Factsheet for GSMUA_Achr9P13590_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 3
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr2P12090_001
GSMUA_Achr2P19320_001
GSMUA_Achr3P25070_001
GSMUA_Achr5P06640_001
GSMUA_Achr6P33100_001
GSMUA_Achr7P14150_001
GSMUA_Achr9P04280_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G51660.1	GSMUA_Achr11P...	AT1G32380.1	21798944
AT1G51660.1	GSMUA_Achr2P12090_001	AT1G32380.1	21798944
AT1G51660.1	GSMUA_Achr10P...	AT1G71230.1	21798944
AT1G51660.1	GSMUA_Achr10P...	AT2G43790.1	19513235
AT1G51660.1	GSMUA_Achr2P19320_001	AT2G43790.1	19513235
AT1G51660.1	GSMUA_Achr5P06640_001	AT2G43790.1	19513235
AT1G51660.1	GSMUA_Achr10P...	AT2G43790.1	21798944
AT1G51660.1	GSMUA_Achr2P19320_001	AT2G43790.1	21798944
AT1G51660.1	GSMUA_Achr5P06640_001	AT2G43790.1	21798944
AT1G51660.1	GSMUA_Achr6P33100_001	AT3G45640.1	19513235
AT1G51660.1	GSMUA_Achr9P04280_001	AT3G45640.1	19513235
AT1G51660.1	GSMUA_Achr6P33100_001	AT3G45640.1	21798944
AT1G51660.1	GSMUA_Achr9P04280_001	AT3G45640.1	21798944
AT1G51660.1	GSMUA_Achr10P...	AT4G01090.1	21798944
AT1G51660.1	GSMUA_Achr10P...	AT4G01090.1	21798944
AT1G51660.1	GSMUA_Achr10P...	AT4G01090.1	21798944
AT1G51660.1	GSMUA_Achr3P25070_001	AT4G01090.1	21798944
AT1G51660.1	GSMUA_Achr7P14150_001	AT4G01090.1	21798944
AT3G21220.1	GSMUA_Achr10P...	AT2G43790.1	19513235
AT3G21220.1	GSMUA_Achr2P19320_001	AT2G43790.1	19513235
AT3G21220.1	GSMUA_Achr5P06640_001	AT2G43790.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P22810_001	Banana	cytosol	29.79	54.69
OQU83236	Sorghum	cytosol	28.09	51.97
GSMUA_Achr4P05870_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	72.77	51.51
Zm00001d045064_P001	Maize	extracellular, plasma membrane	75.74	51.3
HORVU7Hr1G031720.2	Barley	cytosol	57.45	50.56
KXG19514	Sorghum	plastid	74.47	50.43
TraesCS7B01G059000.1	Wheat	plastid	73.19	49.86
TraesCS7A01G154900.1	Wheat	plastid	73.19	49.28
TraesCS7D01G155100.1	Wheat	plastid	72.77	49.0
Os06t0191300-01	Rice	plasma membrane	69.79	47.95
Zm00001d018326_P001	Maize	plastid	71.91	47.47
CDX87830	Canola	cytosol	43.4	47.44
Zm00001d052066_P001	Maize	plastid	73.19	47.25
Os02t0787300-01	Rice	plasma membrane	74.04	47.15
CDY27532	Canola	cytosol, plastid	65.53	47.09
CDY37306	Canola	cytosol, plastid	65.96	46.83
Bra023894.1-P	Field mustard	cytosol, plastid	65.96	46.83
Solyc03g123800.1.1	Tomato	nucleus	71.06	46.52
TraesCS6B01G379500.1	Wheat	cytosol, plastid	73.62	46.51
OQU85840	Sorghum	plastid	73.62	46.51
TraesCS6D01G328800.1	Wheat	cytosol, plastid	72.77	46.47
PGSC0003DMT400023739	Potato	plastid	72.77	46.22
Bra001818.1-P	Field mustard	plastid	64.68	46.06
CDY43920	Canola	cytosol, plastid	65.11	45.4
Bra030430.1-P	Field mustard	cytosol, plastid	65.11	45.4
CDX82209	Canola	plastid	63.4	45.15
CDX82210	Canola	plastid	58.72	45.1
KRH47006	Soybean	cytosol, plastid	67.23	45.01
AT3G21220.1	Thale cress	cytosol, plastid	66.38	44.83
CDY46547	Canola	cytosol, plastid	66.81	44.23
Bra014295.1-P	Field mustard	cytosol, plastid	66.38	43.94
GSMUA_Achr3P05000_001	Banana	plastid	84.68	43.83
CDY52951	Canola	cytosol	66.38	43.82
AT1G51660.1	Thale cress	plastid	68.09	43.72
KRH44646	Soybean	cytosol, plastid	66.81	43.13
CDY32415	Canola	cytosol, plastid	41.28	40.59
CDY32414	Canola	extracellular, plasma membrane	62.13	40.33
HORVU5Hr1G067100.2	Barley	cytosol	39.57	40.09
GSMUA_Achr8P16600_001	Banana	cytosol	44.26	39.85
VIT_09s0018g01820.t01	Wine grape	plastid	69.36	38.81
HORVU0Hr1G038850.2	Barley	cytosol	48.51	38.64
Bra001817.1-P	Field mustard	cytosol	60.43	37.47
Os06t0191500-01	Rice	cytosol, plastid	47.66	36.6
GSMUA_Achr11P...	Banana	cytosol	43.4	35.42
GSMUA_Achr6P11270_001	Banana	cytosol	42.13	33.45
GSMUA_Achr9P00100_001	Banana	extracellular, vacuole	38.3	28.94
GSMUA_Achr7P09660_001	Banana	cytosol	37.87	25.43
GSMUA_Achr10P...	Banana	cytosol	36.6	24.64
GSMUA_Achr10P...	Banana	plastid	40.0	22.22
GSMUA_Achr9P18710_001	Banana	cytosol	24.26	19.26
GSMUA_Achr8P11800_001	Banana	mitochondrion	25.96	14.15
GSMUA_Achr3P04830_001	Banana	cytosol	24.26	13.32
GSMUA_Achr6P28000_001	Banana	cytosol	19.57	12.37
GSMUA_Achr9P13450_001	Banana	cytosol	26.38	10.82
GSMUA_Achr9P18700_001	Banana	cytosol	9.79	10.04
GSMUA_Achr4P24470_001	Banana	nucleus	27.23	9.1
GSMUA_Achr7P00480_001	Banana	cytosol	30.21	8.75
GSMUA_Achr11P...	Banana	cytosol	26.38	8.28
GSMUA_Achr10P...	Banana	cytosol	26.81	7.95
GSMUA_Achr4P23660_001	Banana	cytosol	25.11	7.94
GSMUA_Achr8P11810_001	Banana	nucleus	9.36	5.58

