Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039476.1-P | Field mustard | cytosol | 41.34 | 96.12 |
| CDY41917 | Canola | nucleus | 73.9 | 37.03 |
| PGSC0003DMT400057888 | Potato | cytosol | 15.24 | 36.87 |
| PGSC0003DMT400089411 | Potato | cytosol | 14.61 | 31.25 |
| CDX74108 | Canola | cytosol | 13.15 | 31.19 |
| AT3G04960.3 | Thale cress | cytosol | 33.19 | 26.28 |
| CDY29872 | Canola | cytosol | 23.38 | 25.11 |
| CDX88917 | Canola | nucleus | 16.7 | 24.1 |
| CDX92856 | Canola | nucleus | 22.34 | 22.77 |
| CDY27796 | Canola | cytosol | 23.59 | 21.36 |
| CDY41935 | Canola | cytosol | 23.17 | 20.86 |
| CDX92586 | Canola | nucleus | 14.2 | 19.43 |
| PGSC0003DMT400057894 | Potato | cytosol | 15.45 | 19.07 |
| Solyc10g007630.1.1 | Tomato | cytosol | 18.16 | 17.9 |
| PGSC0003DMT400054841 | Potato | cytosol | 17.95 | 17.41 |
| CDX86172 | Canola | nucleus | 21.29 | 16.22 |
| CDY51818 | Canola | nucleus | 13.15 | 15.91 |
| CDX70837 | Canola | mitochondrion | 16.49 | 15.67 |
| PGSC0003DMT400057893 | Potato | cytosol | 15.45 | 15.29 |
| CDY13918 | Canola | nucleus | 18.16 | 15.18 |
| Solyc01g098330.1.1 | Tomato | nucleus | 12.94 | 15.12 |
| CDX80667 | Canola | nucleus | 20.88 | 15.04 |
| CDX70843 | Canola | extracellular, golgi | 16.91 | 14.97 |
| CDX88918 | Canola | cytosol | 16.49 | 14.85 |
| CDX88920 | Canola | nucleus | 17.95 | 14.63 |
| CDY24701 | Canola | nucleus | 17.75 | 14.43 |
| CDX70840 | Canola | nucleus | 17.54 | 14.38 |
| CDX76994 | Canola | nucleus | 17.33 | 14.26 |
| TraesCS2D01G078000.1 | Wheat | cytosol | 18.79 | 14.0 |
| Solyc01g098310.1.1 | Tomato | cytosol | 13.15 | 13.82 |
| CDY49460 | Canola | nucleus | 18.58 | 13.65 |
| CDY08056 | Canola | nucleus | 17.75 | 13.54 |
| CDY35353 | Canola | cytosol | 17.33 | 13.32 |
| CDY05255 | Canola | nucleus | 18.37 | 13.29 |
| Os11t0574200-00 | Rice | cytosol | 8.98 | 13.15 |
| CDY47298 | Canola | cytosol | 15.87 | 13.01 |
| CDX74632 | Canola | cytosol | 15.87 | 12.95 |
| KRG92798 | Soybean | cytosol | 19.0 | 12.84 |
| CDY19683 | Canola | cytosol | 18.37 | 12.7 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 10.86 | 12.47 |
| GSMUA_Achr11P... | Banana | nucleus | 16.7 | 12.23 |
| CDX76752 | Canola | nucleus | 15.66 | 12.12 |
| TraesCS4A01G214500.1 | Wheat | nucleus | 16.7 | 11.94 |
| Solyc08g029220.1.1 | Tomato | nucleus | 19.62 | 11.91 |
| CDY40464 | Canola | nucleus | 11.9 | 11.88 |
| PGSC0003DMT400038431 | Potato | nucleus | 19.21 | 11.69 |
| CDX99992 | Canola | cytosol | 22.76 | 11.58 |
| CDY11521 | Canola | nucleus | 14.2 | 11.49 |
