CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX79801
CDX83459
CDY17911
CDY44256

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G21220.1	CDX79801	AT2G43790.1	19513235
AT3G21220.1	CDX83459	AT2G43790.1	19513235
AT3G21220.1	CDY17911	AT2G43790.1	19513235
AT3G21220.1	CDY44256	AT2G43790.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023894.1-P	Field mustard	cytosol, plastid	99.4	99.4
CDY27532	Canola	cytosol, plastid	97.28	98.47
CDY32415	Canola	cytosol, plastid	63.14	87.45
AT3G21220.1	Thale cress	cytosol, plastid	89.12	84.77
CDX82209	Canola	plastid	83.69	83.94
CDX82210	Canola	plastid	75.23	81.37
CDY43920	Canola	cytosol, plastid	72.51	71.22
CDY46547	Canola	cytosol, plastid	76.13	70.99
CDX87830	Canola	cytosol	45.92	70.7
CDY52951	Canola	cytosol	75.53	70.22
CDY32414	Canola	extracellular, plasma membrane	75.53	69.06
Solyc03g123800.1.1	Tomato	nucleus	72.21	66.57
HORVU7Hr1G031720.2	Barley	cytosol	53.47	66.29
GSMUA_Achr9P13590_001	Banana	mitochondrion	46.83	65.96
PGSC0003DMT400023739	Potato	plastid	73.41	65.68
KRH47006	Soybean	cytosol, plastid	67.07	63.25
KRH44646	Soybean	cytosol, plastid	68.28	62.09
GSMUA_Achr4P05870_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	61.63	61.45
GSMUA_Achr9P22810_001	Banana	cytosol	23.57	60.94
OQU83236	Sorghum	cytosol	23.26	60.63
Os06t0191300-01	Rice	plasma membrane	62.54	60.53
KXG19514	Sorghum	plastid	63.14	60.23
TraesCS7B01G059000.1	Wheat	plastid	62.24	59.71
Zm00001d045064_P001	Maize	extracellular, plasma membrane	62.54	59.65
TraesCS7A01G154900.1	Wheat	plastid	62.24	59.03
TraesCS7D01G155100.1	Wheat	plastid	62.24	59.03
HORVU5Hr1G067100.2	Barley	cytosol	40.79	58.19
Zm00001d018326_P001	Maize	plastid	62.54	58.15
TraesCS6B01G379500.1	Wheat	cytosol, plastid	65.26	58.06
Os02t0787300-01	Rice	plasma membrane	64.65	57.99
TraesCS6D01G328800.1	Wheat	cytosol, plastid	64.35	57.88
Zm00001d052066_P001	Maize	plastid	63.14	57.42
OQU85840	Sorghum	plastid	64.35	57.26
VIT_09s0018g01820.t01	Wine grape	plastid	72.51	57.14
HORVU0Hr1G038850.2	Barley	cytosol	47.13	52.88
CDY71921	Canola	mitochondrion	45.92	49.67
CDX82067	Canola	mitochondrion	45.32	49.02
CDY11103	Canola	mitochondrion	45.02	48.53
CDX68224	Canola	mitochondrion	45.02	48.38
GSMUA_Achr3P05000_001	Banana	plastid	64.65	47.14
CDY05240	Canola	mitochondrion	43.2	45.11
CDY24712	Canola	mitochondrion	43.2	45.11
Os06t0191500-01	Rice	cytosol, plastid	41.39	44.77
CDX93844	Canola	cytosol	27.49	37.3
CDY32868	Canola	cytosol	28.4	36.72
CDY01289	Canola	cytosol	18.73	35.23
CDY64969	Canola	cytosol	35.35	35.14
CDX88578	Canola	cytosol	37.16	34.36
CDY11913	Canola	cytosol	37.16	34.36
CDX92751	Canola	cytosol	35.65	33.43
CDY42757	Canola	cytosol	35.65	33.24
CDX68588	Canola	cytosol	35.65	32.42
CDY43527	Canola	cytosol	35.05	31.87
CDY39283	Canola	plasma membrane, vacuole	33.84	31.73
CDX78589	Canola	mitochondrion	18.73	27.43
CDY70105	Canola	cytosol	24.77	26.8
CDX70576	Canola	cytosol	13.29	23.28
CDY50119	Canola	cytosol	34.44	22.01
CDY42585	Canola	cytosol	34.44	22.01
CDY40903	Canola	cytosol	30.21	18.45
CDY62124	Canola	cytosol	24.77	17.01
CDY69326	Canola	cytosol	24.77	16.98
CDY47150	Canola	cytosol	24.77	16.98
CDY11594	Canola	cytosol	23.26	13.77
CDY57851	Canola	cytosol	23.26	12.92
CDX91026	Canola	cytosol	25.38	12.9
CDX85586	Canola	cytosol	25.38	12.9
CDX95954	Canola	cytosol	29.91	12.77
CDY54149	Canola	cytosol	30.21	12.64
CDX69563	Canola	cytosol	25.68	12.63
CDY09438	Canola	cytosol	22.96	12.62
CDY09880	Canola	cytosol	25.68	12.61
CDY03750	Canola	cytosol	22.66	12.44
CDY25260	Canola	cytosol	24.77	12.42
CDX94250	Canola	cytosol	24.77	12.35
CDY50304	Canola	cytosol	30.21	12.35
CDY53517	Canola	mitochondrion	25.08	12.21
CDX86848	Canola	mitochondrion	24.77	12.17
CDY45937	Canola	cytosol	24.77	11.99
CDX97641	Canola	cytosol	24.17	11.83
CDX98536	Canola	cytosol	24.17	11.83
CDX88555	Canola	cytosol	24.47	11.69
CDX67984	Canola	cytosol	23.87	11.6
CDX87368	Canola	cytosol	24.47	11.49
CDY03490	Canola	mitochondrion	24.47	11.39
CDX73633	Canola	cytosol	7.55	11.36
CDX79332	Canola	cytosol	23.87	11.29
CDX76327	Canola	mitochondrion	24.47	11.28
CDY25875	Canola	plastid	24.77	10.51
CDY25732	Canola	plastid	9.97	6.02
CDY70962	Canola	cytosol	4.53	4.11
CDX76326	Canola	plastid	0.0	0.0
CDY03491	Canola	plastid	0.0	0.0
CDY40902	Canola	nucleus	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.1	Gene3D:3.30.200.20	GO:A0A078HHT0	UniProt:A0A078HHT0	EnsemblPlants:CDY37306
ProteinID:CDY37306	ProteinID:CDY37306.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00063829001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF319	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE3B41	SEG:seg	:	:

Description

BnaA01g25260DBnaA01g25260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HHT0]

Coordinates

chrLK032397:-:244749..245744

Molecular Weight (calculated)

36607.9 Da

IEP (calculated)

8.042

GRAVY (calculated)

-0.290

Length

331 amino acids

Sequence
(BLAST)

001: MNPIQPPPSP MKSRFRKRPD LSLPLPNRDV ALAVPLPLPP PPSTTSAPTS GSAISPNVSA AKSLSELERV NRIGSGAGGT VYKVIHRPTS KPFALKVIYG
101: NHEDNVRRQI CREIEILRSV DHANVVKCHD MFDHNGEIQV LLEFMDGGCL EGVHVSREEE LSDMSRQILS GLAYLHRHHI VHRDIKPSNL LIDSEKNVKI
201: ADFGVSRILA QTMDPCNSSV GTIAYMSPER INTDLNHGRY NGYAGDVWSL GVSILEFYLG RFPFAVSRQG DWASLMCAIC MSQPPEAPAT ASEEFRHFVS
301: CCLQSDPPKR WSAQQLLQHP FILKSTRAPG S

Best Arabidopsis Sequence Match ( AT3G21220.2 )
(BLAST)

001: MKPIQSPSGV ASPMKNRLRK RPDLSLPLPH RDVALAVPLP LPPPSSSSSA PASSSAISTN ISAAKSLSEL ERVNRIGSGA GGTVYKVIHT PTSRPFALKV
101: IYGNHEDTVR RQICREIEIL RSVDHPNVVK CHDMFDHNGE IQVLLEFMDQ GSLEGAHIWQ EQELADLSRQ ILSGLAYLHR RHIVHRDIKP SNLLINSAKN
201: VKIADFGVSR ILAQTMDPCN SSVGTIAYMS PERINTDLNH GRYDGYAGDV WSLGVSILEF YLGRFPFAVS RQGDWASLMC AICMSQPPEA PATASQEFRH
301: FVSCCLQSDP PKRWSAQQLL QHPFILKATG GPNLRQMLPP PRPLPSAS

Arabidopsis Description

MKK5MKK5 [Source:UniProtKB/TrEMBL;Acc:A0A178VIK5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.