Factsheet for TraesCS6B01G379500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G425200.2
TraesCS1B01G459600.2
TraesCS1D01G434200.2
TraesCS2A01G504600.1
TraesCS2D01G505300.1
TraesCS3A01G224200.2
TraesCS3B01G253700.2
TraesCS3D01G229400.1
TraesCS4A01G106400.1
TraesCS4A01G182300.1
TraesCS4B01G136100.2
TraesCS4B01G197800.1
TraesCS4D01G130900.1
TraesCS4D01G198600.1
TraesCS5A01G153500.1
TraesCS5B01G152300.1
TraesCS5D01G158800.1
TraesCS6A01G088200.2
TraesCS6B01G110600.1
TraesCS7A01G111300.1
TraesCS7A01G336000.1
TraesCS7A01G351500.1
TraesCS7B01G009200.1
TraesCS7B01G247600.1
TraesCS7B01G276600.1
TraesCS7D01G106400.1
TraesCS7D01G343700.1
TraesCS7D01G371500.1
TraesCSU01G018200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G51660.1	TraesCS6A01G088200.2	AT1G32380.1	21798944
AT1G51660.1	TraesCS6B01G110600.1	AT1G32380.1	21798944
AT1G51660.1	TraesCSU01G018200.1	AT1G32380.1	21798944
AT1G51660.1	TraesCS2A01G504600.1	AT1G71230.1	21798944
AT1G51660.1	TraesCS2D01G505300.1	AT1G71230.1	21798944
AT1G51660.1	TraesCS7A01G111300.1	AT2G43790.1	19513235
AT1G51660.1	TraesCS7B01G009200.1	AT2G43790.1	19513235
AT1G51660.1	TraesCS7D01G106400.1	AT2G43790.1	19513235
AT1G51660.1	TraesCS7A01G111300.1	AT2G43790.1	21798944
AT1G51660.1	TraesCS7B01G009200.1	AT2G43790.1	21798944
AT1G51660.1	TraesCS7D01G106400.1	AT2G43790.1	21798944
AT1G51660.1	TraesCS4A01G182300.1	AT3G08530.1	21798944
AT1G51660.1	TraesCS4B01G136100.2	AT3G08530.1	21798944
AT1G51660.1	TraesCS4D01G130900.1	AT3G08530.1	21798944
AT1G51660.1	TraesCS5A01G153500.1	AT3G08530.1	21798944
AT1G51660.1	TraesCS5B01G152300.1	AT3G08530.1	21798944
AT1G51660.1	TraesCS5D01G158800.1	AT3G08530.1	21798944
AT1G51660.1	TraesCS4A01G106400.1	AT3G45640.1	19513235
AT1G51660.1	TraesCS4B01G197800.1	AT3G45640.1	19513235
AT1G51660.1	TraesCS4D01G198600.1	AT3G45640.1	19513235
AT1G51660.1	TraesCS4A01G106400.1	AT3G45640.1	21798944
AT1G51660.1	TraesCS4B01G197800.1	AT3G45640.1	21798944
AT1G51660.1	TraesCS4D01G198600.1	AT3G45640.1	21798944
AT1G51660.1	TraesCS1A01G425200.2	AT4G01090.1	21798944
AT1G51660.1	TraesCS1B01G459600.2	AT4G01090.1	21798944
AT1G51660.1	TraesCS1D01G434200.2	AT4G01090.1	21798944
AT1G51660.1	TraesCS3A01G224200.2	AT4G01090.1	21798944
AT1G51660.1	TraesCS3B01G253700.2	AT4G01090.1	21798944
AT1G51660.1	TraesCS3D01G229400.1	AT4G01090.1	21798944
AT1G51660.1	TraesCS7A01G336000.1	AT4G01090.1	21798944
AT1G51660.1	TraesCS7A01G351500.1	AT4G01090.1	21798944
AT1G51660.1	TraesCS7B01G247600.1	AT4G01090.1	21798944
AT1G51660.1	TraesCS7B01G276600.1	AT4G01090.1	21798944
AT1G51660.1	TraesCS7D01G343700.1	AT4G01090.1	21798944
AT1G51660.1	TraesCS7D01G371500.1	AT4G01090.1	21798944
AT3G21220.1	TraesCS7A01G111300.1	AT2G43790.1	19513235
AT3G21220.1	TraesCS7B01G009200.1	AT2G43790.1	19513235
AT3G21220.1	TraesCS7D01G106400.1	AT2G43790.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G328800.1	Wheat	cytosol, plastid	97.58	98.64
Os02t0787300-01	Rice	plasma membrane	87.9	88.62
Zm00001d018326_P001	Maize	plastid	81.45	85.11
OQU85840	Sorghum	plastid	83.06	83.06
TraesCS7B01G059000.1	Wheat	plastid	75.54	81.45
Zm00001d052066_P001	Maize	plastid	79.03	80.77
HORVU0Hr1G038850.2	Barley	cytosol	61.29	77.29
GSMUA_Achr9P13590_001	Banana	mitochondrion	46.51	73.62
CDY32415	Canola	cytosol, plastid	43.55	67.78
CDY27532	Canola	cytosol, plastid	57.8	65.75
Bra023894.1-P	Field mustard	cytosol, plastid	58.06	65.26
CDY37306	Canola	cytosol, plastid	58.06	65.26
Bra001818.1-P	Field mustard	plastid	57.26	64.55
CDX82209	Canola	plastid	56.72	63.94
CDX87830	Canola	cytosol	36.83	63.72
AT3G21220.1	Thale cress	cytosol, plastid	58.6	62.64
CDY46547	Canola	cytosol, plastid	59.14	61.97
CDX82210	Canola	plastid	50.81	61.76
Bra014295.1-P	Field mustard	cytosol, plastid	58.87	61.69
CDY52951	Canola	cytosol	58.6	61.24
KRH47006	Soybean	cytosol, plastid	57.53	60.97
AT1G51660.1	Thale cress	plastid	59.95	60.93
CDY43920	Canola	cytosol, plastid	55.11	60.83
Bra030430.1-P	Field mustard	cytosol, plastid	54.84	60.53
Solyc03g123800.1.1	Tomato	nucleus	58.06	60.17
PGSC0003DMT400023739	Potato	plastid	59.41	59.73
KRH44646	Soybean	cytosol, plastid	57.8	59.07
CDY32414	Canola	extracellular, plasma membrane	54.57	56.08
GSMUA_Achr3P05000_001	Banana	plastid	66.13	54.19
VIT_09s0018g01820.t01	Wine grape	plastid	59.14	52.38
Bra001817.1-P	Field mustard	cytosol	53.23	52.24
TraesCS4B01G239400.1	Wheat	mitochondrion	36.83	41.39
TraesCS4B01G048600.1	Wheat	mitochondrion	36.83	40.65
TraesCS4B01G048900.1	Wheat	cytosol, mitochondrion	36.29	40.42
TraesCS3B01G066300.1	Wheat	cytosol, mitochondrion	36.56	40.24
TraesCS4B01G049000.1	Wheat	cytosol, mitochondrion	35.75	39.35
TraesCS4B01G048100.1	Wheat	mitochondrion	36.02	39.07
TraesCS1B01G419600.1	Wheat	cytosol	11.56	35.83
TraesCS4B01G315300.1	Wheat	cytosol	33.87	35.49
TraesCS1B01G419300.1	Wheat	plasma membrane	29.03	25.78
TraesCS1B01G419400.1	Wheat	plastid	22.31	25.3
TraesCS5B01G122600.1	Wheat	cytosol	28.76	22.48
TraesCS5B01G565100.3	Wheat	cytosol	30.65	21.71
TraesCS5B01G196400.1	Wheat	cytosol	22.58	16.22
TraesCS6B01G177800.1	Wheat	cytosol	20.7	14.21
TraesCS2B01G249900.1	Wheat	cytosol	23.39	12.57
TraesCS7B01G130700.1	Wheat	cytosol	22.58	12.0
TraesCS6B01G386100.1	Wheat	cytosol	21.77	11.65
TraesCS5B01G397300.1	Wheat	cytosol	26.61	11.54
TraesCS1B01G199100.2	Wheat	cytosol	22.04	11.33
TraesCS4B01G398400.3	Wheat	mitochondrion	21.24	10.62
TraesCS4B01G395600.1	Wheat	nucleus	17.47	10.33