| CDY32121 | Canola | nucleus | 11.06 | 11.4 |
| CDX88924 | Canola | plastid | 16.49 | 11.17 |
| CDY19714 | Canola | nucleus | 22.34 | 11.12 |
| CDX93081 | Canola | nucleus | 16.08 | 11.11 |
| GSMUA_Achr2P02410_001 | Banana | cytosol | 17.95 | 11.11 |
| Zm00001d052947_P001 | Maize | plastid | 20.04 | 11.1 |
| CDY15046 | Canola | nucleus | 15.87 | 11.01 |
| Solyc01g098340.2.1 | Tomato | cytosol | 18.37 | 11.0 |
| PGSC0003DMT400057887 | Potato | cytosol | 19.0 | 10.81 |
| TraesCS2A01G080400.1 | Wheat | cytosol | 18.16 | 10.81 |
| GSMUA_Achr5P00460_001 | Banana | cytosol | 16.28 | 10.73 |
| CDX92582 | Canola | nucleus | 18.79 | 10.69 |
| HORVU2Hr1G084660.1 | Barley | cytosol | 19.0 | 10.46 |
| HORVU2Hr1G013270.2 | Barley | cytosol | 18.58 | 10.24 |
| TraesCS2B01G366100.1 | Wheat | cytosol | 19.42 | 10.12 |
| TraesCS2D01G077700.1 | Wheat | cytosol | 18.16 | 10.08 |
| CDY60893 | Canola | cytosol | 3.34 | 10.06 |
| CDY60894 | Canola | cytosol | 3.34 | 10.06 |
| TraesCS2A01G347700.1 | Wheat | mitochondrion | 19.21 | 10.01 |
| CDY13919 | Canola | nucleus | 9.81 | 9.96 |
| TraesCS2B01G095100.1 | Wheat | cytosol | 17.95 | 9.95 |
| CDY27809 | Canola | nucleus | 20.46 | 9.88 |
| TraesCS4B01G101500.1 | Wheat | cytosol | 17.95 | 9.6 |
| Os11t0573800-00 | Rice | nucleus | 18.37 | 9.59 |
| Solyc01g098250.2.1 | Tomato | nucleus | 19.83 | 9.57 |
| EES09993 | Sorghum | nucleus | 21.92 | 9.52 |
| Os06t0535300-01 | Rice | nucleus | 19.83 | 9.33 |
| TraesCS6B01G194500.1 | Wheat | cytosol | 19.0 | 9.32 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 16.49 | 9.25 |
| TraesCS6A01G167100.1 | Wheat | cytosol | 18.79 | 9.22 |
| EES08665 | Sorghum | nucleus | 12.94 | 9.13 |
| TraesCS6D01G155600.1 | Wheat | cytosol | 18.58 | 9.12 |
| HORVU6Hr1G033850.1 | Barley | cytosol | 18.37 | 9.03 |
| KRG96896 | Soybean | cytosol | 19.83 | 8.98 |
| Zm00001d040846_P001 | Maize | cytosol | 17.54 | 8.97 |
| Zm00001d008413_P001 | Maize | cytosol | 19.0 | 8.94 |
| KRH68628 | Soybean | cytosol | 19.83 | 8.9 |
| HORVU4Hr1G043860.4 | Barley | cytosol | 17.54 | 8.85 |
| Zm00001d008412_P001 | Maize | cytosol | 18.79 | 8.83 |
| KXG32106 | Sorghum | cytosol | 18.58 | 8.8 |
| EER88793 | Sorghum | cytosol | 17.33 | 8.76 |
| Os01t0375100-01 | Rice | nucleus | 18.16 | 8.63 |
| HORVU7Hr1G050080.1 | Barley | nucleus | 18.58 | 8.61 |
| PGSC0003DMT400057904 | Potato | nucleus | 19.42 | 8.6 |
| EES00793 | Sorghum | cytosol | 17.54 | 8.6 |
| TraesCS2A01G084900.1 | Wheat | nucleus | 18.16 | 8.41 |
| CDY41919 | Canola | nucleus, plastid | 20.88 | 8.4 |
| TraesCS3A01G213800.3 | Wheat | nucleus | 17.75 | 8.31 |
