Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
cytosol:
23758924
nucleus: 23758924 |
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G40440.1 | CDY44551 | AT1G59580.1 | 19513235 |
| AT5G40440.1 | CDY45885 | AT1G59580.1 | 19513235 |
| AT5G40440.1 | CDY30325 | AT2G18170.1 | 19513235 |
| AT5G40440.1 | CDY46308 | AT2G18170.1 | 19513235 |
| AT5G40440.1 | CDY53276 | AT2G18170.1 | 19513235 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025576.1-P | Field mustard | cytosol | 98.65 | 98.65 |
| CDY42585 | Canola | cytosol | 98.46 | 98.46 |
| AT5G40440.1 | Thale cress | cytosol | 93.05 | 92.69 |
| KRH56582 | Soybean | cytosol | 79.54 | 79.54 |
| VIT_14s0066g00670.t01 | Wine grape | cytosol | 78.76 | 78.76 |
| KRG93261 | Soybean | cytosol | 79.54 | 78.33 |
| Solyc03g019850.2.1 | Tomato | cytosol | 75.48 | 75.92 |
| PGSC0003DMT400039329 | Potato | cytosol | 75.48 | 75.92 |
| GSMUA_Achr9P18710_001 | Banana | cytosol | 43.24 | 75.68 |
| Os06t0473200-02 | Rice | cytosol | 47.68 | 69.58 |
| HORVU5Hr1G125270.1 | Barley | cytosol | 48.65 | 67.38 |
| KXG24971 | Sorghum | cytosol | 66.8 | 66.16 |
| GSMUA_Achr9P18700_001 | Banana | cytosol | 28.57 | 64.63 |
| TraesCS5A01G122700.4 | Wheat | cytosol | 37.26 | 64.55 |
| TraesCS5D01G549600.1 | Wheat | cytosol | 64.09 | 63.48 |
| HORVU5Hr1G125290.3 | Barley | cytosol | 63.71 | 63.1 |
| Zm00001d013510_P002 | Maize | cytosol | 38.8 | 62.81 |
| Zm00001d041092_P001 | Maize | plasma membrane | 66.41 | 58.01 |
| TraesCS5D01G130900.2 | Wheat | cytosol | 56.56 | 55.81 |
| TraesCS5B01G122600.1 | Wheat | cytosol | 49.81 | 54.2 |
| TraesCS5B01G565100.3 | Wheat | cytosol | 50.0 | 49.33 |
| CDY32868 | Canola | cytosol | 20.46 | 41.41 |
| CDX87830 | Canola | cytosol | 16.8 | 40.47 |
| CDY64969 | Canola | cytosol | 25.29 | 39.34 |
| CDX88578 | Canola | cytosol | 26.83 | 38.83 |
| CDX68588 | Canola | cytosol | 27.03 | 38.46 |
| CDY11913 | Canola | cytosol | 26.45 | 38.27 |
| CDY43527 | Canola | cytosol | 26.83 | 38.19 |
| CDX82067 | Canola | mitochondrion | 22.39 | 37.91 |
| CDY71921 | Canola | mitochondrion | 22.2 | 37.58 |
| CDX82210 | Canola | plastid | 22.01 | 37.25 |
| CDY11103 | Canola | mitochondrion | 22.01 | 37.13 |
| CDX68224 | Canola | mitochondrion | 21.81 | 36.69 |
| CDX92751 | Canola | cytosol | 24.9 | 36.54 |
| CDY42757 | Canola | cytosol | 24.9 | 36.34 |
| CDY27532 | Canola | cytosol, plastid | 22.01 | 34.86 |
| CDX82209 | Canola | plastid | 22.2 | 34.85 |
| CDY32415 | Canola | cytosol, plastid | 16.02 | 34.73 |
| CDY05240 | Canola | mitochondrion | 21.24 | 34.7 |
| CDY37306 | Canola | cytosol, plastid | 22.01 | 34.44 |
| CDY24712 | Canola | mitochondrion | 21.04 | 34.38 |
| CDY39283 | Canola | plasma membrane, vacuole | 23.36 | 34.28 |
| CDY43920 | Canola | cytosol, plastid | 22.01 | 33.83 |
