Factsheet for TraesCS6B01G194500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G155600.1	Wheat	cytosol	98.67	98.67
TraesCS6A01G167100.1	Wheat	cytosol	98.67	98.67
HORVU6Hr1G033850.1	Barley	cytosol	94.26	94.36
Os06t0535300-01	Rice	nucleus	67.11	64.34
KXG32106	Sorghum	cytosol	63.63	61.42
Zm00001d008413_P001	Maize	cytosol	63.83	61.2
Zm00001d008412_P001	Maize	cytosol	62.5	59.86
TraesCS2B01G095100.1	Wheat	cytosol	42.73	48.26
TraesCS2B01G366100.1	Wheat	cytosol	45.18	47.99
GSMUA_Achr11P...	Banana	nucleus	30.12	44.95
PGSC0003DMT400057888	Potato	cytosol	9.02	44.44
GSMUA_Achr2P02410_001	Banana	cytosol	31.66	39.92
CDX74107	Canola	cytosol	10.86	39.55
GSMUA_Achr5P00460_001	Banana	cytosol	28.48	38.24
Bra039476.1-P	Field mustard	cytosol	7.79	36.89
VIT_05s0020g02050.t01	Wine grape	nucleus	31.56	36.89
CDY13919	Canola	nucleus	17.83	36.86
PGSC0003DMT400089411	Potato	cytosol	8.2	35.71
KRH11282	Soybean	nucleus	34.84	35.12
KRH21004	Soybean	nucleus	34.43	34.71
Bra001194.1-P	Field mustard	cytosol	7.17	34.65
CDX74108	Canola	cytosol	7.17	34.65
KRH50936	Soybean	nucleus	33.3	33.92
CDY24701	Canola	nucleus	20.39	33.79
KRH34004	Soybean	cytosol	10.96	33.65
CDX92582	Canola	nucleus	28.89	33.49
CDY08056	Canola	nucleus	21.52	33.44
Solyc01g067770.1.1	Tomato	extracellular, vacuole	9.32	33.33
TraesCS3B01G244000.4	Wheat	nucleus	34.84	32.88
CDX88917	Canola	nucleus	11.17	32.83
TraesCS4B01G101500.1	Wheat	cytosol	30.02	32.7
PGSC0003DMT400058792	Potato	nucleus	30.64	32.61
Solyc01g067780.1.1	Tomato	cytosol	29.82	32.23
KRH02180	Soybean	cytosol, nucleus, plastid	33.81	31.61
CDY05255	Canola	nucleus	21.21	31.27
Bra020757.1-P	Field mustard	nucleus	20.7	30.93
PGSC0003DMT400058788	Potato	nucleus	15.27	30.47
Solyc01g098250.2.1	Tomato	nucleus	30.94	30.41
TraesCS2B01G099600.2	Wheat	nucleus	34.02	30.26
KRG92798	Soybean	cytosol	21.93	30.18
PGSC0003DMT400038431	Potato	nucleus	24.08	29.86
CDX99992	Canola	cytosol	28.69	29.76
Solyc08g029220.1.1	Tomato	nucleus	23.98	29.66
Bra002183.1-P	Field mustard	nucleus	17.11	29.4
PGSC0003DMT400094016	Potato	nucleus	8.81	29.35
CDY13918	Canola	nucleus	17.21	29.32
TraesCS1B01G054900.1	Wheat	nucleus	35.76	29.28
CDY19714	Canola	nucleus	28.59	29.0
KRH34003	Soybean	cytosol	8.61	28.87
