Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002183.1-P | Field mustard | nucleus | 87.09 | 87.85 |
| CDX92583 | Canola | mitochondrion, plastid | 47.29 | 78.1 |
| CDX88917 | Canola | nucleus | 34.03 | 58.73 |
| CDX88918 | Canola | cytosol | 50.96 | 54.89 |
| CDX70837 | Canola | mitochondrion | 47.82 | 54.37 |
| CDX70843 | Canola | extracellular, golgi | 50.09 | 53.05 |
| AT5G18740.1 | Thale cress | nucleus | 39.09 | 52.09 |
| PGSC0003DMT400057888 | Potato | cytosol | 16.4 | 47.47 |
| CDX70840 | Canola | nucleus | 44.5 | 43.66 |
| CDX88920 | Canola | nucleus | 43.98 | 42.86 |
| CDX88924 | Canola | plastid | 51.31 | 41.58 |
| PGSC0003DMT400089411 | Potato | cytosol | 15.88 | 40.62 |
| CDX74108 | Canola | cytosol | 13.96 | 39.6 |
| CDX92586 | Canola | nucleus | 23.04 | 37.71 |
| PGSC0003DMT400057894 | Potato | cytosol | 17.1 | 25.26 |
| CDX70844 | Canola | mitochondrion, plasma membrane | 37.17 | 24.94 |
| CDX92582 | Canola | nucleus | 35.95 | 24.47 |
| CDY13917 | Canola | endoplasmic reticulum, extracellular, mitochondrion | 17.28 | 23.74 |
| GSMUA_Achr11P... | Banana | nucleus | 26.0 | 22.78 |
| PGSC0003DMT400057893 | Potato | cytosol | 19.2 | 22.73 |
| TraesCS4A01G214500.1 | Wheat | nucleus | 26.53 | 22.69 |
| CDY13919 | Canola | nucleus | 18.67 | 22.67 |
| GSMUA_Achr5P00460_001 | Banana | cytosol | 28.45 | 22.42 |
| Os11t0574200-00 | Rice | cytosol | 12.74 | 22.32 |
| PGSC0003DMT400054841 | Potato | cytosol | 19.2 | 22.27 |
| Solyc10g007630.1.1 | Tomato | cytosol | 18.85 | 22.22 |
| Solyc01g098340.2.1 | Tomato | cytosol | 30.89 | 22.12 |
| GSMUA_Achr2P02410_001 | Banana | cytosol | 29.84 | 22.09 |
| PGSC0003DMT400057887 | Potato | cytosol | 31.06 | 21.14 |
| CDX70841 | Canola | nucleus | 52.88 | 20.94 |
| CDY60893 | Canola | cytosol | 5.76 | 20.75 |
| CDY60894 | Canola | cytosol | 5.76 | 20.75 |
| Solyc01g098330.1.1 | Tomato | nucleus | 14.31 | 20.0 |
| Solyc01g098310.1.1 | Tomato | cytosol | 15.71 | 19.74 |
| CDX88919 | Canola | cytosol | 52.53 | 19.04 |
| Zm00001d040846_P001 | Maize | cytosol | 30.89 | 18.91 |
| Solyc01g098250.2.1 | Tomato | nucleus | 32.11 | 18.53 |
| TraesCS4B01G101500.1 | Wheat | cytosol | 28.97 | 18.53 |
| CDY24701 | Canola | nucleus | 19.02 | 18.51 |
| CDY27811 | Canola | nucleus | 15.18 | 18.16 |
| CDY05255 | Canola | nucleus | 20.94 | 18.13 |
| CDX92856 | Canola | nucleus | 14.83 | 18.09 |
| Os01t0375100-01 | Rice | nucleus | 31.76 | 18.06 |
| EES00793 | Sorghum | cytosol | 30.72 | 18.01 |
| HORVU2Hr1G084660.1 | Barley | cytosol | 27.23 | 17.93 |
