Factsheet for Bra017315.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40464	Canola	nucleus	98.32	97.71
Bra005331.1-P	Field mustard	nucleus	76.1	69.14
AT2G35540.1	Thale cress	nucleus	74.21	60.0
Bra020958.1-P	Field mustard	cytosol	7.97	37.25
VIT_02s0012g02290.t01	Wine grape	nucleus	44.86	36.21
Bra031906.1-P	Field mustard	cytosol	6.92	35.87
GSMUA_Achr4P05630_001	Banana	cytosol	36.27	34.46
KRH74334	Soybean	cytosol, nucleus	40.04	34.05
KRH39596	Soybean	nucleus	40.88	33.68
HORVU7Hr1G005730.1	Barley	cytosol	27.04	28.86
TraesCS7A01G033400.1	Wheat	plastid	27.04	28.6
Zm00001d045553_P001	Maize	cytosol	28.51	28.57
EES11310	Sorghum	cytosol, plastid	29.14	28.25
Os06t0111700-01	Rice	nucleus	28.3	28.24
TraesCS4A01G456000.1	Wheat	plastid	26.0	27.49
KXG19130	Sorghum	cytosol	28.51	26.88
Bra039476.1-P	Field mustard	cytosol	11.11	25.73
Bra020957.1-P	Field mustard	cytosol	10.27	23.79
PGSC0003DMT400047612	Potato	nucleus	41.72	21.7
Solyc08g005300.1.1	Tomato	nucleus	40.88	21.38
Bra009972.1-P	Field mustard	nucleus	26.21	19.87
Bra001194.1-P	Field mustard	cytosol	8.39	19.8
Bra034258.1-P	Field mustard	cytosol	25.37	19.55
Bra007790.1-P	Field mustard	nucleus	23.48	18.92
Bra038959.1-P	Field mustard	nucleus	15.09	18.7
Bra003079.1-P	Field mustard	cytosol	27.46	18.48
Bra013179.1-P	Field mustard	nucleus	26.0	17.89
Bra035378.1-P	Field mustard	cytosol	25.79	17.88
Bra020757.1-P	Field mustard	nucleus	23.27	17.0
Bra020956.1-P	Field mustard	nucleus	11.95	16.33
Bra040300.1-P	Field mustard	cytosol	12.58	16.26
Bra020955.1-P	Field mustard	cytosol	9.22	15.6
Bra001216.1-P	Field mustard	cytosol	7.34	15.49
Bra039461.1-P	Field mustard	cytosol	17.19	15.38
Bra024236.1-P	Field mustard	nucleus	11.53	14.95
Bra039477.1-P	Field mustard	plastid	15.72	13.94
Bra006478.1-P	Field mustard	nucleus	14.88	13.35
Bra040290.1-P	Field mustard	cytosol, mitochondrion	5.03	13.19
Bra013404.1-P	Field mustard	nucleus	11.74	12.56
Bra002183.1-P	Field mustard	nucleus	14.68	12.32
Bra006479.1-P	Field mustard	cytosol	14.05	12.14
Bra013403.1-P	Field mustard	nucleus	12.79	11.25
Bra006476.1-P	Field mustard	nucleus	13.21	10.71
Bra006473.1-P	Field mustard	plastid	15.72	10.67
Bra041167.1-P	Field mustard	cytosol, nucleus, plastid	1.05	7.69
Bra006477.1-P	Field mustard	cytosol	18.24	6.33
Bra039474.1-P	Field mustard	nucleus	18.03	5.64
Bra002182.1-P	Field mustard	nucleus	12.16	5.35
Bra002184.1-P	Field mustard	cytosol	0.21	0.38

Protein Annotations

Gene3D:1.10.287.110	MapMan:35.2	EnsemblPlantsGene:Bra017315	EnsemblPlants:Bra017315.1	EnsemblPlants:Bra017315.1-P	InterPro:DUF3444
InterPro:DnaJ_domain	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001623	InterPro:IPR019734
InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M4DLD4	PFAM:PF00226	PFAM:PF11926	PRINTS:PR00625
PFscan:PS50005	PFscan:PS50076	PANTHER:PTHR44137	SMART:SM00271	SUPFAM:SSF46565	InterPro:TPR_repeat
UniParc:UPI0002543C7F	SEG:seg	:	:	:	:

Description

AT2G35540 (E=6e-100) | DNAJ heat shock N-terminal domain-containing protein

Coordinates

chrA04:+:15399891..15401324

Molecular Weight (calculated)

54358.3 Da

IEP (calculated)

7.226

GRAVY (calculated)

-0.634

Length

477 amino acids

Sequence
(BLAST)

001: MASPEQDPDT VNEANHHKTL AESSFTSGDL TSALNHARKA LTLSPNTEGL SSMVTAFETI TSASGDAPEW YKILKVEPFS HFDTVKQQYS KLALALHPDK
101: NPYVGCEEGF RLVNEAFKVL EDRVRRNEYD AKLRIRIQGE IGACDGGCDE TASFSTVCTS KIITYSRKRK KRVDEVSESL RRVREVEAED EGMMTLAEMQ
201: SVLKRNKQKN INREEKMGRE TQEISSGDET LVEMSTNKEN GKREAVKKKK KKKTNHKELG EIVEDEDFDF DKERMPRSFK KGQVWAIYDD NVPRCYCLVS
301: EVVSVSPFKV WISWLDYESE KLISWMKNSS CGRFRVSEKA LIEHVKLFSH VVNCERVARE VYQVYPRKGS VWAVYSETDT GQKRRKTKHY EIVVCLTMYS
401: DAYGLSVAYL EKVGDSLFKR RDYGCNAVRW VEKEDVAGLL SHQIPAKKLQ EDQCGAGVRE SWVLDLASVP PDLVSAT

Best Arabidopsis Sequence Match ( AT2G35540.1 )
(BLAST)

001: MASGSDSEVE KESIHHKALA ESSFNCGDLM SALTHARKAL SLSPNTEGLS AMVTAFEIIS SAATVAGGFP EWYKVLKVEP FSHINTIKQQ YRKLALVLHP
101: DKNPYVGCEE GFKLLNEAFR VFSDKVRRTE YDMKLRIRIQ GEMVSGGSGG DETSTFSAVC SGCRSVHKFD RKYLGQNLMC PTCKNSFEAK EVEKEEEGRE
201: NGACTSKIIT YSRRKRPVDS DGESLIKEVE TGEMSQEAAE AINVFEGSDE EDEGMMTLAE MQAVIKRNKS KVNSKITEKD SSGEENMGRE TQKRSLADAS
301: MTETLREMST NAVNNKQEVL KNRKNIKKKK MANHKDLTEI VDLEYVPRVD RKRDRGKLSQ EMYMEDEDFE LYDFDKDRMP RSFKKGQIWA IYDGGDDKMP
401: RSYCLVSEVV SLNPFKVWIS WLDFESEKLI SWMKISSSHM PCGRFRVSEK ALIEQVKPFS HLVNCERAAR EIYQIYPKKG SVWAVYSETN PGLQRRKTRR
501: YEIVVCLTMY TDAYGLSVAY LEKVNDYSNL FKRRDYGYNA VRWVEKEDVA ALLSHQIPAK KLPEDESGAD LKESWVLDLA SVPPDLVSAT

Arabidopsis Description

DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IKR5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.