Bra009972.1-P	Field mustard	nucleus	18.55	28.78
CDX86172	Canola	nucleus	18.55	28.78
PGSC0003DMT400057904	Potato	nucleus	31.66	28.58
CDX80667	Canola	nucleus	19.47	28.57
KRH68628	Soybean	cytosol	30.94	28.3
CDX70837	Canola	mitochondrion	14.55	28.17
KRG96896	Soybean	cytosol	30.53	28.17
Solyc10g007630.1.1	Tomato	cytosol	13.73	27.57
CDX88920	Canola	nucleus	16.6	27.55
Bra006476.1-P	Field mustard	nucleus	16.6	27.55
Bra006479.1-P	Field mustard	cytosol	15.57	27.54
VIT_14s0030g00640.t01	Wine grape	nucleus	32.89	27.46
CDX88918	Canola	cytosol	14.75	27.07
Bra006478.1-P	Field mustard	nucleus	14.75	27.07
CDY27809	Canola	nucleus	27.25	26.81
CDX70843	Canola	extracellular, golgi	14.75	26.62
PGSC0003DMT400054841	Potato	cytosol	13.32	26.32
CDX70840	Canola	nucleus	15.68	26.2
Solyc01g098310.1.1	Tomato	cytosol	12.19	26.1
PGSC0003DMT400086601	Potato	cytosol	5.33	25.87
PGSC0003DMT400057894	Potato	cytosol	10.25	25.77
PGSC0003DMT400057893	Potato	cytosol	12.7	25.62
TraesCS3B01G607500.1	Wheat	cytosol	19.36	25.47
CDX92586	Canola	nucleus	9.12	25.43
TraesCS3B01G475500.1	Wheat	cytosol	19.36	25.1
Solyc01g098340.2.1	Tomato	cytosol	19.98	24.38
TraesCS3B01G470100.1	Wheat	nucleus	17.93	24.1
CDX88924	Canola	plastid	17.21	23.76
Bra006473.1-P	Field mustard	plastid	17.01	23.61
PGSC0003DMT400057887	Potato	cytosol	20.08	23.28
CDY41919	Canola	nucleus, plastid	28.07	23.01
TraesCS2B01G301100.1	Wheat	cytosol	16.39	22.66
TraesCS4B01G319100.1	Wheat	cytosol	16.5	22.61
Bra039477.1-P	Field mustard	plastid	12.4	22.49
Solyc01g098330.1.1	Tomato	nucleus	9.12	21.71
Bra024236.1-P	Field mustard	nucleus	8.09	21.47
CDY27796	Canola	cytosol	11.37	20.98
CDY41935	Canola	cytosol	11.37	20.86
TraesCS5B01G508500.1	Wheat	cytosol	5.84	20.73
CDX92856	Canola	nucleus	9.73	20.21
Bra039461.1-P	Field mustard	cytosol	10.96	20.07
CDY29872	Canola	cytosol	9.02	19.73
CDY27811	Canola	nucleus	9.32	19.0
CDY13917	Canola	endoplasmic reticulum, extracellular, mitochondrion	6.66	15.59
Bra002182.1-P	Field mustard	nucleus	15.88	14.29
CDX70844	Canola	mitochondrion, plasma membrane	12.19	13.93
Bra039474.1-P	Field mustard	nucleus	20.18	12.91
Bra006477.1-P	Field mustard	cytosol	18.03	12.8
CDY41917	Canola	nucleus	12.09	12.34
CDX70841	Canola	nucleus	16.8	11.33
CDX88919	Canola	cytosol	17.52	10.82

