Factsheet for Bra009972.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
endoplasmic reticulum 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	endoplasmic reticulum
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86172	Canola	nucleus	100.0	100.0
Bra020958.1-P	Field mustard	cytosol	7.79	48.04
Bra039476.1-P	Field mustard	cytosol	15.26	46.6
Bra031906.1-P	Field mustard	cytosol	6.52	44.57
PGSC0003DMT400057888	Potato	cytosol	12.4	39.39
AT5G27240.1	Thale cress	nucleus	63.59	36.23
PGSC0003DMT400089411	Potato	cytosol	11.76	33.04
Bra020957.1-P	Field mustard	cytosol	10.81	33.01
Bra001194.1-P	Field mustard	cytosol	10.49	32.67
Bra017315.1-P	Field mustard	nucleus	19.87	26.21
GSMUA_Achr11P...	Banana	nucleus	26.71	25.69
Bra020757.1-P	Field mustard	nucleus	26.39	25.42
Bra024236.1-P	Field mustard	nucleus	14.31	24.46
Bra034258.1-P	Field mustard	cytosol	23.85	24.23
Bra039461.1-P	Field mustard	cytosol	20.35	24.02
Solyc10g007630.1.1	Tomato	cytosol	18.44	23.87
Solyc08g029220.1.1	Tomato	nucleus	29.89	23.83
PGSC0003DMT400054841	Potato	cytosol	18.6	23.68
PGSC0003DMT400038431	Potato	nucleus	29.41	23.51
Bra003079.1-P	Field mustard	cytosol	26.39	23.41
Bra007790.1-P	Field mustard	nucleus	21.94	23.31
Bra039477.1-P	Field mustard	plastid	19.87	23.23
PGSC0003DMT400057894	Potato	cytosol	14.31	23.2
GSMUA_Achr2P02410_001	Banana	cytosol	28.46	23.13
Bra020955.1-P	Field mustard	cytosol	10.33	23.05
Bra005331.1-P	Field mustard	nucleus	19.24	23.05
Bra020956.1-P	Field mustard	nucleus	12.56	22.64
Solyc01g098310.1.1	Tomato	cytosol	16.22	22.37
GSMUA_Achr5P00460_001	Banana	cytosol	25.76	22.28
PGSC0003DMT400057893	Potato	cytosol	16.53	21.49
Bra040300.1-P	Field mustard	cytosol	12.56	21.41
EES08665	Sorghum	nucleus	22.73	21.06
Bra038959.1-P	Field mustard	nucleus	12.56	20.52
Bra001216.1-P	Field mustard	cytosol	7.31	20.35
Bra035378.1-P	Field mustard	cytosol	21.46	19.62
Bra006479.1-P	Field mustard	cytosol	17.17	19.57
Bra040290.1-P	Field mustard	cytosol, mitochondrion	5.56	19.23
Bra002183.1-P	Field mustard	nucleus	17.33	19.19
Bra013179.1-P	Field mustard	nucleus	20.99	19.05
Zm00001d040846_P001	Maize	cytosol	27.82	18.7
TraesCS6A01G167100.1	Wheat	cytosol	28.93	18.65
TraesCS6B01G194500.1	Wheat	cytosol	28.78	18.55
TraesCS6D01G155600.1	Wheat	cytosol	28.78	18.55
TraesCS4B01G101500.1	Wheat	cytosol	26.39	18.53
Bra006478.1-P	Field mustard	nucleus	15.58	18.42
Bra013404.1-P	Field mustard	nucleus	13.04	18.39
HORVU6Hr1G033850.1	Barley	cytosol	28.46	18.36
