CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67984	Canola	cytosol	94.86	97.5
Bra003600.1-P	Field mustard	cytosol	86.14	94.81
CDX88555	Canola	cytosol	89.29	90.19
AT1G79640.1	Thale cress	cytosol	87.71	89.77
CDX87368	Canola	cytosol	89.71	89.08
TraesCS6A01G353400.1	Wheat	cytosol	35.86	72.13
PGSC0003DMT400074400	Potato	cytosol	38.14	71.58
CDY70105	Canola	cytosol	30.57	69.93
VIT_09s0018g01390.t01	Wine grape	cytosol	56.86	67.8
CDX70576	Canola	cytosol	18.14	67.2
CDX78589	Canola	mitochondrion	21.57	66.81
KRH44651	Soybean	cytosol	63.0	63.18
GSMUA_Achr3P04830_001	Banana	cytosol	38.43	62.85
KRH47003	Soybean	cytosol	61.29	61.82
PGSC0003DMT400036874	Potato	cytosol	58.14	60.66
Solyc03g117790.1.1	Tomato	cytosol	58.86	59.03
GSMUA_Achr9P13450_001	Banana	cytosol	46.43	56.72
Solyc06g068590.2.1	Tomato	cytosol	49.14	52.68
Os02t0791700-00	Rice	plasma membrane	50.57	52.37
TraesCS6B01G386100.1	Wheat	cytosol	51.71	52.09
TraesCS6D01G335800.1	Wheat	cytosol	51.57	51.94
Zm00001d018352_P001	Maize	cytosol	49.71	51.71
HORVU6Hr1G084460.12	Barley	cytosol	51.43	51.65
EES05936	Sorghum	cytosol	50.71	51.6
Zm00001d052051_P001	Maize	cytosol	50.71	51.45
TraesCS6A01G353500.1	Wheat	peroxisome	47.71	49.7
GSMUA_Achr10P...	Banana	cytosol	54.14	47.85
CDY11594	Canola	cytosol	35.71	44.72
CDX85586	Canola	cytosol	40.57	43.63
CDX91026	Canola	cytosol	40.43	43.47
CDY57851	Canola	cytosol	36.29	42.62
CDX69563	Canola	cytosol	40.86	42.5
CDY09880	Canola	cytosol	40.71	42.28
CDY25260	Canola	cytosol	39.57	41.97
CDX94250	Canola	cytosol	39.71	41.87
CDY03750	Canola	cytosol	36.0	41.79
CDY09438	Canola	cytosol	35.71	41.53
CDX86848	Canola	mitochondrion	39.43	40.95
CDY53517	Canola	mitochondrion	38.71	39.85
CDY03490	Canola	mitochondrion	37.86	37.27
CDX76327	Canola	mitochondrion	38.0	37.05
CDY47150	Canola	cytosol	23.57	34.16
CDY69326	Canola	cytosol	23.57	34.16
CDY62124	Canola	cytosol	23.43	34.02
CDX87830	Canola	cytosol	9.14	29.77
CDY32868	Canola	cytosol	10.0	27.34
CDX92751	Canola	cytosol	13.71	27.2
CDX82210	Canola	plastid	11.86	27.12
CDX82067	Canola	mitochondrion	11.71	26.8
CDY42757	Canola	cytosol	13.57	26.76
CDY05240	Canola	mitochondrion	12.0	26.5
CDY71921	Canola	mitochondrion	11.57	26.47
CDY11103	Canola	mitochondrion	11.57	26.38
CDX68224	Canola	mitochondrion	11.57	26.3
CDY24712	Canola	mitochondrion	11.71	25.87
CDX68588	Canola	cytosol	13.29	25.55
CDX82209	Canola	plastid	12.0	25.45
CDY64969	Canola	cytosol	12.0	25.23
CDX88578	Canola	cytosol	12.71	24.86
CDY11913	Canola	cytosol	12.71	24.86
CDY43527	Canola	cytosol	12.86	24.73
CDY43920	Canola	cytosol, plastid	11.86	24.63
CDY27532	Canola	cytosol, plastid	11.43	24.46
CDY37306	Canola	cytosol, plastid	11.29	23.87
CDY32415	Canola	cytosol, plastid	8.0	23.43
CDY32414	Canola	extracellular, plasma membrane	12.0	23.2
CDY52951	Canola	cytosol	11.71	23.03
CDY46547	Canola	cytosol, plastid	11.57	22.82
CDY39283	Canola	plasma membrane, vacuole	11.0	21.81
CDX93844	Canola	cytosol	7.43	21.31
CDX98536	Canola	cytosol	20.43	21.15
CDX97641	Canola	cytosol	20.43	21.15
CDY45937	Canola	cytosol	20.29	20.76
CDY40903	Canola	cytosol	16.0	20.66
CDY01289	Canola	cytosol	4.86	19.32
CDY50119	Canola	cytosol	14.29	19.3
CDY42585	Canola	cytosol	14.29	19.3
CDY25875	Canola	plastid	20.43	18.33
CDX73633	Canola	cytosol	5.71	18.18
CDX95954	Canola	cytosol	18.57	16.77
CDY54149	Canola	cytosol	18.14	16.06
CDY50304	Canola	cytosol	18.14	15.68
CDY25732	Canola	plastid	10.0	12.77
CDY70962	Canola	cytosol	6.14	11.78
CDY40902	Canola	nucleus	2.86	8.1
CDX76326	Canola	plastid	0.0	0.0
CDY03491	Canola	plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.3	Gene3D:3.30.200.20	GO:A0A078CRH5	EnsemblPlants:CDX79332	ProteinID:CDX79332
ProteinID:CDX79332.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00132010001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF488
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	UniParc:UPI0004EE900D	SEG:seg