| TraesCS3D01G215900.1 | Wheat | nucleus | 17.75 | 8.3 |
| Os11t0578100-00 | Rice | cytosol | 18.16 | 8.26 |
| TraesCS3B01G244000.4 | Wheat | nucleus | 17.54 | 8.12 |
| TraesCS2B01G099600.2 | Wheat | nucleus | 18.16 | 7.93 |
| KXG28768 | Sorghum | nucleus | 16.08 | 7.9 |
| TraesCS2D01G082800.1 | Wheat | nucleus | 17.95 | 7.83 |
| OQU83710 | Sorghum | cytosol | 15.45 | 7.6 |
| TraesCS2D01G077900.1 | Wheat | cytosol | 8.56 | 7.59 |
| HORVU3Hr1G051850.2 | Barley | nucleus | 17.33 | 7.34 |
| EER98396 | Sorghum | nucleus | 17.33 | 7.27 |
| OQU83714 | Sorghum | cytosol, nucleus, plastid | 15.87 | 7.2 |
| Zm00001d019461_P002 | Maize | cytosol | 16.7 | 7.17 |
| OQU83709 | Sorghum | cytosol | 16.7 | 6.88 |
| CDY34931 | Canola | cytosol | 3.13 | 6.67 |
| TraesCS1B01G054900.1 | Wheat | nucleus | 16.28 | 6.54 |
| TraesCS1A01G042500.1 | Wheat | nucleus | 16.08 | 6.47 |
| TraesCS1D01G042900.1 | Wheat | nucleus | 16.08 | 6.46 |
| HORVU1Hr1G008940.2 | Barley | nucleus | 16.08 | 6.43 |
| CDX74082 | Canola | cytosol | 2.71 | 5.75 |
| CDX70841 | Canola | nucleus | 16.28 | 5.39 |
| CDX92583 | Canola | mitochondrion, plastid | 3.76 | 5.19 |
| CDX88919 | Canola | cytosol | 17.12 | 5.19 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 2.09 | 4.55 |
| CDY12569 | Canola | cytosol | 2.09 | 2.79 |
| CDX78941 | Canola | nucleus | 3.13 | 2.72 |
| CDX99362 | Canola | nucleus | 1.46 | 2.46 |
| CDX76474 | Canola | cytosol | 1.04 | 2.08 |
| CDY60890 | Canola | cytosol | 1.04 | 2.07 |
| CDY12382 | Canola | nucleus | 1.46 | 1.91 |
| CDY27107 | Canola | nucleus | 1.46 | 1.91 |
| CDX92584 | Canola | mitochondrion | 1.25 | 1.72 |
| CDX74107 | Canola | cytosol | 0.63 | 1.12 |
| CDY08035 | Canola | cytosol | 0.21 | 1.01 |
| CDX99361 | Canola | cytosol | 0.21 | 0.68 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 0.21 | 0.57 |
| CDX76475 | Canola | cytosol | 0.21 | 0.49 |
| KRH34003 | Soybean | cytosol | 0.21 | 0.34 |
| CDX76473 | Canola | cytosol | 0.0 | 0.0 |
| CDX76476 | Canola | cytosol | 0.0 | 0.0 |
| CDX78942 | Canola | cytosol | 0.0 | 0.0 |
| CDX99360 | Canola | cytosol | 0.0 | 0.0 |
| CDY09330 | Canola | cytosol | 0.0 | 0.0 |
| CDY31307 | Canola | cytosol | 0.0 | 0.0 |
| KRH34004 | Soybean | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY27811 | EnsemblPlantsGene:GSBRNA2T00038620001 | InterPro:DUF3444 | ncoils:Coil | PANTHER:PTHR10825 | PANTHER:PTHR10825:SF4 |
| PFAM:PF11926 | ProteinID:CDY27811 | ProteinID:CDY27811.1 | SEG:seg | UniParc:UPI0004EF0043 | UniProt:A0A078GQV8 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA05g32200DBnaA05g32200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GQV8]
