CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX79801
CDX83459
CDY17911
CDY44256

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G21220.1	CDX79801	AT2G43790.1	19513235
AT3G21220.1	CDX83459	AT2G43790.1	19513235
AT3G21220.1	CDY17911	AT2G43790.1	19513235
AT3G21220.1	CDY44256	AT2G43790.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001818.1-P	Field mustard	plastid	98.79	98.79
CDY32415	Canola	cytosol, plastid	71.21	98.33
CDX82210	Canola	plastid	82.12	88.56
AT3G21220.1	Thale cress	cytosol, plastid	90.0	85.34
CDY27532	Canola	cytosol, plastid	83.64	84.4
CDY37306	Canola	cytosol, plastid	83.94	83.69
CDX87830	Canola	cytosol	48.18	73.95
CDY32414	Canola	extracellular, plasma membrane	79.39	72.38
CDY46547	Canola	cytosol, plastid	76.36	70.99
CDY52951	Canola	cytosol	76.36	70.79
CDY43920	Canola	cytosol, plastid	71.21	69.73
HORVU7Hr1G031720.2	Barley	cytosol	55.45	68.54
Solyc03g123800.1.1	Tomato	nucleus	72.73	66.85
PGSC0003DMT400023739	Potato	plastid	73.94	65.95
GSMUA_Achr9P13590_001	Banana	mitochondrion	45.15	63.4
GSMUA_Achr9P22810_001	Banana	cytosol	24.55	63.28
KRH47006	Soybean	cytosol, plastid	67.27	63.25
GSMUA_Achr4P05870_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	61.82	61.45
KRH44646	Soybean	cytosol, plastid	67.58	61.26
OQU83236	Sorghum	cytosol	23.33	60.63
KXG19514	Sorghum	plastid	63.64	60.52
HORVU5Hr1G067100.2	Barley	cytosol	42.42	60.34
Zm00001d045064_P001	Maize	extracellular, plasma membrane	63.33	60.23
TraesCS7B01G059000.1	Wheat	plastid	62.42	59.71
Os06t0191300-01	Rice	plasma membrane	61.82	59.65
TraesCS7A01G154900.1	Wheat	plastid	62.42	59.03
TraesCS7D01G155100.1	Wheat	plastid	62.12	58.74
Zm00001d018326_P001	Maize	plastid	62.42	57.87
VIT_09s0018g01820.t01	Wine grape	plastid	73.33	57.62
Os02t0787300-01	Rice	plasma membrane	64.24	57.45
TraesCS6D01G328800.1	Wheat	cytosol, plastid	63.64	57.07
Zm00001d052066_P001	Maize	plastid	62.73	56.87
OQU85840	Sorghum	plastid	63.94	56.72
TraesCS6B01G379500.1	Wheat	cytosol, plastid	63.94	56.72
HORVU0Hr1G038850.2	Barley	cytosol	47.88	53.56
CDY71921	Canola	mitochondrion	44.85	48.37
CDX82067	Canola	mitochondrion	44.24	47.71
CDY11103	Canola	mitochondrion	43.94	47.23
CDX68224	Canola	mitochondrion	43.94	47.08
GSMUA_Achr3P05000_001	Banana	plastid	64.24	46.7
CDY24712	Canola	mitochondrion	42.42	44.16
CDY05240	Canola	mitochondrion	42.42	44.16
Os06t0191500-01	Rice	cytosol, plastid	38.79	41.83
CDY32868	Canola	cytosol	30.3	39.06
CDX93844	Canola	cytosol	27.27	36.89
CDX88578	Canola	cytosol	38.18	35.2
CDY11913	Canola	cytosol	38.18	35.2
CDY64969	Canola	cytosol	35.45	35.14
CDX92751	Canola	cytosol	36.67	34.28
CDY42757	Canola	cytosol	36.67	34.08
CDY01289	Canola	cytosol	17.88	33.52
CDX68588	Canola	cytosol	36.06	32.69
CDY39283	Canola	plasma membrane, vacuole	34.85	32.58
CDY43527	Canola	cytosol	35.76	32.42
CDX78589	Canola	mitochondrion	18.48	26.99
CDY70105	Canola	cytosol	24.85	26.8
CDX70576	Canola	cytosol	13.94	24.34
CDY50119	Canola	cytosol	34.85	22.2
CDY42585	Canola	cytosol	34.85	22.2
CDY40903	Canola	cytosol	29.39	17.9
CDY62124	Canola	cytosol	24.24	16.6
CDY47150	Canola	cytosol	24.24	16.56
CDY69326	Canola	cytosol	24.24	16.56
CDY11594	Canola	cytosol	25.15	14.85
CDY57851	Canola	cytosol	25.15	13.93
CDY09438	Canola	cytosol	24.55	13.46
CDY03750	Canola	cytosol	24.24	13.27
CDX91026	Canola	cytosol	26.06	13.21
CDX85586	Canola	cytosol	26.06	13.21
CDX69563	Canola	cytosol	26.67	13.08
CDY09880	Canola	cytosol	26.67	13.06
CDX95954	Canola	cytosol	29.7	12.65
CDY25260	Canola	cytosol	25.15	12.58
CDX94250	Canola	cytosol	25.15	12.5
CDX98536	Canola	cytosol	25.45	12.43
CDX97641	Canola	cytosol	25.45	12.43
CDX88555	Canola	cytosol	26.06	12.41
CDY54149	Canola	cytosol	29.7	12.39
CDX67984	Canola	cytosol	25.45	12.33
CDX86848	Canola	mitochondrion	25.15	12.31
CDY53517	Canola	mitochondrion	25.15	12.21
CDX87368	Canola	cytosol	26.06	12.2
CDY45937	Canola	cytosol	25.15	12.13
CDY50304	Canola	cytosol	29.7	12.1
CDX79332	Canola	cytosol	25.45	12.0
CDY03490	Canola	mitochondrion	25.45	11.81
CDX76327	Canola	mitochondrion	25.45	11.7
CDY25875	Canola	plastid	25.15	10.64
CDX73633	Canola	cytosol	6.36	9.55
CDY25732	Canola	plastid	10.61	6.39
CDY70962	Canola	cytosol	4.85	4.38
CDY40902	Canola	nucleus	0.3	0.4
CDX76326	Canola	plastid	0.0	0.0
CDY03491	Canola	plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.1	Gene3D:3.30.200.20	GO:A0A078D1T8	EnsemblPlants:CDX82209	ProteinID:CDX82209
ProteinID:CDX82209.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00137300001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF319	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EF1C4F	SEG:seg	:	:

