CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX79801
CDX83459
CDY17911
CDY44256

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G21220.1	CDX79801	AT2G43790.1	19513235
AT3G21220.1	CDX83459	AT2G43790.1	19513235
AT3G21220.1	CDY17911	AT2G43790.1	19513235
AT3G21220.1	CDY44256	AT2G43790.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023894.1-P	Field mustard	cytosol, plastid	98.47	97.28
CDY37306	Canola	cytosol, plastid	98.47	97.28
CDY32415	Canola	cytosol, plastid	63.3	86.61
AT3G21220.1	Thale cress	cytosol, plastid	90.52	85.06
CDX82209	Canola	plastid	84.4	83.64
CDX82210	Canola	plastid	75.84	81.05
CDY43920	Canola	cytosol, plastid	73.7	71.51
CDY46547	Canola	cytosol, plastid	76.76	70.7
CDX87830	Canola	cytosol	46.48	70.7
CDY52951	Canola	cytosol	76.15	69.94
CDY32414	Canola	extracellular, plasma membrane	76.15	68.78
Solyc03g123800.1.1	Tomato	nucleus	72.48	66.02
HORVU7Hr1G031720.2	Barley	cytosol	53.82	65.92
GSMUA_Achr9P13590_001	Banana	mitochondrion	47.09	65.53
PGSC0003DMT400023739	Potato	plastid	73.7	65.14
KRH47006	Soybean	cytosol, plastid	67.58	62.96
KRH44646	Soybean	cytosol, plastid	68.81	61.81
GSMUA_Achr4P05870_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	62.08	61.14
GSMUA_Achr9P22810_001	Banana	cytosol	23.85	60.94
OQU83236	Sorghum	cytosol	23.55	60.63
Os06t0191300-01	Rice	plasma membrane	63.0	60.23
KXG19514	Sorghum	plastid	63.61	59.94
TraesCS7B01G059000.1	Wheat	plastid	62.69	59.42
Zm00001d045064_P001	Maize	extracellular, plasma membrane	63.0	59.37
TraesCS7A01G154900.1	Wheat	plastid	62.69	58.74
TraesCS7D01G155100.1	Wheat	plastid	62.69	58.74
Zm00001d018326_P001	Maize	plastid	63.0	57.87
TraesCS6B01G379500.1	Wheat	cytosol, plastid	65.75	57.8
HORVU5Hr1G067100.2	Barley	cytosol	40.98	57.76
Os02t0787300-01	Rice	plasma membrane	65.14	57.72
TraesCS6D01G328800.1	Wheat	cytosol, plastid	64.83	57.61
VIT_09s0018g01820.t01	Wine grape	plastid	73.7	57.38
Zm00001d052066_P001	Maize	plastid	63.61	57.14
OQU85840	Sorghum	plastid	64.83	56.99
HORVU0Hr1G038850.2	Barley	cytosol	47.71	52.88
CDY71921	Canola	mitochondrion	46.48	49.67
CDX82067	Canola	mitochondrion	45.87	49.02
CDY11103	Canola	mitochondrion	45.57	48.53
CDX68224	Canola	mitochondrion	45.57	48.38
GSMUA_Achr3P05000_001	Banana	plastid	65.14	46.92
CDY24712	Canola	mitochondrion	43.73	45.11
CDY05240	Canola	mitochondrion	43.73	45.11
Os06t0191500-01	Rice	cytosol, plastid	41.59	44.44
CDX93844	Canola	cytosol	27.52	36.89
CDY32868	Canola	cytosol	28.75	36.72
CDY64969	Canola	cytosol	36.09	35.44
CDY01289	Canola	cytosol	18.65	34.66
CDY11913	Canola	cytosol	37.92	34.64
CDX88578	Canola	cytosol	37.92	34.64
CDX92751	Canola	cytosol	36.39	33.71
CDY42757	Canola	cytosol	36.39	33.52
CDX68588	Canola	cytosol	36.39	32.69
CDY43527	Canola	cytosol	35.78	32.14
CDY39283	Canola	plasma membrane, vacuole	34.56	32.01
CDX78589	Canola	mitochondrion	18.96	27.43
CDY70105	Canola	cytosol	25.08	26.8
CDX70576	Canola	cytosol	13.46	23.28
CDY50119	Canola	cytosol	34.86	22.01
CDY42585	Canola	cytosol	34.86	22.01
CDY40903	Canola	cytosol	30.58	18.45
CDY62124	Canola	cytosol	25.08	17.01
CDY47150	Canola	cytosol	25.08	16.98
CDY69326	Canola	cytosol	25.08	16.98
CDY11594	Canola	cytosol	23.55	13.77
CDX85586	Canola	cytosol	25.99	13.06
CDX91026	Canola	cytosol	25.99	13.06
CDY57851	Canola	cytosol	23.55	12.92
CDX69563	Canola	cytosol	26.3	12.78
CDX95954	Canola	cytosol	30.28	12.77
CDY09880	Canola	cytosol	26.3	12.76
CDY54149	Canola	cytosol	30.58	12.64
CDY09438	Canola	cytosol	23.24	12.62
CDY03750	Canola	cytosol	22.94	12.44
CDY25260	Canola	cytosol	25.08	12.42
CDX94250	Canola	cytosol	25.08	12.35
CDY50304	Canola	cytosol	30.58	12.35
CDY53517	Canola	mitochondrion	25.08	12.06
CDX86848	Canola	mitochondrion	24.77	12.02
CDY45937	Canola	cytosol	25.08	11.99
CDX97641	Canola	cytosol	24.46	11.83
CDX98536	Canola	cytosol	24.46	11.83
CDX88555	Canola	cytosol	25.08	11.83
CDX67984	Canola	cytosol	24.46	11.75
CDX87368	Canola	cytosol	25.08	11.63
CDX79332	Canola	cytosol	24.46	11.43
CDX73633	Canola	cytosol	7.65	11.36
CDY03490	Canola	mitochondrion	24.46	11.25
CDX76327	Canola	mitochondrion	24.46	11.14
CDY25875	Canola	plastid	25.08	10.51
CDY25732	Canola	plastid	10.09	6.02
CDY70962	Canola	cytosol	4.59	4.11
CDY03491	Canola	plastid	0.0	0.0
CDY40902	Canola	nucleus	0.0	0.0
CDX76326	Canola	plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.1	Gene3D:3.30.200.20	GO:A0A078GQW4	UniProt:A0A078GQW4	EnsemblPlants:CDY27532
ProteinID:CDY27532	ProteinID:CDY27532.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00038213001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF319	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE1872	SEG:seg	:	:

