Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 4
- golgi 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY64969 | Canola | cytosol | 82.44 | 87.39 |
| CDY32868 | Canola | cytosol | 59.49 | 82.03 |
| Bra002806.1-P | Field mustard | cytosol | 82.15 | 81.46 |
| AT5G56580.1 | Thale cress | cytosol | 80.74 | 80.06 |
| CDY11913 | Canola | cytosol | 79.6 | 78.49 |
| CDX88578 | Canola | cytosol | 79.6 | 78.49 |
| KRH72031 | Soybean | cytosol | 72.8 | 72.6 |
| Solyc03g119490.2.1 | Tomato | cytosol, extracellular | 72.52 | 72.32 |
| PGSC0003DMT400014637 | Potato | cytosol | 72.52 | 72.32 |
| KRH33212 | Soybean | cytosol | 72.8 | 72.19 |
| VIT_11s0016g02970.t01 | Wine grape | cytosol | 71.1 | 70.9 |
| GSMUA_Achr9P00100_001 | Banana | extracellular, vacuole | 59.49 | 67.52 |
| TraesCS4B01G315300.1 | Wheat | cytosol | 62.32 | 61.97 |
| TraesCS4D01G312300.3 | Wheat | cytosol | 62.04 | 61.69 |
| TraesCS4A01G414600.1 | Wheat | cytosol | 62.04 | 61.69 |
| Zm00001d043609_P001 | Maize | cytosol, extracellular | 61.76 | 61.41 |
| EES03540 | Sorghum | cytosol | 61.47 | 61.13 |
| Os01t0510100-01 | Rice | cytosol, plasma membrane | 61.19 | 60.85 |
| CDX68588 | Canola | cytosol | 51.84 | 50.27 |
| CDY43527 | Canola | cytosol | 50.99 | 49.45 |
| CDX92751 | Canola | cytosol | 47.88 | 47.88 |
| CDY42757 | Canola | cytosol | 47.88 | 47.61 |
| CDX87830 | Canola | cytosol | 23.8 | 39.07 |
| CDX82210 | Canola | plastid | 31.73 | 36.6 |
| CDY11103 | Canola | mitochondrion | 31.44 | 36.16 |
| CDY71921 | Canola | mitochondrion | 31.16 | 35.95 |
| CDX82067 | Canola | mitochondrion | 31.16 | 35.95 |
| CDY32415 | Canola | cytosol, plastid | 24.08 | 35.56 |
| CDX68224 | Canola | mitochondrion | 30.88 | 35.39 |
| CDX82209 | Canola | plastid | 32.58 | 34.85 |
| CDY27532 | Canola | cytosol, plastid | 32.01 | 34.56 |
| CDY37306 | Canola | cytosol, plastid | 31.73 | 33.84 |
| CDY43920 | Canola | cytosol, plastid | 31.73 | 33.23 |
| CDY24712 | Canola | mitochondrion | 29.46 | 32.81 |
| CDY05240 | Canola | mitochondrion | 29.18 | 32.49 |
| CDY52951 | Canola | cytosol | 32.29 | 32.02 |
| CDY46547 | Canola | cytosol, plastid | 32.01 | 31.83 |
| CDY32414 | Canola | extracellular, plasma membrane | 32.29 | 31.49 |
| CDX93844 | Canola | cytosol | 21.53 | 31.15 |
| CDX78589 | Canola | mitochondrion | 17.85 | 27.88 |
| CDY70105 | Canola | cytosol | 22.95 | 26.47 |
| CDY01289 | Canola | cytosol | 13.03 | 26.14 |
| CDX70576 | Canola | cytosol | 13.88 | 25.93 |
| CDY42585 | Canola | cytosol | 34.56 | 23.55 |
| CDY50119 | Canola | cytosol | 34.28 | 23.36 |
| CDY40903 | Canola | cytosol | 26.35 | 17.16 |
| CDY62124 | Canola | cytosol | 22.38 | 16.39 |
| CDY47150 | Canola | cytosol | 22.38 | 16.36 |
| CDY69326 | Canola | cytosol | 22.38 | 16.36 |
| CDY11594 | Canola | cytosol | 23.8 | 15.03 |
| CDY57851 | Canola | cytosol | 23.8 | 14.09 |
| CDY09438 | Canola | cytosol | 23.51 | 13.79 |
| CDY03750 | Canola | cytosol | 23.51 | 13.76 |
| CDX91026 | Canola | cytosol | 22.95 | 12.44 |
| CDX85586 | Canola | cytosol | 22.95 | 12.44 |
| CDX97641 | Canola | cytosol | 23.8 | 12.43 |
| CDX98536 | Canola | cytosol | 23.8 | 12.43 |
| CDY53517 | Canola | mitochondrion | 23.8 | 12.35 |
| CDX86848 | Canola | mitochondrion | 23.51 | 12.31 |
| CDX69563 | Canola | cytosol | 23.23 | 12.18 |
| CDY09880 | Canola | cytosol | 23.23 | 12.17 |