Description

BnaA03g36120D

Coordinates

chrLK031828:-:8724..9762

Molecular Weight (calculated)

36468.8 Da

IEP (calculated)

8.867

GRAVY (calculated)

-0.242

Length

330 amino acids

Sequence
(BLAST)

001: MRRNKRPDLS LPLPNRNVAL AVPLPLPPPP SSSSALASSS AISTNISAAK RLSELARVNR IGSGAGGTVY KVIHLPTSRP FALKVIYGNH DDNVRRQICR
101: EIEILRSVDH PNVVKCHDMF DHNGEVQVLL EFMDKGSLEG RHVSREDELA DLTRQILSGL AYIHRRHIVH RDIKPSNLLI NSANNVKIAD FGVSRILAQT
201: MDPCNSSVGT IAYMSPERIN TDLNHGRYDG YAGDIWSLGV SVLEFYLGRF PFAVSRQGDW ASLMCAICMT QPPEAPATAS EDFRHFISCC LQSDPPKRWS
301: AQQLLQHPFI VKSSGGLNLR QMLPPPPPAS

Best Arabidopsis Sequence Match ( AT3G21220.2 )
(BLAST)

001: MKPIQSPSGV ASPMKNRLRK RPDLSLPLPH RDVALAVPLP LPPPSSSSSA PASSSAISTN ISAAKSLSEL ERVNRIGSGA GGTVYKVIHT PTSRPFALKV
101: IYGNHEDTVR RQICREIEIL RSVDHPNVVK CHDMFDHNGE IQVLLEFMDQ GSLEGAHIWQ EQELADLSRQ ILSGLAYLHR RHIVHRDIKP SNLLINSAKN
201: VKIADFGVSR ILAQTMDPCN SSVGTIAYMS PERINTDLNH GRYDGYAGDV WSLGVSILEF YLGRFPFAVS RQGDWASLMC AICMSQPPEA PATASQEFRH
301: FVSCCLQSDP PKRWSAQQLL QHPFILKATG GPNLRQMLPP PRPLPSAS

Arabidopsis Description

MKK5MKK5 [Source:UniProtKB/TrEMBL;Acc:A0A178VIK5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.