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24361	PANTHER:PTHR24361:SF469	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS6B01G379500	EnsemblPlants:TraesCS6B01G379500.1	TIGR:cd06623	SEG:seg	:

Description

No Description!

Coordinates

chr6B:+:654608613..654609731

Molecular Weight (calculated)

39864.8 Da

IEP (calculated)

9.402

GRAVY (calculated)

-0.321

Length

372 amino acids

Sequence
(BLAST)

001: MRPGGPPNAR PGLQQQQPGT PGRARRRPDL TLPLPQRDLT SLAVPLPLPP PPSSAPSSTS SSGSGSGSGG ASSMPMPMSM TPPNSAGSAP PAPPPLGELE
101: RVRRVGSGAG GTVWLVRHAP TGRAYALKVL YGHHDEAVRR QITREIAILR TAEHPSIVRC HGMYEQAGEL QILLEYMDGG SLDGRRIASE AFLADVARQV
201: LSGIAYLHRR HIVHRDIKPS NLLIDSGRRV KIADFGVGRI LNQTMDPCNS SVGTIAYMSP ERINTDLNDG NYNGYAGDIW SFGLSILEFY LGRFPLGENL
301: GKQGDWAALM CAICYSESPA APPTASPELR SFISCCLQKN PAKRPSAAQL LQHRFIASPP QQQPQVLAAP PC

Best Arabidopsis Sequence Match ( AT1G51660.1 )
(BLAST)

001: MRPIQSPPGV SVPVKSRPRR RPDLTLPLPQ RDVSLAVPLP LPPTSGGSGG SSGSAPSSGG SASSTNTNSS IEAKNYSDLV RGNRIGSGAG GTVYKVIHRP
101: SSRLYALKVI YGNHEETVRR QICREIEILR DVNHPNVVKC HEMFDQNGEI QVLLEFMDKG SLEGAHVWKE QQLADLSRQI LSGLAYLHSR HIVHRDIKPS
201: NLLINSAKNV KIADFGVSRI LAQTMDPCNS SVGTIAYMSP ERINTDLNQG KYDGYAGDIW SLGVSILEFY LGRFPFPVSR QGDWASLMCA ICMSQPPEAP
301: ATASPEFRHF ISCCLQREPG KRRSAMQLLQ HPFILRASPS QNRSPQNLHQ LLPPPRPLSS SSSPTT

Arabidopsis Description

MKK4MKK4 [Source:UniProtKB/TrEMBL;Acc:A0A178WCC0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.