Solyc01g098250.2.1	Tomato	nucleus	28.93	18.33
Os06t0535300-01	Rice	nucleus	29.57	18.27
Os01t0375100-01	Rice	nucleus	29.09	18.15
VIT_14s0030g00640.t01	Wine grape	nucleus	33.7	18.14
HORVU4Hr1G043860.4	Barley	cytosol	27.19	18.02
EES00793	Sorghum	cytosol	27.82	17.91
Bra006476.1-P	Field mustard	nucleus	16.69	17.86
Zm00001d008412_P001	Maize	cytosol	28.46	17.57
KXG32106	Sorghum	cytosol	28.14	17.51
Zm00001d008413_P001	Maize	cytosol	28.3	17.49
TraesCS3B01G244000.4	Wheat	nucleus	28.46	17.31
TraesCS3A01G213800.3	Wheat	nucleus	28.14	17.3
PGSC0003DMT400057904	Potato	nucleus	29.73	17.3
TraesCS3D01G215900.1	Wheat	nucleus	28.14	17.29
Os11t0578100-00	Rice	cytosol	28.93	17.28
EER88793	Sorghum	cytosol	25.91	17.19
KXG28768	Sorghum	nucleus	26.55	17.13
Zm00001d019461_P002	Maize	cytosol	29.73	16.76
Solyc01g098330.1.1	Tomato	nucleus	10.81	16.59
Os11t0573800-00	Rice	nucleus	24.17	16.56
OQU83710	Sorghum	cytosol	25.6	16.53
HORVU7Hr1G050080.1	Barley	nucleus	26.87	16.34
TraesCS2A01G084900.1	Wheat	nucleus	26.87	16.34
Bra013403.1-P	Field mustard	nucleus	13.99	16.24
EER98396	Sorghum	nucleus	28.93	15.95
EES09993	Sorghum	nucleus	27.82	15.87
HORVU3Hr1G051850.2	Barley	nucleus	28.3	15.74
TraesCS2B01G099600.2	Wheat	nucleus	27.03	15.5
TraesCS1D01G042900.1	Wheat	nucleus	29.25	15.44
TraesCS2D01G078000.1	Wheat	cytosol	15.74	15.4
TraesCS2D01G082800.1	Wheat	nucleus	26.87	15.38
TraesCS1B01G054900.1	Wheat	nucleus	29.09	15.35
TraesCS1A01G042500.1	Wheat	nucleus	28.62	15.13
Os11t0574200-00	Rice	cytosol	7.79	14.98
Bra006473.1-P	Field mustard	plastid	16.69	14.94
OQU83709	Sorghum	cytosol	27.5	14.89
HORVU1Hr1G008940.2	Barley	nucleus	28.3	14.86
TraesCS4A01G214500.1	Wheat	nucleus	15.58	14.63
Bra039474.1-P	Field mustard	nucleus	34.5	14.22
Solyc01g098340.2.1	Tomato	cytosol	17.81	14.0
PGSC0003DMT400057887	Potato	cytosol	17.96	13.42
Zm00001d052947_P001	Maize	plastid	17.17	12.49
TraesCS2A01G080400.1	Wheat	cytosol	15.58	12.17
HORVU2Hr1G084660.1	Barley	cytosol	16.53	11.95
HORVU2Hr1G013270.2	Barley	cytosol	15.42	11.16
TraesCS2A01G347700.1	Wheat	mitochondrion	16.22	11.1
TraesCS2D01G077700.1	Wheat	cytosol	15.1	11.01
TraesCS2B01G095100.1	Wheat	cytosol	15.1	11.0
TraesCS2B01G366100.1	Wheat	cytosol	16.06	10.99
OQU83714	Sorghum	cytosol, nucleus, plastid	18.28	10.89
Bra041167.1-P	Field mustard	cytosol, nucleus, plastid	1.11	10.77
Bra002182.1-P	Field mustard	nucleus	15.1	8.76
Bra006477.1-P	Field mustard	cytosol	17.33	7.93
TraesCS2D01G077900.1	Wheat	cytosol	6.52	7.59
Bra002184.1-P	Field mustard	cytosol	1.11	2.67