| EER88793 | Sorghum | cytosol | 29.49 | 17.83 |
| CDY41935 | Canola | cytosol | 16.4 | 17.67 |
| HORVU2Hr1G013270.2 | Barley | cytosol | 26.7 | 17.61 |
| CDY08056 | Canola | nucleus | 19.2 | 17.52 |
| CDX86172 | Canola | nucleus | 19.2 | 17.49 |
| PGSC0003DMT400057904 | Potato | nucleus | 32.98 | 17.48 |
| KRG92798 | Soybean | cytosol | 21.47 | 17.35 |
| TraesCS2D01G077700.1 | Wheat | cytosol | 26.0 | 17.27 |
| CDY29872 | Canola | cytosol | 13.44 | 17.26 |
| Zm00001d052947_P001 | Maize | plastid | 26.0 | 17.23 |
| CDX99992 | Canola | cytosol | 28.27 | 17.22 |
| TraesCS6A01G167100.1 | Wheat | cytosol | 29.32 | 17.21 |
| TraesCS6B01G194500.1 | Wheat | cytosol | 29.32 | 17.21 |
| TraesCS2A01G347700.1 | Wheat | mitochondrion | 27.57 | 17.19 |
| Os11t0578100-00 | Rice | cytosol | 31.59 | 17.19 |
| CDY19714 | Canola | nucleus | 28.8 | 17.15 |
| TraesCS2B01G366100.1 | Wheat | cytosol | 27.4 | 17.08 |
| HORVU6Hr1G033850.1 | Barley | cytosol | 28.97 | 17.03 |
| TraesCS2B01G095100.1 | Wheat | cytosol | 25.65 | 17.01 |
| CDY27796 | Canola | cytosol | 15.71 | 17.01 |
| TraesCS3A01G213800.3 | Wheat | nucleus | 30.37 | 17.01 |
| TraesCS6D01G155600.1 | Wheat | cytosol | 28.97 | 17.01 |
| HORVU4Hr1G043860.4 | Barley | cytosol | 28.1 | 16.97 |
| KRG96896 | Soybean | cytosol | 31.24 | 16.92 |
| TraesCS3D01G215900.1 | Wheat | nucleus | 30.19 | 16.89 |
| TraesCS3B01G244000.4 | Wheat | nucleus | 30.19 | 16.73 |
| Os06t0535300-01 | Rice | nucleus | 29.67 | 16.7 |
| CDX80667 | Canola | nucleus | 19.37 | 16.69 |
| KRH68628 | Soybean | cytosol | 31.06 | 16.68 |
| TraesCS2A01G084900.1 | Wheat | nucleus | 30.02 | 16.63 |
| OQU83710 | Sorghum | cytosol | 28.1 | 16.53 |
| KXG32106 | Sorghum | cytosol | 29.14 | 16.52 |
| Zm00001d008412_P001 | Maize | cytosol | 29.14 | 16.39 |
| KXG28768 | Sorghum | nucleus | 27.75 | 16.31 |
| PGSC0003DMT400038431 | Potato | nucleus | 22.34 | 16.26 |
| HORVU7Hr1G050080.1 | Barley | nucleus | 29.32 | 16.25 |
| Solyc08g029220.1.1 | Tomato | nucleus | 22.34 | 16.22 |
| CDX76994 | Canola | nucleus | 16.4 | 16.15 |
| CDY27809 | Canola | nucleus | 27.92 | 16.13 |
| Zm00001d008413_P001 | Maize | cytosol | 28.62 | 16.11 |
| CDY35353 | Canola | cytosol | 17.28 | 15.89 |
| TraesCS2B01G099600.2 | Wheat | nucleus | 30.02 | 15.68 |
| TraesCS2D01G082800.1 | Wheat | nucleus | 30.02 | 15.65 |
| CDY51818 | Canola | nucleus | 10.65 | 15.4 |
| HORVU3Hr1G051850.2 | Barley | nucleus | 30.37 | 15.38 |
| Zm00001d019461_P002 | Maize | cytosol | 29.67 | 15.23 |
| EER98396 | Sorghum | nucleus | 30.02 | 15.07 |
