Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G084900.1 | Wheat | nucleus | 89.79 | 95.26 |
| TraesCS2D01G082800.1 | Wheat | nucleus | 94.8 | 94.63 |
| HORVU7Hr1G050080.1 | Barley | nucleus | 85.23 | 90.43 |
| Os11t0578100-00 | Rice | cytosol | 59.8 | 62.3 |
| Os11t0574200-00 | Rice | cytosol | 16.5 | 55.35 |
| EES09993 | Sorghum | nucleus | 52.42 | 52.13 |
| TraesCS4B01G101500.1 | Wheat | cytosol | 41.57 | 50.89 |
| Zm00001d052947_P001 | Maize | plastid | 39.29 | 49.83 |
| KXG28768 | Sorghum | nucleus | 43.57 | 49.03 |
| TraesCS3B01G244000.4 | Wheat | nucleus | 45.31 | 48.07 |
| OQU83709 | Sorghum | cytosol | 44.21 | 41.74 |
| PGSC0003DMT400057888 | Potato | cytosol | 7.47 | 41.41 |
| Bra039476.1-P | Field mustard | cytosol | 7.29 | 38.84 |
| CDX74108 | Canola | cytosol | 6.75 | 36.63 |
| CDX74107 | Canola | cytosol | 8.93 | 36.57 |
| Bra001194.1-P | Field mustard | cytosol | 6.65 | 36.14 |
| VIT_05s0020g02050.t01 | Wine grape | nucleus | 27.35 | 35.93 |
| PGSC0003DMT400089411 | Potato | cytosol | 7.2 | 35.27 |
| Solyc01g067770.1.1 | Tomato | extracellular, vacuole | 8.57 | 34.43 |
| TraesCS6B01G194500.1 | Wheat | cytosol | 30.26 | 34.02 |
| CDY13919 | Canola | nucleus | 14.04 | 32.63 |
| CDX88917 | Canola | nucleus | 9.85 | 32.53 |
| Solyc01g067780.1.1 | Tomato | cytosol | 26.71 | 32.45 |
| PGSC0003DMT400058792 | Potato | nucleus | 26.89 | 32.17 |
| KRH11282 | Soybean | nucleus | 27.89 | 31.61 |
| KRH21004 | Soybean | nucleus | 27.62 | 31.3 |
| KRH50936 | Soybean | nucleus | 27.16 | 31.11 |
| CDY08056 | Canola | nucleus | 17.5 | 30.57 |
| CDX92582 | Canola | nucleus | 23.43 | 30.52 |
| PGSC0003DMT400086601 | Potato | cytosol | 5.56 | 30.35 |
| CDY13918 | Canola | nucleus | 15.68 | 30.02 |
| CDY24701 | Canola | nucleus | 16.04 | 29.88 |
| KRH34004 | Soybean | cytosol | 8.66 | 29.87 |
| PGSC0003DMT400058788 | Potato | nucleus | 13.31 | 29.86 |
| Solyc01g098250.2.1 | Tomato | nucleus | 26.98 | 29.81 |
| Bra006478.1-P | Field mustard | nucleus | 14.4 | 29.7 |
| CDX70837 | Canola | mitochondrion | 13.49 | 29.37 |
| KRG92798 | Soybean | cytosol | 18.96 | 29.34 |
| CDX88918 | Canola | cytosol | 14.22 | 29.32 |
| Bra002183.1-P | Field mustard | nucleus | 15.13 | 29.23 |
| CDX70843 | Canola | extracellular, golgi | 14.13 | 28.65 |
| Solyc08g029220.1.1 | Tomato | nucleus | 20.51 | 28.52 |
| PGSC0003DMT400094016 | Potato | nucleus | 7.57 | 28.33 |
| PGSC0003DMT400038431 | Potato | nucleus | 20.24 | 28.21 |
| PGSC0003DMT400057904 | Potato | nucleus | 27.71 | 28.12 |
| Bra006479.1-P | Field mustard | cytosol | 14.13 | 28.08 |
| KRH02180 | Soybean | cytosol, nucleus, plastid | 26.62 | 27.97 |
| Bra020757.1-P | Field mustard | nucleus | 16.5 | 27.72 |
| CDY05255 | Canola | nucleus | 16.59 | 27.49 |
| KRH34003 | Soybean | cytosol | 7.29 | 27.49 |
| VIT_14s0030g00640.t01 | Wine grape | nucleus | 29.26 | 27.46 |
| KRG96896 | Soybean | cytosol | 26.34 | 27.32 |
| KRH68628 | Soybean | cytosol | 26.34 | 27.09 |
| Bra009972.1-P | Field mustard | nucleus | 15.5 | 27.03 |