Protein Annotations

Gene3D:1.10.287.110	MapMan:35.2	EnsemblPlantsGene:Bra009972	EnsemblPlants:Bra009972.1	EnsemblPlants:Bra009972.1-P	InterPro:DUF3444
InterPro:DnaJ_domain	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M4D0H4	PFAM:PF00226
PFAM:PF11926	PRINTS:PR00625	PFscan:PS50076	PANTHER:PTHR45089	SMART:SM00271	SUPFAM:SSF46565
UniParc:UPI000253F516	SEG:seg	:	:	:	:

Description

AT5G27240 (E=3e-091) | DNAJ heat shock N-terminal domain-containing protein

Coordinates

chrA06:-:18397717..18399606

Molecular Weight (calculated)

69940.2 Da

IEP (calculated)

7.855

GRAVY (calculated)

-0.769

Length

629 amino acids

Sequence
(BLAST)

001: MECNKEEATR AKKMAEDSMR KGDYPKAHNL VTKAQNLFSG LDGLPQMLAV CDVHCSAEKK LNGLENWYGI LQAMHFCDDA TIKKQYRKLA LLLHPDKNQF
101: PGAEAAFKLI GEASRLLSDK EKRTQYDIRH RIYSRVVSRQ VDANSGLQCG SANRNVGSTG TQQGSVATEV DKKVPSNKNG GGGENQNAEV RKPKLEEEPM
201: KNCGAEGKMN NSAELKPQPA VAEPEQSASK PVHDESVSRS SQAPSVSKDK RKRGKIVEEP LESTNVTFSD VLEDKSNPKD NIRRKSPRRS QQASCREKGR
301: SGDAISPATK RSRSCDKTSK AHEARGEGMD SPDQDFNDFE LTIGCFAVNQ VWSLYDPTDG MPRYYARITK VIDSDSEFKL GITWLDSLQD YNDNSIPIAC
401: GIFQESESQE VDDYFIFSCE MLHMRRDNNI AIYPRAGEVW AVFRGWDVSW SGGSSESRKG TYEYDFVEVL CEFEDENGLG VAYLGKVEGF VSLFRRDAKC
501: GVLQFQIPAN EMLRFSHKVP SFKMTGRESE GVPPGCFELD IAALPKDMFE VANQEMESVK KVKKSVKAVD GLKLRKSPRL VSETNKQAAS RVGQEKAEKK
601: SAKRGASCGQ PNGSRLSDET KETCKSHCG

Best Arabidopsis Sequence Match ( AT5G27240.3 )
(BLAST)

0001: MDWNKEEACR AKTLAEDKMK EGDFVGAQKL LLKAQSLFSG LESLPQMLAV CDVHNSAEKK INCLENWYGI LQVMHFADDA TIKKQVRKLA LLLHPDKNQF
0101: PGAEAAFKLV WDASRFLADK DKRSQYDIRR RIYLRLATNQ LNANSGLQCA ATNSATDTFW TCCEHCGYRY KYLRKYVNIL LNCNICQRSY MAYDTGFNEA
0201: PSKSNTGQKE VQNQGPCNTS LNTNGESIGA QPGSVAAEVD KKGTFNKKFN KRNGGGESKK TEVKNSKIET EFVRNDDEEK MKSAAKLHKP HPEVTEPEIG
0301: ASKSVPDESV SRSDEAPSTS KDKNKMKKGV EESINVDGSD FIKDKAYSKD NNKRKSPRRS QQSSYAEEEK ISDNSLGPPK KRLRSNVGLK SEQTTRKGLV
0401: GVGSSKRFDS GGGSSAPSCA FKRKAKKFVD SGYQEISSVK DKEREVRKAS GEGVVMEAKI DNNHNPNENL ITEDLPDPEF SNFELTTSCF GVNQVWSMYD
0501: PIDGMPRLYA RIDKVLVPEF KLWITWIDPL QDNKDNSIPI ACGIFQGGGS EEENDHLKFS CQMFHLTRNN SVVIYPRKGE IWAIFRGWDI SWSASSENHK
0601: HPYEYDFVEV LSNFNDENGL GVGFLGKVEG FVSLFRQDAQ DGVLQLQIPP SQMLRFSHKV PSFKMTGKER EGVPPGCFEL DPAALPKELF EVYDSKVDVG
0701: LDRELPNGKT GGPFPEASKV EMQANTTRES SPFKKKRPKV HDNHGSFSKE SDGRRTNHER NSAKESRKSV KAVDALNLRK SPRLLSETNS QANSRSGRQI
0801: AEKKSANNGE SCGKPGGLSL SGEKMSEKTI TRMRKTPQDI HKPTVNVKKH GRNDESLSQS RGDGLLTQLN GNMKSSEPET RVPSSCKTVK ENTFNFENQR
0901: SWDKFQIDQI WAIYSNDKGS PRKYAQIKKI DTSPEFKLHV APLELYRPPI HMPRPVCCGR FKLKTGKAEV YVPSSFSHQV KAVKTKKNRF EVYPGKGEIW
1001: ALYKNCNTRD YTETEELEIV EVVETDEQRI QAMTLTAKGF NNKPLYRRSE ESNASFIDIP KTEVCRFSHQ IPAFRHESRA TRFGDGQYWE LDLKAVLGLN
1101: LKNP

Arabidopsis Description

DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4K2V2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.