| CDY49460 | Canola | nucleus | 17.1 | 15.03 |
| CDY40464 | Canola | nucleus | 12.57 | 15.0 |
| EES09993 | Sorghum | nucleus | 28.8 | 14.96 |
| CDY11521 | Canola | nucleus | 15.36 | 14.86 |
| TraesCS2A01G080400.1 | Wheat | cytosol | 20.77 | 14.78 |
| CDY32121 | Canola | nucleus | 11.87 | 14.62 |
| OQU83714 | Sorghum | cytosol, nucleus, plastid | 26.7 | 14.49 |
| TraesCS2D01G078000.1 | Wheat | cytosol | 16.23 | 14.46 |
| OQU83709 | Sorghum | cytosol | 29.32 | 14.46 |
| CDY47298 | Canola | cytosol | 14.66 | 14.38 |
| CDX74632 | Canola | cytosol | 14.66 | 14.31 |
| CDY19683 | Canola | cytosol | 17.28 | 14.29 |
| CDX76752 | Canola | nucleus | 15.36 | 14.22 |
| TraesCS1D01G042900.1 | Wheat | nucleus | 28.1 | 13.51 |
| TraesCS1B01G054900.1 | Wheat | nucleus | 27.92 | 13.42 |
| HORVU1Hr1G008940.2 | Barley | nucleus | 27.57 | 13.19 |
| CDX93081 | Canola | nucleus | 15.88 | 13.13 |
| TraesCS1A01G042500.1 | Wheat | nucleus | 27.23 | 13.11 |
| CDY41919 | Canola | nucleus, plastid | 27.23 | 13.1 |
| CDY15046 | Canola | nucleus | 15.71 | 13.04 |
| EES08665 | Sorghum | nucleus | 15.36 | 12.96 |
| CDY31307 | Canola | cytosol | 1.92 | 11.96 |
| Os11t0573800-00 | Rice | nucleus | 17.45 | 10.89 |
| CDY34931 | Canola | cytosol | 4.01 | 10.22 |
| CDX74082 | Canola | cytosol | 4.01 | 10.18 |
| CDX99362 | Canola | nucleus | 4.71 | 9.47 |
| CDY41917 | Canola | nucleus | 15.53 | 9.31 |
| CDX99361 | Canola | cytosol | 2.27 | 8.9 |
| CDY60010 | Canola | cytosol, mitochondrion, nucleus | 3.14 | 8.18 |
| TraesCS2D01G077900.1 | Wheat | cytosol | 7.68 | 8.15 |
| CDX74107 | Canola | cytosol | 2.97 | 6.34 |
| CDY60891 | Canola | cytosol, mitochondrion, nucleus | 1.92 | 6.32 |
| CDX78941 | Canola | nucleus | 5.76 | 5.98 |
| CDX76476 | Canola | cytosol | 1.05 | 5.88 |
| CDY12569 | Canola | cytosol | 3.66 | 5.87 |
| CDX76475 | Canola | cytosol | 2.09 | 5.83 |
| CDY12382 | Canola | nucleus | 3.66 | 5.74 |
| CDY27107 | Canola | nucleus | 3.49 | 5.46 |
| CDY09330 | Canola | cytosol | 2.09 | 5.33 |
| CDX92584 | Canola | mitochondrion | 3.14 | 5.16 |
| CDY08035 | Canola | cytosol | 0.87 | 5.05 |
| CDX76473 | Canola | cytosol | 2.09 | 4.96 |
| CDX78942 | Canola | cytosol | 2.62 | 4.9 |
| KRH34004 | Soybean | cytosol | 2.62 | 4.72 |
| CDX99360 | Canola | cytosol | 2.62 | 4.5 |
| CDX76474 | Canola | cytosol | 1.75 | 4.17 |
| CDY60890 | Canola | cytosol | 1.75 | 4.13 |
| KRH34003 | Soybean | cytosol | 2.09 | 4.12 |
Protein Annotations
| EnsemblPlants:CDY13918 | EnsemblPlantsGene:GSBRNA2T00078388001 | InterPro:DUF3444 | PANTHER:PTHR45089 | PFAM:PF11926 | ProteinID:CDY13918 |
