Factsheet for Bra002806.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra000326.1-P
Bra000955.1-P
Bra004784.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G56580.1	Bra000214.1-P	AT2G41100.1	17360592
AT5G56580.1	Bra000326.1-P	AT2G43790.1	19513235
AT5G56580.1	Bra004784.1-P	AT2G43790.1	19513235
AT5G56580.1	Bra000955.1-P	AT4G01370.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64969	Canola	cytosol	91.29	97.6
AT5G56580.1	Thale cress	cytosol	95.51	95.51
CDY32868	Canola	cytosol	66.85	92.97
Bra006866.1-P	Field mustard	cytosol	89.04	91.09
KRH72031	Soybean	cytosol	84.83	85.31
KRH33212	Soybean	cytosol	85.11	85.11
PGSC0003DMT400014637	Potato	cytosol	83.99	84.46
Solyc03g119490.2.1	Tomato	cytosol, extracellular	83.71	84.18
VIT_11s0016g02970.t01	Wine grape	cytosol	83.15	83.62
CDY39283	Canola	plasma membrane, vacuole	81.46	82.15
GSMUA_Achr9P00100_001	Banana	extracellular, vacuole	66.01	75.56
Zm00001d043609_P001	Maize	cytosol, extracellular	70.51	70.7
Os01t0510100-01	Rice	cytosol, plasma membrane	70.22	70.42
EES03540	Sorghum	cytosol	69.94	70.14
TraesCS4B01G315300.1	Wheat	cytosol	69.94	70.14
TraesCS4A01G414600.1	Wheat	cytosol	69.66	69.86
TraesCS4D01G312300.3	Wheat	cytosol	69.66	69.86
Bra011137.1-P	Field mustard	cytosol	54.78	53.57
Bra019122.1-P	Field mustard	cytosol	51.69	51.83
Bra003842.1-P	Field mustard	mitochondrion	33.71	38.96
Bra008099.1-P	Field mustard	mitochondrion	33.43	38.89
Bra001818.1-P	Field mustard	plastid	35.96	38.79
Bra023894.1-P	Field mustard	cytosol, plastid	34.55	37.16
Bra020769.1-P	Field mustard	plastid	31.46	36.36
Bra030430.1-P	Field mustard	cytosol, plastid	34.27	36.2
Bra014295.1-P	Field mustard	cytosol, plastid	34.55	34.65
Bra023257.1-P	Field mustard	cytosol, mitochondrion, nucleus, plasma membrane, plastid	28.37	32.79
Bra001817.1-P	Field mustard	cytosol	34.27	32.19
Bra006265.1-P	Field mustard	cytosol	16.29	30.21
Bra025576.1-P	Field mustard	cytosol	39.04	26.83
Bra039858.1-P	Field mustard	cytosol	23.88	17.6
Bra016220.1-P	Field mustard	cytosol	27.53	16.55
Bra007914.1-P	Field mustard	cytosol	27.53	16.07
Bra035282.1-P	Field mustard	cytosol	25.28	15.2
Bra008742.1-P	Field mustard	cytosol	26.69	15.15
Bra035132.1-P	Field mustard	cytosol	25.0	14.98
Bra023483.1-P	Field mustard	cytosol	26.4	14.92
Bra027269.1-P	Field mustard	cytosol	27.25	14.29
Bra033169.1-P	Field mustard	cytosol	25.0	13.51
Bra003600.1-P	Field mustard	cytosol	23.6	13.21
Bra013762.1-P	Field mustard	mitochondrion	23.88	12.46
Bra004366.1-P	Field mustard	cytosol	29.21	12.09
Bra038106.1-P	Field mustard	plastid	26.4	11.3

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.4.4.1.3	MapMan:18.4.2.1	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra002806	EnsemblPlants:Bra002806.1
EnsemblPlants:Bra002806.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M4CF24	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24361	PANTHER:PTHR24361:SF616	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002544A2A	SEG:seg	:	:	:

Description

AT5G56580 (E=4e-191) ATMKK6, ANQ1, MKK6 | MKK6 (MAP KINASE KINASE 6); MAP kinase kinase/ kinase

Coordinates

chrA10:-:7477487..7479381

Molecular Weight (calculated)

39746.7 Da

IEP (calculated)

6.348

GRAVY (calculated)

-0.169

Length

356 amino acids

Sequence
(BLAST)

001: MKLKSNLKQL NKLSVPAQQT PISSFLTASG TFHDGDFLLN QKGLKLTSDD KQSRPSDSKE LDFEITAEDL ETVRVIGKGS GGVVQLVRHK WVGKLFAMKV
101: IQMNIQEEIR KQIVQELKIN QASSQCPHVV VCYHSFYHNG AFSLVLEYMD RGSLVDVIRQ VKTILEPYLA VVCKQVLQGL VYLHNERHVI HRDIKPSNLL
201: VNHKGEVKIS DFGVSASLAS SMGQRDTFVG TYNYMSPERI SGSTYDYSSD IWSLGMSVLE CAIGRFPYLE SEDQQNPPSF YELLAAIVES PPPTAPSDQF
301: SPEFCSFVSA CLQKDPPARA SSLDLLSHPF IKKFEDMDID LGILVGTLEP PVNCLR

Best Arabidopsis Sequence Match ( AT5G56580.1 )
(BLAST)

001: MVKIKSNLKQ LKLSVPAQES PISSFLTASG TFHDGDFLLN QKGLRLTSDE KQSRQSDSKE LDFEITAEDL ETVKVIGKGS GGVVQLVRHK WVGKFFAMKV
101: IQMNIQEEIR KQIVQELKIN QASSQCPHVV VCYHSFYHNG AFSLVLEYMD RGSLADVIRQ VKTILEPYLA VVCKQVLLGL VYLHNERHVI HRDIKPSNLL
201: VNHKGEVKIS DFGVSASLAS SMGQRDTFVG TYNYMSPERI SGSTYDYSSD IWSLGMSVLE CAIGRFPYLE SEDQQNPPSF YELLAAIVEN PPPTAPSDQF
301: SPEFCSFVSA CIQKDPPARA SSLDLLSHPF IKKFEDKDID LGILVGTLEP PVNYLR

Arabidopsis Description

MKK6Mitogen-activated protein kinase kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.