| CDX86172 | Canola | nucleus | 15.5 | 27.03 |
| CDX99992 | Canola | cytosol | 23.15 | 26.99 |
| CDY19714 | Canola | nucleus | 23.43 | 26.72 |
| CDX80667 | Canola | nucleus | 16.04 | 26.47 |
| TraesCS1B01G054900.1 | Wheat | nucleus | 28.44 | 26.17 |
| Solyc10g007630.1.1 | Tomato | cytosol | 11.58 | 26.13 |
| TraesCS2B01G366100.1 | Wheat | cytosol | 21.88 | 26.12 |
| TraesCS2B01G095100.1 | Wheat | cytosol | 20.24 | 25.69 |
| CDX70840 | Canola | nucleus | 13.58 | 25.51 |
| Solyc01g098310.1.1 | Tomato | cytosol | 10.57 | 25.44 |
| PGSC0003DMT400057893 | Potato | cytosol | 11.21 | 25.41 |
| Solyc01g098340.2.1 | Tomato | cytosol | 18.5 | 25.38 |
| TraesCS3B01G475500.1 | Wheat | cytosol | 17.41 | 25.37 |
| PGSC0003DMT400054841 | Potato | cytosol | 11.39 | 25.3 |
| CDY27809 | Canola | nucleus | 22.7 | 25.1 |
| Bra006476.1-P | Field mustard | nucleus | 13.4 | 25.0 |
| CDX88920 | Canola | nucleus | 13.4 | 25.0 |
| CDX88924 | Canola | plastid | 15.68 | 24.33 |
| Bra006473.1-P | Field mustard | plastid | 15.59 | 24.32 |
| PGSC0003DMT400057894 | Potato | cytosol | 8.57 | 24.23 |
| AT5G37760.1 | Thale cress | cytosol | 4.56 | 24.15 |
| CDX92586 | Canola | nucleus | 7.66 | 24.0 |
| TraesCS3B01G607500.1 | Wheat | cytosol | 16.23 | 23.99 |
| PGSC0003DMT400057887 | Potato | cytosol | 18.32 | 23.87 |
| Bra024236.1-P | Field mustard | nucleus | 7.84 | 23.37 |
| TraesCS2B01G301100.1 | Wheat | cytosol | 14.95 | 23.23 |
| TraesCS3B01G470100.1 | Wheat | nucleus | 15.13 | 22.86 |
| CDX92856 | Canola | nucleus | 9.75 | 22.77 |
| AT4G19590.2 | Thale cress | nucleus | 7.66 | 22.46 |
| CDY41935 | Canola | cytosol | 10.85 | 22.37 |
| Bra039461.1-P | Field mustard | cytosol | 10.76 | 22.14 |
| CDY41919 | Canola | nucleus, plastid | 23.61 | 21.75 |
| CDY27796 | Canola | cytosol | 10.48 | 21.74 |
| Solyc01g098330.1.1 | Tomato | nucleus | 8.11 | 21.71 |
| CDY29872 | Canola | cytosol | 8.57 | 21.08 |
| Bra039477.1-P | Field mustard | plastid | 10.21 | 20.82 |
| TraesCS4B01G319100.1 | Wheat | cytosol | 13.49 | 20.79 |
| TraesCS5B01G508500.1 | Wheat | cytosol | 5.2 | 20.73 |
| CDY27811 | Canola | nucleus | 7.93 | 18.16 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 11.21 | 14.4 |
| Bra002182.1-P | Field mustard | nucleus | 13.95 | 14.1 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 5.2 | 13.67 |
| Bra006477.1-P | Field mustard | cytosol | 16.5 | 13.16 |
| Bra039474.1-P | Field mustard | nucleus | 17.87 | 12.84 |
| CDX70841 | Canola | nucleus | 16.04 | 12.16 |
| CDY41917 | Canola | nucleus | 9.66 | 11.09 |
| CDX88919 | Canola | cytosol | 15.77 | 10.94 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G099600.2 | EnsemblPlantsGene:TraesCS2B01G099600 | Gene3D:1.10.287.110 | InterPro:DUF3444 | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS |
| InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR10825 | PANTHER:PTHR10825:SF27 | PFAM:PF00226 |
| PFAM:PF11926 | PFscan:PS50076 | PRINTS:PR00625 | ScanProsite:PS00636 | SEG:seg | SMART:SM00271 |