| CDY45937 | Canola | cytosol | 23.51 | 12.13 |
| CDY25260 | Canola | cytosol | 22.66 | 12.12 |
| CDX94250 | Canola | cytosol | 22.66 | 12.05 |
| CDX95954 | Canola | cytosol | 26.35 | 12.0 |
| CDY54149 | Canola | cytosol | 26.35 | 11.76 |
| CDX88555 | Canola | cytosol | 22.38 | 11.4 |
| CDY50304 | Canola | cytosol | 26.06 | 11.36 |
| CDX67984 | Canola | cytosol | 21.81 | 11.31 |
| CDX87368 | Canola | cytosol | 22.38 | 11.21 |
| CDX79332 | Canola | cytosol | 21.81 | 11.0 |
| CDY03490 | Canola | mitochondrion | 22.1 | 10.97 |
| CDX76327 | Canola | mitochondrion | 22.1 | 10.86 |
| CDY25875 | Canola | plastid | 23.8 | 10.77 |
| CDX73633 | Canola | cytosol | 4.82 | 7.73 |
| CDY25732 | Canola | plastid | 9.07 | 5.84 |
| CDY70962 | Canola | cytosol | 3.68 | 3.56 |
| CDX76326 | Canola | plastid | 0.28 | 0.32 |
| CDY03491 | Canola | plastid | 0.28 | 0.32 |
| CDY40902 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:13.4.4.1.3 | MapMan:18.4.2.1 | Gene3D:3.30.200.20 | GO:A0A078HR97 | UniProt:A0A078HR97 |
| EnsemblPlants:CDY39283 | ProteinID:CDY39283 | ProteinID:CDY39283.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016301 |
| GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00067518001 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 |
| PIRSF:PIRSF000654 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24361 | PANTHER:PTHR24361:SF616 | InterPro:Prot_kinase_dom |
| SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | TMHMM:TMhelix | UniParc:UPI0004EEAC95 | : |
Description
BnaC06g27080DBnaC06g27080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HR97]
Coordinates
chrLK032444:+:222275..224168
Molecular Weight (calculated)
39721.7 Da
IEP (calculated)
6.281
GRAVY (calculated)
-0.038
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKLNRLQCD QLVNLSQFSL FLIAHILLTA SGTFHDGDFL LNQKGLKLTP INVLEKNQFL PSDCKELDFE ITAEDLETMR VIGKGSSGVV QLVRHKWVGN
101: VHFYELQVIQ MNIQEKIRKQ IVQELKINQA SSQCPHVVVC YHSFYHNGAF SLVLEYMDRG SLVDVIRQVK TILEPYLSVV CKQVLQGLVY LHNERHVIHR
201: DIKPSNLLVN HKGEVKISDF GVSASLASSM GQRDTFVGTY NYMSPERISG STYDYSSDIW SLGMSVLECA IGRFPYLESE DQQNPPSFYE LLAAIVESPP
301: PTAPSDQFSP EFCSFITACL QKDPPARASS LDLLVSNAYS RVTTLFFSLG NNI
101: VHFYELQVIQ MNIQEKIRKQ IVQELKINQA SSQCPHVVVC YHSFYHNGAF SLVLEYMDRG SLVDVIRQVK TILEPYLSVV CKQVLQGLVY LHNERHVIHR
201: DIKPSNLLVN HKGEVKISDF GVSASLASSM GQRDTFVGTY NYMSPERISG STYDYSSDIW SLGMSVLECA IGRFPYLESE DQQNPPSFYE LLAAIVESPP
301: PTAPSDQFSP EFCSFITACL QKDPPARASS LDLLVSNAYS RVTTLFFSLG NNI
001: MVKIKSNLKQ LKLSVPAQES PISSFLTASG TFHDGDFLLN QKGLRLTSDE KQSRQSDSKE LDFEITAEDL ETVKVIGKGS GGVVQLVRHK WVGKFFAMKV
101: IQMNIQEEIR KQIVQELKIN QASSQCPHVV VCYHSFYHNG AFSLVLEYMD RGSLADVIRQ VKTILEPYLA VVCKQVLLGL VYLHNERHVI HRDIKPSNLL
201: VNHKGEVKIS DFGVSASLAS SMGQRDTFVG TYNYMSPERI SGSTYDYSSD IWSLGMSVLE CAIGRFPYLE SEDQQNPPSF YELLAAIVEN PPPTAPSDQF
301: SPEFCSFVSA CIQKDPPARA SSLDLLSHPF IKKFEDKDID LGILVGTLEP PVNYLR
101: IQMNIQEEIR KQIVQELKIN QASSQCPHVV VCYHSFYHNG AFSLVLEYMD RGSLADVIRQ VKTILEPYLA VVCKQVLLGL VYLHNERHVI HRDIKPSNLL
201: VNHKGEVKIS DFGVSASLAS SMGQRDTFVG TYNYMSPERI SGSTYDYSSD IWSLGMSVLE CAIGRFPYLE SEDQQNPPSF YELLAAIVEN PPPTAPSDQF
301: SPEFCSFVSA CIQKDPPARA SSLDLLSHPF IKKFEDKDID LGILVGTLEP PVNYLR
Arabidopsis Description
MKK6Mitogen-activated protein kinase kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.