Factsheet for PGSC0003DMT400014637

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400014123
PGSC0003DMT400018569
PGSC0003DMT400046278
PGSC0003DMT400054299
PGSC0003DMT400055751
PGSC0003DMT400058435
PGSC0003DMT400070437
PGSC0003DMT400097662

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G56580.1	PGSC0003DMT400014123	AT2G41100.1	17360592
AT5G56580.1	PGSC0003DMT400018569	AT2G41100.1	17360592
AT5G56580.1	PGSC0003DMT400046278	AT2G41100.1	17360592
AT5G56580.1	PGSC0003DMT400054299	AT2G41100.1	17360592
AT5G56580.1	PGSC0003DMT400058435	AT2G41100.1	17360592
AT5G56580.1	PGSC0003DMT400070437	AT2G41100.1	17360592
AT5G56580.1	PGSC0003DMT400097662	AT2G41100.1	17360592
AT5G56580.1	PGSC0003DMT400055751	AT4G01370.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g119490.2.1	Tomato	cytosol, extracellular	99.15	99.15
VIT_11s0016g02970.t01	Wine grape	cytosol	89.27	89.27
KRH72031	Soybean	cytosol	88.98	88.98
KRH33212	Soybean	cytosol	88.7	88.2
Bra002806.1-P	Field mustard	cytosol	84.46	83.99
CDY11913	Canola	cytosol	84.75	83.8
CDX88578	Canola	cytosol	84.46	83.52
AT5G56580.1	Thale cress	cytosol	83.9	83.43
CDY64969	Canola	cytosol	77.4	82.28
CDY32868	Canola	cytosol	59.32	82.03
Bra006866.1-P	Field mustard	cytosol	78.81	80.17
GSMUA_Achr9P00100_001	Banana	extracellular, vacuole	70.06	79.74
Zm00001d043609_P001	Maize	cytosol, extracellular	77.97	77.75
Os01t0510100-01	Rice	cytosol, plasma membrane	77.68	77.46
EES03540	Sorghum	cytosol	77.68	77.46
TraesCS4B01G315300.1	Wheat	cytosol	77.4	77.18
TraesCS4A01G414600.1	Wheat	cytosol	77.12	76.9
TraesCS4D01G312300.3	Wheat	cytosol	77.12	76.9
CDY39283	Canola	plasma membrane, vacuole	72.32	72.52
PGSC0003DMT400000744	Potato	cytosol	61.58	61.06
PGSC0003DMT400083995	Potato	cytosol	33.62	35.74
PGSC0003DMT400023739	Potato	plastid	36.44	34.86
PGSC0003DMT400039329	Potato	cytosol	38.7	26.6
PGSC0003DMT400074400	Potato	cytosol	26.27	24.93
PGSC0003DMT400042095	Potato	cytosol	24.86	16.83
PGSC0003DMT400036874	Potato	cytosol	26.27	13.86
PGSC0003DMT400031593	Potato	nucleus	4.8	3.6

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.4.4.1.3	MapMan:18.4.2.1	Gene3D:3.30.200.20	GO:GO:0000003	GO:GO:0000165
GO:GO:0000166	GO:GO:0000187	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0004708	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007049	GO:GO:0007112
GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009524
GO:GO:0009653	GO:GO:0009791	GO:GO:0009987	GO:GO:0010311	GO:GO:0016043	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1A4L8
PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG403005720	PGSC:PGSC0003DMG403005720	EnsemblPlants:PGSC0003DMT400014637	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF616	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002948891	SEG:seg	:

Description

MAPKK [Source:PGSC_GENE;Acc:PGSC0003DMG403005720]

Coordinates

chr3:+:58899192..58902545

Molecular Weight (calculated)

39635.8 Da

IEP (calculated)

6.287

GRAVY (calculated)

-0.103

Length

354 amino acids

Sequence
(BLAST)

001: MKTAKPLKQL KLSVPAQDTP ISSFLTASGT FHDGDLLLNQ KGLRLISEEN ESLPSETKEI DLQFSLEDLE TIKVIGKGSG GVVQLVRHKW VGTLFALKVI
101: QMNIQEDIRK QIVQELKINQ ASQCPHVVVC YHSFYHNGAI SLVLEYMDRG SLVDVIGQLK TILEPYLAVV CKQVLQGLVY LHHERHVIHR DIKPSNLLVN
201: HKGEVKITDF GVSAMLASSM GQRDTFVGTY NYMAPERISG STYDYKSDIW SLGMVILECA IGRFPYIQSE DQQARPSFYE LLEAIVSSPP PSAPADQFSP
301: EFCSFVSACI QKDPRDRSSA LDLLSHPFIK KFEDKDIDLS ILVSSLEPPV NFPR

Best Arabidopsis Sequence Match ( AT5G56580.1 )
(BLAST)

001: MVKIKSNLKQ LKLSVPAQES PISSFLTASG TFHDGDFLLN QKGLRLTSDE KQSRQSDSKE LDFEITAEDL ETVKVIGKGS GGVVQLVRHK WVGKFFAMKV
101: IQMNIQEEIR KQIVQELKIN QASSQCPHVV VCYHSFYHNG AFSLVLEYMD RGSLADVIRQ VKTILEPYLA VVCKQVLLGL VYLHNERHVI HRDIKPSNLL
201: VNHKGEVKIS DFGVSASLAS SMGQRDTFVG TYNYMSPERI SGSTYDYSSD IWSLGMSVLE CAIGRFPYLE SEDQQNPPSF YELLAAIVEN PPPTAPSDQF
301: SPEFCSFVSA CIQKDPPARA SSLDLLSHPF IKKFEDKDID LGILVGTLEP PVNYLR

Arabidopsis Description

MKK6Mitogen-activated protein kinase kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.