| SUPFAM:SSF46565 | TIGR:cd06257 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr2B:+:58975929..58979222
Molecular Weight (calculated)
122205.0 Da
IEP (calculated)
7.030
GRAVY (calculated)
-0.599
Length
1097 amino acids
Sequence
(BLAST)
(BLAST)
0001: MMECNREEAS MAREIAVKKL EDKDFAGARK IALKAQMLFP ELENISQLLS VCTVHCAAEA RVNGEPDWYA ILQVEATTDH ANIRKQYLRL AFSLHPDKNC
0101: FPGAEAAFKL VAEAHSILCD QTKRSHYDIR RQYASRKVPK QATQQQKKSG TSKCDVPGYE LTFWTICGHC QMRYQYHNHV LNTLIRCLNC ENNFFAYKYN
0201: LQEQYVPTSS SVPTNSQVPT KTFPSQQGRR VKLSSAQETT GPNPRMNAAQ CDGYMKGYSR PTMGEKASQS RTTSGQSQFS AMNQEKPAVP TANEHMGGWS
0301: IPDPPDPSII GRPKSGRADA SAASNAMNVP SQSRTTSGQS QSSAMSQEKP AVPTANEHMG GWSIPNPPDP SIIDRPKSGR ADASAASNAM NVPGPAKLSS
0401: TSVNTYAKIR INVAERDIKG HDNPSGEKEA NESYTTKGKV KIPAKTESKS SAQTVNMKTG VFDRKNSGIE DVSTVLNAAG SPTLRRSARR TQDADGSSSL
0501: SYNSKKKRRK NTFPANADLN GKQIFDDNVT NADRQSVPSD VSGKVDIQEE AKTPDIGDQD NIRAEVTDTV GQSQPCYSVK LSFPDADFFD FEKLRDASLF
0601: ATGQIWALYD NLDGMPRYYA RIKSLDASNF KVHLTWLERI AMNEAEEKWS DEELPVACGS FSLGTTEISQ DRLMFSHIVS WTKGKRRKYE VHPSKGEVWA
0701: LYKGWNMQWG SDADNHRSYE YEVVEVLSDF SVSAGVTVVP LVRIEGFVCL FATVKEKSEI VVAPSELLRF SHSVPFYRTN GNEKVGVPGG FLELDTACLP
0801: IDLDAAFPCV SLHSYMSPGK KEGSTSIDLS TGSASSRGKH EHISSEPKTS LQKNPNGPNA LGDFSEQNSP SLVYTYPDSE FYNFEECRSC EKFERGQIWA
0901: LYSDVDNFPK FYGWVSKVEL EPFKVYLTWL EACPQAEQEK QWLEQDIPVS CGKFKIRNWT TMYETNDTFS HLVCTGHDPK QQIEIFPQVG EIWVIYMDWT
1001: PDWTPSSPHA CGFGIGEIIE RTEASTKVSL LTQVNGYTAV FKPGKRKRVV EIPTRHNLKF SHRVPSFCLT EENGGKLSGF YELDSASVPD VFLYKHA
0101: FPGAEAAFKL VAEAHSILCD QTKRSHYDIR RQYASRKVPK QATQQQKKSG TSKCDVPGYE LTFWTICGHC QMRYQYHNHV LNTLIRCLNC ENNFFAYKYN
0201: LQEQYVPTSS SVPTNSQVPT KTFPSQQGRR VKLSSAQETT GPNPRMNAAQ CDGYMKGYSR PTMGEKASQS RTTSGQSQFS AMNQEKPAVP TANEHMGGWS
0301: IPDPPDPSII GRPKSGRADA SAASNAMNVP SQSRTTSGQS QSSAMSQEKP AVPTANEHMG GWSIPNPPDP SIIDRPKSGR ADASAASNAM NVPGPAKLSS
0401: TSVNTYAKIR INVAERDIKG HDNPSGEKEA NESYTTKGKV KIPAKTESKS SAQTVNMKTG VFDRKNSGIE DVSTVLNAAG SPTLRRSARR TQDADGSSSL
0501: SYNSKKKRRK NTFPANADLN GKQIFDDNVT NADRQSVPSD VSGKVDIQEE AKTPDIGDQD NIRAEVTDTV GQSQPCYSVK LSFPDADFFD FEKLRDASLF
0601: ATGQIWALYD NLDGMPRYYA RIKSLDASNF KVHLTWLERI AMNEAEEKWS DEELPVACGS FSLGTTEISQ DRLMFSHIVS WTKGKRRKYE VHPSKGEVWA
0701: LYKGWNMQWG SDADNHRSYE YEVVEVLSDF SVSAGVTVVP LVRIEGFVCL FATVKEKSEI VVAPSELLRF SHSVPFYRTN GNEKVGVPGG FLELDTACLP
0801: IDLDAAFPCV SLHSYMSPGK KEGSTSIDLS TGSASSRGKH EHISSEPKTS LQKNPNGPNA LGDFSEQNSP SLVYTYPDSE FYNFEECRSC EKFERGQIWA
0901: LYSDVDNFPK FYGWVSKVEL EPFKVYLTWL EACPQAEQEK QWLEQDIPVS CGKFKIRNWT TMYETNDTFS HLVCTGHDPK QQIEIFPQVG EIWVIYMDWT
1001: PDWTPSSPHA CGFGIGEIIE RTEASTKVSL LTQVNGYTAV FKPGKRKRVV EIPTRHNLKF SHRVPSFCLT EENGGKLSGF YELDSASVPD VFLYKHA
001: MNAQVGVAMG ISQNLEADNN SFLCDSGSAG AVPQKISGCA GLKFNDFDRL REGVKFEAGQ TWAIYNNTVD QMPRLYAQIR KVSAPCFSLR ITYLEPDPDG
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF3444) (TAIR:AT5G18740.1); Has 30201 Blast hits to 17322 proteins in 780 /.../es: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G18730]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.