQLQIPP SQMLRFSHKV PSFKMTGKER EGVPPGCFEL DPAALPKELF EVYDSKVDVG
0701: LDRELPNGKT GGPFPEASKV EMQANTTRES SPFKKKRPKV HDNHGSFSKE SDGRRTNHER NSAKESRKSV KAVDALNLRK SPRLLSETNS QANSRSGRQI
0801: AEKKSANNGE SCGKPGGLSL SGEKMSEKTI TRMRKTPQDI HKPTVNVKKH GRNDESLSQS RGDGLLTQLN GNMKSSEPET RVPSSCKTVK ENTFNFENQR
0901: SWDKFQIDQI WAIYSNDKGS PRKYAQIKKI DTSPEFKLHV APLELYRPPI HMPRPVCCGR FKLKTGKAEV YVPSSFSHQV KAVKTKKNRF EVYPGKGEIW
1001: ALYKNCNTRD YTETEELEIV EVVETDEQRI QAMTLTAKGF NNKPLYRRSE ESNASFIDIP KTEVCRFSHQ IPAFRHESRA TRFGDGQYWE LDLKAVLGLN
1101: LKNP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.