Coordinates
chrLK032209:-:539327..540874
Molecular Weight (calculated)
56732.4 Da
IEP (calculated)
4.895
GRAVY (calculated)
-0.971
Length
479 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDLSGQVRE YKEMMVESVR KQSLEMEEKE KESDLRRSLE AELLMLVLEM QMVEEVEREF RVREEKLEER EEDFELKAKD VEVKRKELEK ERRLLDETFK
101: ERSNEMEKRE EEFQLKAKDV EVKRKELELK EKSVEEIMSE VEAREKVQRL LDETIKEKSN EMEKREEKFQ LRQDSEAKEI EAKMRSLELK EKELQRKEKE
201: LDELSKQTES RKRSREEPET SLFAENDPLT HSVKRLKSIR EHNHEDREKE TDLECDPEPY NCLDADFNNF NNTMSSFSVG QVWALYDPLD HMPRLYAKIK
301: KVLELEMRVE VTWLESKQKS HIPISCGEFK YGERTVKSHL TFSHLMDHIG GTGKKKKSII TINPRKGETW ALFRDWKKQQ KRPYSYDFVQ VVSELDSGGI
401: GVAYLGRVEG FTSVYELAEQ NGILQMMVTC DEMLRFSHRV PSFVLTGDER KGVPAGSFEL DPAAIPRDYL EASEVKQEE
101: ERSNEMEKRE EEFQLKAKDV EVKRKELELK EKSVEEIMSE VEAREKVQRL LDETIKEKSN EMEKREEKFQ LRQDSEAKEI EAKMRSLELK EKELQRKEKE
201: LDELSKQTES RKRSREEPET SLFAENDPLT HSVKRLKSIR EHNHEDREKE TDLECDPEPY NCLDADFNNF NNTMSSFSVG QVWALYDPLD HMPRLYAKIK
301: KVLELEMRVE VTWLESKQKS HIPISCGEFK YGERTVKSHL TFSHLMDHIG GTGKKKKSII TINPRKGETW ALFRDWKKQQ KRPYSYDFVQ VVSELDSGGI
401: GVAYLGRVEG FTSVYELAEQ NGILQMMVTC DEMLRFSHRV PSFVLTGDER KGVPAGSFEL DPAAIPRDYL EASEVKQEE
001: MLSTERTKFR SMEPATSSPL PRDTSEQDPA LAQSEDQSQG RFGFLKQRAM EKEVSVRNQI LELEKKEERL RLVEERERKI EASFSTLQEK GNESDLILLM
101: EANVMRLVLQ MQFEQVVVAQ LNAQENFLGS LHDSMMKKHE ELMTELEARK NEVALISKTI DAKTCDLDMK VKDFDLKQTT ESERMRKETE LMETSLKQLE
201: ARENELRLLN ETIQGKSMEL EKKEVNFQLK HEAAARETEV KNKFLELKEK KLEEREQHLE LKQRKKEKPA IRAETRKRSR LEYESPLSAE KGRYAETLIR
301: PGKKQVQKRE AHEIIYIDED EPFNCPDPDF HDFNNTMSSF AVGQVWALYD PVDDMPRYYA EIRKVLQPQL SLRVTWLESL QTTEEPIPAC GRFEHGKSET
401: SSHLMFSHEM YHTIRGQYVT INPRKGETWA LFGDWTKTWK SHSEQQKTPY SYDFVEVVTE FDSDRGIGVA YLGRVEGFTS VYERAAQNGL VEIMISCDEM
501: LRFSHRVPSF KMTGDEKEGV PAGSFELDPA AVPRVYLKDA KVKEEKMEPI VLV
101: EANVMRLVLQ MQFEQVVVAQ LNAQENFLGS LHDSMMKKHE ELMTELEARK NEVALISKTI DAKTCDLDMK VKDFDLKQTT ESERMRKETE LMETSLKQLE
201: ARENELRLLN ETIQGKSMEL EKKEVNFQLK HEAAARETEV KNKFLELKEK KLEEREQHLE LKQRKKEKPA IRAETRKRSR LEYESPLSAE KGRYAETLIR
301: PGKKQVQKRE AHEIIYIDED EPFNCPDPDF HDFNNTMSSF AVGQVWALYD PVDDMPRYYA EIRKVLQPQL SLRVTWLESL QTTEEPIPAC GRFEHGKSET
401: SSHLMFSHEM YHTIRGQYVT INPRKGETWA LFGDWTKTWK SHSEQQKTPY SYDFVEVVTE FDSDRGIGVA YLGRVEGFTS VYERAAQNGL VEIMISCDEM
501: LRFSHRVPSF KMTGDEKEGV PAGSFELDPA AVPRVYLKDA KVKEEKMEPI VLV
Arabidopsis Description
Trichohyalin, putative (DUF3444) [Source:UniProtKB/TrEMBL;Acc:F4J631]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.