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr9G13590_001	EnsemblPlants:GSMUA_Achr9P13590_001	EnsemblPlants:GSMUA_Achr9T13590_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0U017
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF319
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000296D1E5
SEG:seg	:	:	:	:	:

Description

Mitogen-activated protein kinase kinase 5 [Source:GMGC_GENE;Acc:GSMUA_Achr9G13590_001]

Coordinates

chr9:+:8857180..8858238

Molecular Weight (calculated)

25943.3 Da

IEP (calculated)

10.140

GRAVY (calculated)

-0.307

Length

235 amino acids

Sequence
(BLAST)

001: MRPGTVPLRP GQHGVSSRAR RRPDLTLPLP QRDPAIAVPL PLPPPSAPLS DLERVRRIGS GSGGTVWLVR HRTTGRHYAL KVIYGNHEDA VLAGLAYLHR
101: RKIVHRDIKP SNLLIDSGGR VKIADFGRIN TDLNHGLYDG YAGDIWSFGL SILEFCLGRF PFGDNIGRQG DWASLMCAIC YADPPEAPPT ASREFRSFIS
201: CCLQKDPARR LPAVQLLQHP FITNNHPSLT SSTHP

Best Arabidopsis Sequence Match ( AT3G21220.2 )
(BLAST)

001: MKPIQSPSGV ASPMKNRLRK RPDLSLPLPH RDVALAVPLP LPPPSSSSSA PASSSAISTN ISAAKSLSEL ERVNRIGSGA GGTVYKVIHT PTSRPFALKV
101: IYGNHEDTVR RQICREIEIL RSVDHPNVVK CHDMFDHNGE IQVLLEFMDQ GSLEGAHIWQ EQELADLSRQ ILSGLAYLHR RHIVHRDIKP SNLLINSAKN
201: VKIADFGVSR ILAQTMDPCN SSVGTIAYMS PERINTDLNH GRYDGYAGDV WSLGVSILEF YLGRFPFAVS RQGDWASLMC AICMSQPPEA PATASQEFRH
301: FVSCCLQSDP PKRWSAQQLL QHPFILKATG GPNLRQMLPP PRPLPSAS

Arabidopsis Description

MKK5MKK5 [Source:UniProtKB/TrEMBL;Acc:A0A178VIK5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.