Factsheet for Bra013179.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
endoplasmic reticulum 1
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002487.1-P
Bra006665.1-P
Bra010569.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G05230.1	Bra010569.1-P	AT4G36690.1	21798944
AT2G05230.1	Bra002487.1-P	AT5G60340.1	21798944
AT2G05230.1	Bra006665.1-P	AT5G60340.1	21798944
AT2G05250.1	Bra010569.1-P	AT4G36690.1	21798944
AT2G05250.1	Bra002487.1-P	AT5G60340.1	21798944
AT2G05250.1	Bra006665.1-P	AT5G60340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93081	Canola	nucleus	100.0	100.0
CDY15046	Canola	nucleus	97.4	97.83
AT2G05250.1	Thale cress	cytosol	83.69	82.15
AT2G05230.1	Thale cress	cytosol	83.69	82.15
Bra035378.1-P	Field mustard	cytosol	69.7	70.2
VIT_12s0057g00710.t01	Wine grape	cytosol	50.79	50.72
KRH73997	Soybean	nucleus	51.08	50.21
KRH14137	Soybean	nucleus	50.79	49.79
Bra020958.1-P	Field mustard	cytosol	6.35	43.14
Solyc07g047690.1.1	Tomato	nucleus	48.48	42.64
Solyc05g040050.1.1	Tomato	nucleus	46.75	41.38
Bra031906.1-P	Field mustard	cytosol	5.34	40.22
GSMUA_Achr8P00660_001	Banana	cytosol	31.6	36.38
Bra020957.1-P	Field mustard	cytosol	10.53	35.44
Bra034258.1-P	Field mustard	cytosol	30.74	34.41
Bra039476.1-P	Field mustard	cytosol	9.81	33.01
GSMUA_Achr2P21160_001	Banana	cytosol	25.25	32.53
Bra007790.1-P	Field mustard	nucleus	27.71	32.43
TraesCS3A01G536400.1	Wheat	cytosol	34.63	32.34
Os02t0510000-01	Rice	cytosol	34.05	32.15
TraesCS3B01G607500.1	Wheat	cytosol	34.34	32.08
Zm00001d003948_P001	Maize	cytosol	34.05	32.07
EES10633	Sorghum	cytosol	33.91	31.97
TraesCS3D01G541800.1	Wheat	cytosol	34.34	31.9
OQU85000	Sorghum	cytosol	33.48	31.87
PGSC0003DMT400092645	Potato	cytosol	5.92	31.78
GSMUA_Achr11P...	Banana	cytosol	22.94	31.67
TraesCS2A01G284200.2	Wheat	cytosol	33.48	31.65
TraesCS2D01G283100.2	Wheat	cytosol	33.48	31.65
GSMUA_Achr3P02570_001	Banana	nucleus	23.81	31.55
GSMUA_Achr6P12230_001	Banana	nucleus	26.26	31.38
Zm00001d025238_P001	Maize	cytosol	33.19	31.34
TraesCS2B01G301100.1	Wheat	cytosol	31.75	31.16
HORVU1Hr1G001860.1	Barley	nucleus	19.62	30.91
Bra003079.1-P	Field mustard	cytosol	31.46	30.75
GSMUA_Achr10P...	Banana	cytosol	27.13	30.67
EES07899	Sorghum	cytosol	32.47	30.61
EES10933	Sorghum	cytosol	31.89	30.52
Zm00001d025585_P001	Maize	cytosol	32.18	30.42
Zm00001d025584_P001	Maize	cytosol	32.18	30.42
Os03t0401200-01	Rice	cytosol	32.61	30.21
TraesCS5A01G493100.1	Wheat	cytosol	32.9	29.96
Zm00001d050565_P001	Maize	cytosol	27.27	29.35
TraesCS4D01G315600.1	Wheat	cytosol	32.18	29.3
Bra001194.1-P	Field mustard	cytosol	8.37	28.71
Os04t0388800-01	Rice	nucleus	24.24	28.09
TraesCS4B01G319100.1	Wheat	cytosol	28.86	28.09
Bra038959.1-P	Field mustard	nucleus	15.44	27.79
Bra040300.1-P	Field mustard	cytosol	14.43	27.1
TraesCS3B01G470100.1	Wheat	nucleus	28.28	27.0
Bra017315.1-P	Field mustard	nucleus	17.89	26.0
Os01t0923800-01	Rice	nucleus	27.85	25.94
Bra020955.1-P	Field mustard	cytosol	10.53	25.89
TraesCS3A01G435100.1	Wheat	nucleus	28.43	24.91
Bra020956.1-P	Field mustard	nucleus	12.41	24.64
KXG34016	Sorghum	nucleus	29.15	24.37
Zm00001d011997_P001	Maize	nucleus	28.86	24.33
Bra020757.1-P	Field mustard	nucleus	22.08	23.43
Bra005331.1-P	Field mustard	nucleus	17.17	22.67
Bra001216.1-P	Field mustard	cytosol	7.36	22.57
Bra041167.1-P	Field mustard	cytosol, nucleus, plastid	2.02	21.54
Bra040290.1-P	Field mustard	cytosol, mitochondrion	5.63	21.43
Bra009972.1-P	Field mustard	nucleus	19.05	20.99
Bra039461.1-P	Field mustard	cytosol	15.73	20.45
Bra013403.1-P	Field mustard	nucleus	15.58	19.93
Bra013404.1-P	Field mustard	nucleus	12.7	19.73
Bra024236.1-P	Field mustard	nucleus	9.24	17.39
Bra039477.1-P	Field mustard	plastid	13.42	17.29
Bra002183.1-P	Field mustard	nucleus	13.42	16.37
Bra006478.1-P	Field mustard	nucleus	11.83	15.41
Bra006479.1-P	Field mustard	cytosol	12.12	15.22
Bra006473.1-P	Field mustard	plastid	13.42	13.23
Bra006476.1-P	Field mustard	nucleus	10.68	12.59
Bra002182.1-P	Field mustard	nucleus	12.12	7.74
Bra006477.1-P	Field mustard	cytosol	14.57	7.35
Bra039474.1-P	Field mustard	nucleus	15.44	7.01
Bra002184.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Bra013179.1	EnsemblPlants:Bra013179.1-P	EnsemblPlantsGene:Bra013179	Gene3D:1.10.287.110	InterPro:DUF3444	InterPro:DnaJ_domain
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR44137	PANTHER:PTHR44137:SF2	PFAM:PF00226
PFAM:PF11926	PFscan:PS50076	PRINTS:PR00625	SEG:seg	SMART:SM00271	SUPFAM:SSF46565
UniParc:UPI000254091C	UniProt:M4D9L9	MapMan:35.2	:	:	:

Description

AT2G05250 (E=0.0) | DNAJ heat shock N-terminal domain-containing protein

Coordinates

chrA03:-:20019316..20021397

Molecular Weight (calculated)

77596.4 Da

IEP (calculated)

9.000

GRAVY (calculated)

-0.544

Length

693 amino acids

Sequence
(BLAST)

001: MEAYREEALR VKQVAERRFA EKDFASARSY ALKARSLSPD LEGLAQMIAT FEVYLASQCR SGGGQIDYYA VLGLKPSAGK RDVKKQYKKM AVLLHPDKNK
101: CIGADGAFHL VSEAWKFLSN EFNKSTFYYK RKKHIESSTV VQKHRAEYAP GTAAFDRFPP SSSSERLDTF WTVCTSCKVQ YEYLRKYVNK RLSCKNCRGA
201: FIAVETGPAP VSAPFHYTHP SHAPPPLHSN GYSSHSYDAR MPTNSTYLLG HHYPSQGHGY EYGSYDWSSS YPETASPGNL DLKRVSSVSN GYPYKHSKSV
301: ATTGIINKVK DGSNGTSSVK TKPDGLIYAN PPGLSTHTAA VKVGRPEKKS RVFIEASVNG FVENPLMRSA PVSKTANAEF KLHGQSYGST RRWSAASVLD
401: TRKPLLQKAR ADIKQRLDSI RLASEAAAAA AATAAVEEDT RPVDSCKLGD VTAGRKTSGP ITVPDSDFHD FDKNRSEECF EPRQIWAIYD EDDGMPRLYC
501: VVREVLSLEP FKIDIAYLSS KTDIEFGSMK WVQYGFTKSC GHFRIQNYDV VEQVNIFSHL LRGRKTGRGG CVRIFPKTGD IWAVYKNWSL NWNESTPDEV
601: RHEYEMVEIL DEYTEQYGVC IAPLVKLEGY KTVYHRSGKE DGKKWIPRSE MLRFSHQVPS WFLKGATSGF PGNCWDLDPA AIPEELLHVG AEA

Best Arabidopsis Sequence Match ( AT2G05250.1 )
(BLAST)

001: MEAYREEALR VKQIAERRFA EKDFTSARSY ALKAKSLFPD LEGLSQMVAT FEVYLASQTR SGGQIDYYAV LGLKPSAGKR EVKKQYKKMA VLLHPDKNKC
101: IGADGAFHLI SEAWSFLSNE FNKSTFYYKR KKHIDSTEVQ KHSTEYMPGT GTGTGTAVFD RFPPSSERLD TFWTVCTSCK VQYEYLRKYV NKRLSCKNCR
201: GAFIAVETGP APVSAPFHYT PPSHAPPSHA PPSHAPPSNG YGAHGYDAMS RMPTNSTYFL GHYPGQGHGY DYSTNGSYEW SSYSGTTTSP GNLDLKRVSS
301: VSNGYPYKHS NSVVSGGINK VKDGSNGTCS KKSTPGGLIY PNQISMSAHA SANKVGRPGK KSKVFMEAAA NGFVENPLRS VSVSKTANTD AKMDQDYKLH
401: IQSSTRRWSA ASVLDTRKPL IQKARTDIKQ RLEMMRLALE AAAAAEDATP LDEKTVLSCK LGDVTGRKTN GPITVPDSDF HDFDKNRSEE SFEPRQIWAI
501: YDEDDGMPRL YCVVREVLSV QPFKIDIAYL SSKTDIEFGS MKWVQYGFTK SCGHFRIRNS DIVDHVNIFS HLLKGKKTGR GGCVRIFPTA GEIWAVYKNW
601: SLNWDGSTPD EVRHQYEMVE ILDEYTEQYG VCVTPLVKLE GYKTVYHRST REDSKKWIPR CEMLRFSHQV PSWFLKDATS GFPENCWDLD PAAIPEELLH
701: IGAGTN

Arabidopsis Description

At2g05250/F5G3.15 [Source:UniProtKB/TrEMBL;Acc:Q9S7L6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.