CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER88427
EER89222
EES03295
EES06216
EES07849
KXG22639
KXG22761
KXG27287
KXG29961
KXG39626

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G51660.1	EES06216	AT1G32380.1	21798944
AT1G51660.1	KXG27287	AT1G71230.1	21798944
AT1G51660.1	EER89222	AT2G43790.1	19513235
AT1G51660.1	EER89222	AT2G43790.1	21798944
AT1G51660.1	EES07849	AT3G08530.1	21798944
AT1G51660.1	KXG22761	AT3G08530.1	21798944
AT1G51660.1	KXG39626	AT3G45640.1	19513235
AT1G51660.1	KXG39626	AT3G45640.1	21798944
AT1G51660.1	EER88427	AT4G01090.1	21798944
AT1G51660.1	EES03295	AT4G01090.1	21798944
AT1G51660.1	KXG22639	AT4G01090.1	21798944
AT1G51660.1	KXG29961	AT4G01090.1	21798944
AT3G21220.1	EER89222	AT2G43790.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018326_P001	Maize	plastid	91.4	95.51
Os02t0787300-01	Rice	plasma membrane	87.9	88.62
TraesCS6B01G379500.1	Wheat	cytosol, plastid	83.06	83.06
TraesCS6D01G328800.1	Wheat	cytosol, plastid	81.72	82.61
KXG19514	Sorghum	plastid	76.08	81.56
HORVU5Hr1G067100.2	Barley	cytosol	47.31	75.86
GSMUA_Achr9P13590_001	Banana	mitochondrion	46.51	73.62
OQU83236	Sorghum	cytosol	23.92	70.08
CDY32415	Canola	cytosol, plastid	44.62	69.46
HORVU0Hr1G038850.2	Barley	cytosol	54.3	68.47
CDY27532	Canola	cytosol, plastid	56.99	64.83
CDY37306	Canola	cytosol, plastid	57.26	64.35
Bra023894.1-P	Field mustard	cytosol, plastid	57.26	64.35
Bra001818.1-P	Field mustard	plastid	56.99	64.24
CDX82209	Canola	plastid	56.72	63.94
AT3G21220.1	Thale cress	cytosol, plastid	58.33	62.36
CDY46547	Canola	cytosol, plastid	59.14	61.97
CDX87830	Canola	cytosol	35.75	61.86
Bra014295.1-P	Field mustard	cytosol, plastid	58.87	61.69
KRH47006	Soybean	cytosol, plastid	58.06	61.54
CDY52951	Canola	cytosol	58.87	61.52
CDX82210	Canola	plastid	50.54	61.44
Solyc03g123800.1.1	Tomato	nucleus	58.87	61.0
CDY43920	Canola	cytosol, plastid	55.11	60.83
Bra030430.1-P	Field mustard	cytosol, plastid	54.84	60.53
PGSC0003DMT400023739	Potato	plastid	59.41	59.73
AT1G51660.1	Thale cress	plastid	58.6	59.56
KRH44646	Soybean	cytosol, plastid	58.06	59.34
CDY32414	Canola	extracellular, plasma membrane	54.03	55.52
GSMUA_Achr3P05000_001	Banana	plastid	66.13	54.19
VIT_09s0018g01820.t01	Wine grape	plastid	60.75	53.81
Bra001817.1-P	Field mustard	cytosol	52.69	51.72
EER93571	Sorghum	mitochondrion	37.63	41.67
EER92617	Sorghum	mitochondrion	37.37	41.25
OQU91108	Sorghum	cytosol	34.95	39.88
EES03540	Sorghum	cytosol	33.6	35.21
KXG32862	Sorghum	cytosol	26.88	32.57
KXG27789	Sorghum	cytosol	27.42	32.48
OQU75818	Sorghum	cytosol	30.11	32.09
KXG30961	Sorghum	mitochondrion	30.91	31.59
OQU88009	Sorghum	cytosol	25.54	29.69
EER98773	Sorghum	plastid	24.73	27.22
KXG24971	Sorghum	cytosol	30.91	21.99
KXG29620	Sorghum	mitochondrion	22.31	15.51
KXG22814	Sorghum	cytosol, mitochondrion, peroxisome, plastid	23.66	15.07
OQU76383	Sorghum	cytosol, nucleus, plasma membrane	23.92	12.77
EER99430	Sorghum	cytosol	23.39	12.63
EES05936	Sorghum	cytosol	22.85	12.35
OQU90965	Sorghum	cytosol	26.34	11.46
KXG38178	Sorghum	cytosol	21.77	10.99
KXG40349	Sorghum	mitochondrion	22.31	10.88

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.1	Gene3D:3.30.200.20	UniProt:A0A1Z5RPZ9	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlants:OQU85840	ProteinID:OQU85840	ProteinID:OQU85840.1
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361
PANTHER:PTHR24361:SF319	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3004G323600	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000B425259	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:65819835..65821680

Molecular Weight (calculated)

40505.5 Da

IEP (calculated)

9.558

GRAVY (calculated)

-0.401

Length

372 amino acids

Sequence
(BLAST)

001: MRPGGPPNSR ALQPPSQQQQ QPGTPGRARR RPDLTLPLPQ RDMISLAVPL PLPLPPSSAP SSTSSSGSLS APSSLGAPTP PTSAGSAPAN PPPLCELERV
101: RRIGSGAGGT VWMVRHRPTG RPYALKVLYG NHDDAVRRQI TREIAILRTA EHPAVVRCHG MYEQAGELQI LLEYMDRGSL ENHRIADEHF LAHVARQVLS
201: GIAYLHRRHI VHRDIKPSNL LIDSGRRVKI ADFGVGRILN QTMDPCNSSV GTIAYMSPER INTDLNDGAY DGYAGDIWSF GLSILEFYLG RFPLGENLGK
301: QGDWAALMCA ICYSDSPQAP RNASADFKNF ISLCLQKNPA NRPSAMRLLQ HPFVAQPQTQ QAQPQPLAAP PS

Best Arabidopsis Sequence Match ( AT1G51660.1 )
(BLAST)

001: MRPIQSPPGV SVPVKSRPRR RPDLTLPLPQ RDVSLAVPLP LPPTSGGSGG SSGSAPSSGG SASSTNTNSS IEAKNYSDLV RGNRIGSGAG GTVYKVIHRP
101: SSRLYALKVI YGNHEETVRR QICREIEILR DVNHPNVVKC HEMFDQNGEI QVLLEFMDKG SLEGAHVWKE QQLADLSRQI LSGLAYLHSR HIVHRDIKPS
201: NLLINSAKNV KIADFGVSRI LAQTMDPCNS SVGTIAYMSP ERINTDLNQG KYDGYAGDIW SLGVSILEFY LGRFPFPVSR QGDWASLMCA ICMSQPPEAP
301: ATASPEFRHF ISCCLQREPG KRRSAMQLLQ HPFILRASPS QNRSPQNLHQ LLPPPRPLSS SSSPTT

Arabidopsis Description

MKK4MKK4 [Source:UniProtKB/TrEMBL;Acc:A0A178WCC0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.