| CDY46547 | Canola | cytosol, plastid | 23.17 | 33.8 |
| CDY52951 | Canola | cytosol | 23.17 | 33.71 |
| CDY32414 | Canola | extracellular, plasma membrane | 22.59 | 32.32 |
| CDX93844 | Canola | cytosol | 14.09 | 29.92 |
| CDX78589 | Canola | mitochondrion | 11.78 | 26.99 |
| CDY70105 | Canola | cytosol | 15.83 | 26.8 |
| CDY01289 | Canola | cytosol | 9.07 | 26.7 |
| CDX70576 | Canola | cytosol | 8.69 | 23.81 |
| Zm00001d004610_P001 | Maize | cytosol | 6.56 | 18.99 |
| CDY69326 | Canola | cytosol | 16.99 | 18.22 |
| CDY47150 | Canola | cytosol | 16.99 | 18.22 |
| CDY62124 | Canola | cytosol | 16.8 | 18.05 |
| CDY11594 | Canola | cytosol | 18.92 | 17.53 |
| CDY40903 | Canola | cytosol | 17.76 | 16.97 |
| CDY57851 | Canola | cytosol | 19.11 | 16.61 |
| CDY03750 | Canola | cytosol | 19.11 | 16.42 |
| CDY09438 | Canola | cytosol | 18.92 | 16.28 |
| CDX85586 | Canola | cytosol | 18.73 | 14.9 |
| CDX91026 | Canola | cytosol | 18.73 | 14.9 |
| CDY09880 | Canola | cytosol | 19.3 | 14.84 |
| CDY45937 | Canola | cytosol | 19.5 | 14.77 |
| CDX69563 | Canola | cytosol | 19.11 | 14.71 |
| CDY25260 | Canola | cytosol | 18.73 | 14.7 |
| CDX67984 | Canola | cytosol | 19.3 | 14.68 |
| CDX97641 | Canola | cytosol | 19.11 | 14.64 |
| CDX98536 | Canola | cytosol | 19.11 | 14.64 |
| CDX94250 | Canola | cytosol | 18.73 | 14.61 |
| CDY53517 | Canola | mitochondrion | 19.11 | 14.56 |
| CDX86848 | Canola | mitochondrion | 18.73 | 14.39 |
| CDX88555 | Canola | cytosol | 19.11 | 14.29 |
| CDX79332 | Canola | cytosol | 19.3 | 14.29 |
| CDX87368 | Canola | cytosol | 19.11 | 14.04 |
| CDY03490 | Canola | mitochondrion | 18.53 | 13.5 |
| CDX76327 | Canola | mitochondrion | 18.53 | 13.37 |
| CDY25875 | Canola | plastid | 19.69 | 13.08 |
| CDX95954 | Canola | cytosol | 19.5 | 13.03 |
| CDY54149 | Canola | cytosol | 18.73 | 12.26 |
| CDY50304 | Canola | cytosol | 18.53 | 11.85 |
| CDY25732 | Canola | plastid | 9.07 | 8.58 |
| CDY70962 | Canola | cytosol | 5.41 | 7.67 |
| CDX73633 | Canola | cytosol | 2.7 | 6.36 |
| CDY40902 | Canola | nucleus | 1.74 | 3.64 |
| CDX76326 | Canola | plastid | 0.0 | 0.0 |
| CDY03491 | Canola | plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.2.1 | Gene3D:3.10.450.50 | Gene3D:3.30.200.20 | EnsemblPlants:CDY50119 | ProteinID:CDY50119 |
| ProteinID:CDY50119.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00095932001 | InterPro:IPR000719 |
| InterPro:IPR018222 | InterPro:Kinase-like_dom_sf | InterPro:NTF2-like_dom_sf | InterPro:Nuclear_transport_factor_2_euk | PFAM:PF00069 | ScanProsite:PS00107 |
| ScanProsite:PS00108 | PFscan:PS50011 | PFscan:PS50177 | PANTHER:PTHR24361 | PANTHER:PTHR24361:SF487 | InterPro:Prot_kinase_dom |
