Factsheet for PGSC0003DMT400074400

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G353400.1	Wheat	cytosol	64.34	68.97
GSMUA_Achr3P04830_001	Banana	cytosol	63.81	55.61
Solyc06g068590.2.1	Tomato	cytosol	92.23	52.68
VIT_09s0018g01390.t01	Wine grape	cytosol	74.53	47.36
Bra035132.1-P	Field mustard	cytosol	71.58	44.95
GSMUA_Achr9P13450_001	Banana	cytosol	65.95	42.93
PGSC0003DMT400036874	Potato	cytosol	76.94	42.77
KRH44651	Soybean	cytosol	73.46	39.26
CDX67984	Canola	cytosol	71.58	39.21
AT1G79640.1	Thale cress	cytosol	71.31	38.89
CDX88555	Canola	cytosol	71.85	38.67
KRH47003	Soybean	cytosol	71.85	38.62
Bra003600.1-P	Field mustard	cytosol	65.15	38.21
CDX79332	Canola	cytosol	71.58	38.14
CDX87368	Canola	cytosol	71.85	38.01
Os02t0791700-00	Rice	plasma membrane	67.56	37.28
Zm00001d018352_P001	Maize	cytosol	65.68	36.4
EES05936	Sorghum	cytosol	66.22	35.9
Zm00001d052051_P001	Maize	cytosol	66.22	35.8
TraesCS6B01G386100.1	Wheat	cytosol	66.22	35.54
TraesCS6D01G335800.1	Wheat	cytosol	65.95	35.4
HORVU6Hr1G084460.12	Barley	cytosol	65.68	35.15
TraesCS6A01G353500.1	Wheat	peroxisome	62.47	34.67
GSMUA_Achr10P...	Banana	cytosol	68.1	32.07
PGSC0003DMT400042095	Potato	cytosol	43.7	31.17
PGSC0003DMT400014637	Potato	cytosol	24.93	26.27
PGSC0003DMT400000744	Potato	cytosol	24.66	25.77
PGSC0003DMT400083995	Potato	cytosol	22.79	25.53
PGSC0003DMT400023739	Potato	plastid	22.79	22.97
PGSC0003DMT400039329	Potato	cytosol	22.25	16.12
PGSC0003DMT400031593	Potato	nucleus	10.46	8.26

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.3	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1CTM8	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400028914	PGSC:PGSC0003DMG400028914
EnsemblPlants:PGSC0003DMT400074400	PIRSF:PIRSF000654	PRINTS:PR00109	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24361	PANTHER:PTHR24361:SF488	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00029564B0	:	:	:

Description

Serine/threonine protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400028914]

Coordinates

chr6:+:50272360..50279436

Molecular Weight (calculated)

42861.1 Da

IEP (calculated)

8.590

GRAVY (calculated)

-0.410

Length

373 amino acids

Sequence
(BLAST)

001: MEKKTNLPKK PIEKRTQYPI GSEQYTVYEE IGKGVSALVH RALCIPLNEI VAIKILDFER DKCDLNSVSR EAQIMVLVDH PNVLKSYCSF VCDYNLWVVM
101: PYMAQGSCLH ILKSAYPDGV GEVVIATVLR EVLKGLEYLH DHGYIHRDVK AGNILIDSRG GIKLGDFGVS AYMFDSGDRQ HMRNTFAGTP CWMAPEVMEQ
201: VHGYDFKADI WSFGITALEL AHGHAPFSKY PPMKVLLMTL KNEPPRLDSE RDRKFSKSFR QMIASCLVKD PSKRPSAKKL LKHPFFKKAR SNDYVARTLL
301: EGLPSLGDRM QELKRKEEEM LAQKKMPDGQ KEEMSQLEAA LDREKDLHRE VADLRWRYYD YTLILPVNFG YYK

Best Arabidopsis Sequence Match ( AT1G79640.5 )
(BLAST)

001: MGTMEKKKYP IGPEHYTLYE FIGQGVSALV HRALCIPFDE VVAIKILDFE RDNCDLNNIS REAQTMMLVD HPNVLKSHCS FVSDHNLWVI MPYMSGGSCL
101: HILKAAYPDG FEEAIIATIL REALKGLDYL HQHGHIHRDV KAGNILLGAR GAVKLGDFGV SACLFDSGDR QRTRNTFVGT PCWMAPEVME QLHGYDFKAD
201: IWSFGITGLE LAHGHAPFSK YPPMKVLLMT LQNAPPGLDY ERDKKFSRSF KQMIASCLVK DPSKRPSAKK LLKHSFFKQA RSSDYIARKL LDGLPDLVNR
301: VQAIKRKEED MLAQEKMADG EKEELSQNEY KRGISGWNFN LDDMKAQASL IQDMDCGFSD SLSGSATSLQ ALDSQDTQSE IQEDTGQITN KYLQPLIHRS
401: LSIARDKSDD DSSLASPSYD SYVYSSPRHE DLSLNNTHVG STHANNGKPT DATSIPTNQP TEIIAGSSVL ADGNGAPNKG ESDKTQEQLQ NGSNCNGTHP
501: TVGGDDVPTE MAVKPPKAAS SLDESDDKSK PPVVQQRGRF KVTSENLDIE KVVAPSPILQ KSHSMQVLCQ HSSASLPHSD VTLPNLTSSY VYPLVYPVLQ
601: TNILERDNIL HMMKVLTNRE LTDGRAVEQG SIQQPTVPPT EKSMLEAAHE REKELLHDIT DLQWRLICAE EELQKYKTEH AQV

Arabidopsis Description

Protein kinase superfamily protein [Source:TAIR;Acc:AT1G79640]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.