| ProteinID:CDY13918.1 | UniParc:UPI0004EDE57C | UniProt:A0A078FNJ9 | MapMan:35.2 | : | : |
Description
BnaC09g39080DBnaC09g39080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FNJ9]
Coordinates
chrLK032039:+:155512..157269
Molecular Weight (calculated)
66006.3 Da
IEP (calculated)
5.253
GRAVY (calculated)
-0.609
Length
573 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSTVNELLR WNKSAPNHHV RSDLVSSTRE NQQEKAQAFS LQQQENVPSN NSGTHVGDKR KRNEYDASRS VEHNNRRRSD ANIDAERGEE SVQKENYECA
101: DPMFNDFEKL RADANFAVGQ TWALFDTLDG MPRLYAQIRK VSAPSFGLRI TYLEPDPDDE KQIQWCEEDL PVSTGKFRLG KNENTKDCSI FSHLIQCSEG
201: SNTGRHFTIS PRKGETWALF KNWDINWSSE PDSHRKYEYE FVEILSDYTD ETGVFVSYLH KAKGFASVFF RLGTGPADIF RINTLYRFSH MVPSFRLTGT
301: EAKGVPKDAY ELDQAALPKT IQEVMVPSES NSKPKRQDIY FASKGKVFQT GQIWSFCSGY DDLPLYYGKI QKITFTQAFK QEPVFKLHIG RLKATTPFPK
401: DVVEWRDRGM PVGCGTFYAR KALEIITPSQ VSHQVIPQVS LDGNEYTILP KIGEVWAIYR YWSVHIDVED LEFGLYDIVE VLDDSLEDYK VQMLVQESFL
501: DDDENYNRYF KGATEYVDNE VEGSEPIFTI PKSERIRFSN KVHALRVTKE IHGELNDLFC MEFNAVPINI LLH
101: DPMFNDFEKL RADANFAVGQ TWALFDTLDG MPRLYAQIRK VSAPSFGLRI TYLEPDPDDE KQIQWCEEDL PVSTGKFRLG KNENTKDCSI FSHLIQCSEG
201: SNTGRHFTIS PRKGETWALF KNWDINWSSE PDSHRKYEYE FVEILSDYTD ETGVFVSYLH KAKGFASVFF RLGTGPADIF RINTLYRFSH MVPSFRLTGT
301: EAKGVPKDAY ELDQAALPKT IQEVMVPSES NSKPKRQDIY FASKGKVFQT GQIWSFCSGY DDLPLYYGKI QKITFTQAFK QEPVFKLHIG RLKATTPFPK
401: DVVEWRDRGM PVGCGTFYAR KALEIITPSQ VSHQVIPQVS LDGNEYTILP KIGEVWAIYR YWSVHIDVED LEFGLYDIVE VLDDSLEDYK VQMLVQESFL
501: DDDENYNRYF KGATEYVDNE VEGSEPIFTI PKSERIRFSN KVHALRVTKE IHGELNDLFC MEFNAVPINI LLH
001: MNAQVGVAMG ISQNLEADNN SFLCDSGSAG AVPQKISGCA GLKFNDFDRL REGVKFEAGQ TWAIYNNTVD QMPRLYAQIR KVSAPCFSLR ITYLEPDPDG
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
101: EKETQWFEED LPVSVGKFRL GENKSTQDRS IFSHVIHCNE RSNTSCFSIT CRFIDTCHFS VSPRKGETWA LFKNWDIKWS SELDSHRKYE YEFVEILSDY
201: ADEAGVYVAY LHKAKGFASV FFRMGTGYEG IFRILPRSLY RFSHRVPSFK LTGDEGNGVA KDAYELDEAA LPETIEEFIM PSNSESETKS EHQAIYFASE
301: GKVFQTGQIW SFHSGYDDLP LYYGRIQKIT FTQAFKQDPV IKLHISRLKA TRFPEDVINW KYGGMPVGCG TFYARKVQEI ITPSEVSHQI MPQTSMDGIE
401: YTILPKIGEV WAIYRYWSRY IDVDRLEFGL YDIVEILDDT LDYKVQLLTQ QPVSDDRNDM EHRLFRACTE YTSNEDDGSE PIFTIPKTER IRFSNKVPAT
501: RVTKEMYGEL EDNSKVEFRA TPINVIHC
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF3444) (TAIR:AT5G18740.1); Has 30201 Blast hits to 17322 proteins in 780 /.../es: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G18730]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.