Description

BnaC01g32150DBnaC01g32150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GQW4]

Coordinates

chrLK032206:-:33046..34029

Molecular Weight (calculated)

36216.5 Da

IEP (calculated)

8.047

GRAVY (calculated)

-0.280

Length

327 amino acids

Sequence
(BLAST)

001: MKPIQPPPSP MKNRFRKRPD LSLPLPNRDV ALAVPLPLPP PPSTTSAPAS GSAISAAKSL SELERVNRIG SGAGGTVYKV IHHPTSKPFA LKVIYGNHED
101: NVRRQICREI EILRSVDHAN VVKCHDMFDH NGEIQVLLEF MDGGCLEGVH VSREEELSDM SRQILSGLAY LHRHHIVHRD IKPSNLLIDS EKNVKIADFG
201: VSRILAQTMD PCNSSVGTIA YMSPERINTD LNHGRYNGYA GDVWSLGVSI LEFYLGRFPF AVSRQGDWAS LMCAICMSQP PEAPATASEE FRHFVSCCLQ
301: SDPPKRWSAQ QLLQHPFILK STRAPAS

Best Arabidopsis Sequence Match ( AT3G21220.2 )
(BLAST)

001: MKPIQSPSGV ASPMKNRLRK RPDLSLPLPH RDVALAVPLP LPPPSSSSSA PASSSAISTN ISAAKSLSEL ERVNRIGSGA GGTVYKVIHT PTSRPFALKV
101: IYGNHEDTVR RQICREIEIL RSVDHPNVVK CHDMFDHNGE IQVLLEFMDQ GSLEGAHIWQ EQELADLSRQ ILSGLAYLHR RHIVHRDIKP SNLLINSAKN
201: VKIADFGVSR ILAQTMDPCN SSVGTIAYMS PERINTDLNH GRYDGYAGDV WSLGVSILEF YLGRFPFAVS RQGDWASLMC AICMSQPPEA PATASQEFRH
301: FVSCCLQSDP PKRWSAQQLL QHPFILKATG GPNLRQMLPP PRPLPSAS

Arabidopsis Description

MKK5MKK5 [Source:UniProtKB/TrEMBL;Acc:A0A178VIK5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.