CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX79176
CDX79801
CDX83459
CDX86029
CDX91876
CDX93837
CDX99153
CDY01279
CDY07174
CDY17911
CDY32299
CDY44256
CDY48504
CDY67475
CDY68772

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G51660.1	CDX93837	AT1G32380.1	21798944
AT1G51660.1	CDY01279	AT1G32380.1	21798944
AT1G51660.1	CDY32299	AT1G32380.1	21798944
AT1G51660.1	CDY68772	AT1G32380.1	21798944
AT1G51660.1	CDX79801	AT2G43790.1	19513235
AT1G51660.1	CDX83459	AT2G43790.1	19513235
AT1G51660.1	CDY17911	AT2G43790.1	19513235
AT1G51660.1	CDY44256	AT2G43790.1	19513235
AT1G51660.1	CDX79801	AT2G43790.1	21798944
AT1G51660.1	CDX83459	AT2G43790.1	21798944
AT1G51660.1	CDY17911	AT2G43790.1	21798944
AT1G51660.1	CDY44256	AT2G43790.1	21798944
AT1G51660.1	CDX86029	AT3G45640.1	19513235
AT1G51660.1	CDX99153	AT3G45640.1	19513235
AT1G51660.1	CDX86029	AT3G45640.1	21798944
AT1G51660.1	CDX99153	AT3G45640.1	21798944
AT1G51660.1	CDX79176	AT4G01090.1	21798944
AT1G51660.1	CDX91876	AT4G01090.1	21798944
AT1G51660.1	CDY07174	AT4G01090.1	21798944
AT1G51660.1	CDY48504	AT4G01090.1	21798944
AT1G51660.1	CDY67475	AT4G01090.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030430.1-P	Field mustard	cytosol, plastid	99.11	99.11
CDX87830	Canola	cytosol	61.42	96.28
CDY46547	Canola	cytosol, plastid	80.71	76.62
AT1G51660.1	Thale cress	plastid	83.09	76.5
CDY52951	Canola	cytosol	80.42	76.12
CDY27532	Canola	cytosol, plastid	71.51	73.7
CDY32415	Canola	cytosol, plastid	51.93	73.22
CDY37306	Canola	cytosol, plastid	71.22	72.51
CDX82209	Canola	plastid	69.73	71.21
CDX82210	Canola	plastid	64.09	70.59
HORVU7Hr1G031720.2	Barley	cytosol	52.82	66.67
GSMUA_Achr9P22810_001	Banana	cytosol	24.93	65.62
GSMUA_Achr9P13590_001	Banana	mitochondrion	45.4	65.11
Solyc03g123800.1.1	Tomato	nucleus	69.14	64.9
KRH47006	Soybean	cytosol, plastid	67.06	64.39
PGSC0003DMT400023739	Potato	plastid	70.62	64.32
OQU83236	Sorghum	cytosol	24.04	63.78
GSMUA_Achr4P05870_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	62.61	63.55
KRH44646	Soybean	cytosol, plastid	66.47	61.54
KXG19514	Sorghum	plastid	62.31	60.52
TraesCS7B01G059000.1	Wheat	plastid	61.13	59.71
CDY32414	Canola	extracellular, plasma membrane	64.09	59.67
TraesCS7D01G155100.1	Wheat	plastid	61.72	59.6
Zm00001d045064_P001	Maize	extracellular, plasma membrane	61.13	59.37
TraesCS7A01G154900.1	Wheat	plastid	61.13	59.03
Os06t0191300-01	Rice	plasma membrane	59.35	58.48
Os02t0787300-01	Rice	plasma membrane	62.61	57.18
Zm00001d018326_P001	Maize	plastid	59.94	56.74
HORVU5Hr1G067100.2	Barley	cytosol	38.87	56.47
VIT_09s0018g01820.t01	Wine grape	plastid	70.03	56.19
TraesCS6D01G328800.1	Wheat	cytosol, plastid	60.53	55.43
OQU85840	Sorghum	plastid	60.83	55.11
TraesCS6B01G379500.1	Wheat	cytosol, plastid	60.83	55.11
Zm00001d052066_P001	Maize	plastid	59.35	54.95
HORVU0Hr1G038850.2	Barley	cytosol	44.21	50.51
CDY71921	Canola	mitochondrion	44.81	49.35
CDX82067	Canola	mitochondrion	44.21	48.69
CDY11103	Canola	mitochondrion	43.92	48.21
CDX68224	Canola	mitochondrion	43.92	48.05
GSMUA_Achr3P05000_001	Banana	plastid	64.09	47.58
CDY24712	Canola	mitochondrion	41.54	44.16
CDY05240	Canola	mitochondrion	41.54	44.16
Os06t0191500-01	Rice	cytosol, plastid	39.47	43.46
CDX93844	Canola	cytosol	27.0	37.3
CDY32868	Canola	cytosol	27.89	36.72
CDY01289	Canola	cytosol	18.1	34.66
CDY64969	Canola	cytosol	33.83	34.23
CDY11913	Canola	cytosol	36.2	34.08
CDX88578	Canola	cytosol	36.2	34.08
CDX68588	Canola	cytosol	36.5	33.79
CDX92751	Canola	cytosol	35.01	33.43
CDY42757	Canola	cytosol	35.01	33.24
CDY43527	Canola	cytosol	35.61	32.97
CDY39283	Canola	plasma membrane, vacuole	33.23	31.73
CDX78589	Canola	mitochondrion	19.58	29.2
CDY70105	Canola	cytosol	25.22	27.78
CDX70576	Canola	cytosol	13.95	24.87
CDY42585	Canola	cytosol	33.83	22.01
CDY50119	Canola	cytosol	33.83	22.01
CDY40903	Canola	cytosol	30.86	19.19
CDY62124	Canola	cytosol	25.22	17.63
CDY69326	Canola	cytosol	25.22	17.6
CDY47150	Canola	cytosol	25.22	17.6
CDY11594	Canola	cytosol	25.82	15.56
CDY57851	Canola	cytosol	25.82	14.6
CDY09438	Canola	cytosol	25.52	14.29
CDY03750	Canola	cytosol	25.22	14.1
CDX95954	Canola	cytosol	30.86	13.42
CDX91026	Canola	cytosol	25.52	13.21
CDX85586	Canola	cytosol	25.52	13.21
CDY09880	Canola	cytosol	26.41	13.2
CDX69563	Canola	cytosol	26.11	13.08
CDY25260	Canola	cytosol	25.52	13.03
CDX94250	Canola	cytosol	25.52	12.95
CDY53517	Canola	mitochondrion	25.82	12.79
CDY54149	Canola	cytosol	29.97	12.77
CDX86848	Canola	mitochondrion	25.52	12.76
CDY50304	Canola	cytosol	29.97	12.47
CDX88555	Canola	cytosol	25.22	12.27
CDX67984	Canola	cytosol	24.63	12.19
CDX87368	Canola	cytosol	25.22	12.06
CDY03490	Canola	mitochondrion	25.22	11.96
CDX79332	Canola	cytosol	24.63	11.86
CDX76327	Canola	mitochondrion	25.22	11.84
CDX97641	Canola	cytosol	23.15	11.54
CDX98536	Canola	cytosol	23.15	11.54
CDY45937	Canola	cytosol	22.85	11.26
CDY25875	Canola	plastid	22.85	9.87
CDX73633	Canola	cytosol	5.93	9.09
CDY25732	Canola	plastid	9.79	6.02
CDY70962	Canola	cytosol	5.64	5.21
CDY40902	Canola	nucleus	0.3	0.4
CDY03491	Canola	plastid	0.0	0.0
CDX76326	Canola	plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.1	Gene3D:3.30.200.20	GO:A0A078HZ81	UniProt:A0A078HZ81	EnsemblPlants:CDY43920
ProteinID:CDY43920	ProteinID:CDY43920.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00077511001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF319	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EDB9A5	SEG:seg	:	:

Description

BnaA05g15300DBnaA05g15300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZ81]

Coordinates

chrLK032573:+:152494..153653

Molecular Weight (calculated)

37355.9 Da

IEP (calculated)

9.839

GRAVY (calculated)

-0.396

Length

337 amino acids

Sequence
(BLAST)

001: MKPIQPPPGV TGPVKNRPRR RPDLSLPLPH RDVSLAVPLP LPPTSGGSTT SEPKSYSDLV RGNRIGSGAG GTVYKVVHRP TSRVYALKIL NGNHDDTVRG
101: HICREIKILR DVNHPNVVKC HEMFDHNGEI QVLLEFMDQG SLEGAHVSNE QHLSDLSRQI LKGLAYLHGR HIVHRDIKPS NLLINSDNNV KIADFGVSRV
201: LAQTLSPCKS SVGTIAYMSP ERINTDLNQG MYDGRAGDIW SFGVSVLEFF LGRFPFNVNR LGDWASLMCA ICMSKPPEAP ATASPEFRHF VSCCLQREPA
301: RRQTAVQLLQ HPFVRRGASQ SQNRSPQNLH QLLPPPH

Best Arabidopsis Sequence Match ( AT1G51660.1 )
(BLAST)

001: MRPIQSPPGV SVPVKSRPRR RPDLTLPLPQ RDVSLAVPLP LPPTSGGSGG SSGSAPSSGG SASSTNTNSS IEAKNYSDLV RGNRIGSGAG GTVYKVIHRP
101: SSRLYALKVI YGNHEETVRR QICREIEILR DVNHPNVVKC HEMFDQNGEI QVLLEFMDKG SLEGAHVWKE QQLADLSRQI LSGLAYLHSR HIVHRDIKPS
201: NLLINSAKNV KIADFGVSRI LAQTMDPCNS SVGTIAYMSP ERINTDLNQG KYDGYAGDIW SLGVSILEFY LGRFPFPVSR QGDWASLMCA ICMSQPPEAP
301: ATASPEFRHF ISCCLQREPG KRRSAMQLLQ HPFILRASPS QNRSPQNLHQ LLPPPRPLSS SSSPTT

Arabidopsis Description

MKK4MKK4 [Source:UniProtKB/TrEMBL;Acc:A0A178WCC0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.