| InterPro:Protein_kinase_ATP_BS | GO:S4TG52 | UniProt:S4TG52 | SMART:SM00220 | SUPFAM:SSF54427 | SUPFAM:SSF56112 |
| InterPro:Ser/Thr_kinase_AS | UniParc:UPI0003555760 | SEG:seg | : | : | : |
Description
BnaC04g32540DBnaC04g32540D protein [Source:UniProtKB/TrEMBL;Acc:S4TG52]
Coordinates
chrLK032882:+:48825..51734
Molecular Weight (calculated)
57408.5 Da
IEP (calculated)
5.576
GRAVY (calculated)
-0.137
Length
518 amino acids
Sequence
(BLAST)
(BLAST)
001: MAALEELKKK LSPLFDAEKG FSSSSSLDPN DSYLLSDGGT VNLLSRSYGV YNFNELGLQK CTTSLVDESE SSETTYQCAS HEMRVFGAIG SGASSVVQRA
101: IHIPKHRLLA LKRINIFERE KRQQLLTEIR TLCEAPCHEG LVDFHGAFYS PDSGQISIAL EYMDGGSLAD ILKVTKKIPE PVLSSMFHKL LQGLSYLHGV
201: RHLVHRDIKP ANLLVNLKGE PKITDFGISS GLENSMAMCA TFVGTVTYMS PERIRNDGYS YPADIWSLGL ALFECGTGEF PYIANEGPVN LMLQILDDPS
301: PTPSKQEFSP EFCSFIDVCL QKDADARPTA DQLLSHPFIT KHEKESVDLA AFVRSIFDPT QRLKDIADML TIHYYSLFDG YDDLWHHARS LYTETSVFSF
401: SGKQYTGSTE ILSQLSNIRN TLAGDLPSEK LVHVVEKLQC KPHGVGGVMI RAIGSFIVGN QFLICGDGVQ AEGLPSFKDL GFDLGTRRVG RFQEQFVVES
501: GDLIGRYFIA KQELYITS
101: IHIPKHRLLA LKRINIFERE KRQQLLTEIR TLCEAPCHEG LVDFHGAFYS PDSGQISIAL EYMDGGSLAD ILKVTKKIPE PVLSSMFHKL LQGLSYLHGV
201: RHLVHRDIKP ANLLVNLKGE PKITDFGISS GLENSMAMCA TFVGTVTYMS PERIRNDGYS YPADIWSLGL ALFECGTGEF PYIANEGPVN LMLQILDDPS
301: PTPSKQEFSP EFCSFIDVCL QKDADARPTA DQLLSHPFIT KHEKESVDLA AFVRSIFDPT QRLKDIADML TIHYYSLFDG YDDLWHHARS LYTETSVFSF
401: SGKQYTGSTE ILSQLSNIRN TLAGDLPSEK LVHVVEKLQC KPHGVGGVMI RAIGSFIVGN QFLICGDGVQ AEGLPSFKDL GFDLGTRRVG RFQEQFVVES
501: GDLIGRYFIA KQELYITS
001: MAALEELKKK LSPLFDAEKG FSSSSSLDPN DSYLLSDGGT VNLLSRSYGV YNFNELGLQK CTSSHVDESE SSETTYQCAS HEMRVFGAIG SGASSVVQRA
101: IHIPNHRILA LKKINIFERE KRQQLLTEIR TLCEAPCHEG LVDFHGAFYS PDSGQISIAL EYMNGGSLAD ILKVTKKIPE PVLSSLFHKL LQGLSYLHGV
201: RHLVHRDIKP ANLLINLKGE PKITDFGISA GLENSMAMCA TFVGTVTYMS PERIRNDSYS YPADIWSLGL ALFECGTGEF PYIANEGPVN LMLQILDDPS
301: PTPPKQEFSP EFCSFIDACL QKDPDARPTA DQLLSHPFIT KHEKERVDLA TFVQSIFDPT QRLKDLADML TIHYYSLFDG FDDLWHHAKS LYTETSVFSF
401: SGKHNTGSTE IFSALSDIRN TLTGDLPSEK LVHVVEKLHC KPCGSGGVII RAVGSFIVGN QFLICGDGVQ AEGLPSFKDL GFDVASRRVG RFQEQFVVES
501: GDLIGKYFLA KQELYITNLD
101: IHIPNHRILA LKKINIFERE KRQQLLTEIR TLCEAPCHEG LVDFHGAFYS PDSGQISIAL EYMNGGSLAD ILKVTKKIPE PVLSSLFHKL LQGLSYLHGV
201: RHLVHRDIKP ANLLINLKGE PKITDFGISA GLENSMAMCA TFVGTVTYMS PERIRNDSYS YPADIWSLGL ALFECGTGEF PYIANEGPVN LMLQILDDPS
301: PTPPKQEFSP EFCSFIDACL QKDPDARPTA DQLLSHPFIT KHEKERVDLA TFVQSIFDPT QRLKDLADML TIHYYSLFDG FDDLWHHAKS LYTETSVFSF
401: SGKHNTGSTE IFSALSDIRN TLTGDLPSEK LVHVVEKLHC KPCGSGGVII RAVGSFIVGN QFLICGDGVQ AEGLPSFKDL GFDVASRRVG RFQEQFVVES
501: GDLIGKYFLA KQELYITNLD
Arabidopsis Description
MKK3Mitogen-activated protein kinase kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:O80396]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.