Protein Annotations

EnsemblPlants:TraesCS6B01G194500.1	EnsemblPlantsGene:TraesCS6B01G194500	Gene3D:1.10.287.110	InterPro:DUF3444	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR45089	PFAM:PF00226	PFAM:PF11926	PFscan:PS50076
PRINTS:PR00625	SEG:seg	SMART:SM00271	SUPFAM:SSF46565	TIGR:cd06257	MapMan:35.2

Description

No Description!

Coordinates

chr6B:-:229278445..229281375

Molecular Weight (calculated)

108659.0 Da

IEP (calculated)

6.368

GRAVY (calculated)

-0.666

Length

976 amino acids

Sequence
(BLAST)

001: MDCNKEEAIR AKALAERKLL EKDFVGAKKL IIKAQQLFSE IDNISQMLTV CDVHCAAGTK VNGELDWYGI LQVPAFTNDD TLIKKQYRKL ALLLHPDKNK
101: FAGAESAFKL VGEANMTLTD SSKRSAYDMK RRVSVRVGAA RPSPYQQSRR AAPVRPVNLH QPSNSAGTQQ TFWTMCSSCG MRYQYYTAML KKAIRCQSCL
201: KPFIAHDINE QAVPSGADRQ YAGVKNAGAP QNFAGRQTNA PGQQAWNNAT PGVHANYGSH KAAANSNKKK GEDGNSASAA GVPNEKAKFA RTSKGSSAAG
301: LKRGRRAVSE SSDSETTTDS EEEITVDGAA ANNAKPSQHS RRSSRQKQEV KYKEESEDED IGDDGNDDDD NNVSSSNFKR LRKGGVLHGD DQSSTPKFDE
401: DNTGHNGHTN GLNHEKEETS NSVSSNGLDP NLDDASDEEK FSCADPEFFN FDELRDVSQF RPNQIWAVYD SHGCMPRFYA RITKVKMAPK FIVHFVWLEL
501: DPTNEAELAW SRAELPVACG HFKHGTSDTA KEANMFSQTI SCAKSKTKNS YEIYPRKDEV WALHKGWDIS WSSDADSHTD FEYELVQVVS DFTTGTSIIV
601: VPLVKIKGFV SLFMQSKEAT PCVIPQDNTL RFSHCVPHHF MRGTEREGIP EGAIELDPAA LPLNLEEAFA SVVLESTVKG KGVDTKYAGS SSGINSSKGS
701: EKVGEVPHAT CMNTGLFTRA TKEENKEHHT PSTVEVVDVN EDSDGIVQDE FECPDSEFYE FTEIRSIQKF EPGQIWALYS DMDKFPNYYA IIKKVDLKNN
801: KVQVKWLDLC PRGEEEKRLT GKEDRTLACG IFKVSSGNDG TTTYTGTESF SHPVVARSTG RKNEYEIIPR FRDIWAVYKN WRAGWTAEDF KNCEYEFVEI
901: VGQTDSSIQV QPLGKVDGYR AVFRRGADVK TISKDEYPKF AHHVPCFHLT NEKAGKLRGC FELDPYSVPE VFLYTS

Best Arabidopsis Sequence Match ( AT5G18750.1 )
(BLAST)

001: MSNKDEALRA KDLAEDWMSK SDFTTARRIA IKAQKMDATL ESVVARMIMV CDVHCAALEK SGDETDWYKI LQVEQTADEN TIKKQYKKLA LHLHPDKNKL
101: PGAESAFKTI GEAQRVLLDK DKRRFHDMRR KPVFRRPAPA PAPAPSFQPP QQAPTTPFFT QRGFQTNVNV ARKRPENQKK PQAQPTGFDG LASFTTSCAF
201: CHRKYEYQRK LINTLMTCLN CGKQYVAFQE TFQPPVQPTF SFFQQSKVPT QEAGKAVEKQ PESCAKSFFS KEGSRAKSSG VSAENINGKR KRKKVVESSD
301: SSCSESSIDC NEVPAGGQDS GSSGAQHSRR SVRSKQQVSY KEDKEEDAES AEESDFRKKS HEDQPFTETL PNGLNRTKKS KAAKNSSSGS ASDAEIQCTD
401: PDFSNFEKSR EVTCFKAGQT WAIYDDMGGM PRYYAIIRKV IRKPSFMLKI QWLEAEPDDE KANLWVRKNL PISIGKFKLG GNENIEKTPC FSHMIYFKVG
501: SMKDTVRVYP RIGETWALFK NWDINWSSGR RRSSHEHEYE YEFVEILSEY VEGVAIQVAF LRKIKGFTSV FCRIAPGGGS DTIQIPPHEL LRFSHSIPST
601: KLTGKEGNGV PIGSYEFDTA ALPQKIEQEE AVPVLRESAK LNQVNHNSPP SSEPDCIVIP NFQFNNFSAE RLEGKFAPGQ IWSLNSKEDG LPKCYAKIQQ
701: IVWRPVFKLQ INRLEPKSLL ENVIQWHDKR MPVSCGNFTL KEGRDETLTK VTDFSHQIKA EKHFRINEYI VVPKTGEIWA MYKNWSETIK ATSLKRCEYE
801: VVEVLDDNDS HIEVMLLEQV DGFISVFKEK LEGGIDVKKK IPRCELLRFS HYVPAFRLTG ERDGALRGYV ELDPSAFPLN LRRS

Arabidopsis Description

DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q3E9D9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.