Description

BnaC06g19710D

Coordinates

chrLK031817:-:1410928..1415103

Molecular Weight (calculated)

77996.7 Da

IEP (calculated)

6.100

GRAVY (calculated)

-0.416

Length

700 amino acids

Sequence
(BLAST)

001: MEKKKYPIGP EHYTIYEVIG QGVSALVHRA LCIPFDEVVA IKILDFERDN CDLNNISREA QTMMLVDHLN LLKSHCSFVS DHNLWVVMPY MSGGSCLHIL
101: KAAYPDGFEE VIIATILREA LKGLDYLHQH GHIHRDVKAG NILLGARGAI KLGDFGVSAC LFDSGDRQRT RNTFVGTPCW MAPEVMEQLH GYDFKADIWS
201: FGITGLELAH GHAPFSKYPP MKVLLMTLQN APPGLDYERD RKFSRSFKQM IASCLVKDPS KRPSAKKLLK HSFFKQARSS DYIARKLLDG LPDLVNRVQA
301: IKKKEEDMLA QEKMADGEKE ELSQNEYKRG ISGWNFNLDD MKAQASLIQD IDCGLSESSL SESTTSLQAL DSQDMQLETQ EDTCQLPNKY LQPLIHRTLS
401: IARDKSDDDI SLASPSYDNY VYSSPRHEDL SLNNTTVASA HAINEKSTDS TSITANQPTE ILAGSCVSKG ESDKTQDQLQ NGSTCNGAHP TVGGDEVPTE
501: LAVKPPRALS ASLDESDDKS KPPVVQQRGR FKVTSENLDI DKVVPSPILQ KSHSMQVLGH HSAASLPPSV SGADVPLPNL TSSYVYPLVY PVLQTNILER
601: DNILHMMKVL TNRELTEGRS AEPGSVQQPN VAPTEKSMLE AAHEREKDLL HDITDLQWRL ICAEEELQKY KTEHAHVSLS ISKYNHPVCN LFNFNYVVSL

Best Arabidopsis Sequence Match ( AT1G79640.1 )
(BLAST)

001: MEKKKYPIGP EHYTLYEFIG QGVSALVHRA LCIPFDEVVA IKILDFERDN CDLNNISREA QTMMLVDHPN VLKSHCSFVS DHNLWVIMPY MSGGSCLHIL
101: KAAYPDGFEE AIIATILREA LKGLDYLHQH GHIHRDVKAG NILLGARGAV KLGDFGVSAC LFDSGDRQRT RNTFVGTPCW MAPEVMEQLH GYDFKADIWS
201: FGITGLELAH GHAPFSKYPP MKVLLMTLQN APPGLDYERD KKFSRSFKQM IASCLVKDPS KRPSAKKLLK HSFFKQARSS DYIARKLLDG LPDLVNRVQA
301: IKRKEEDMLA QEKMADGEKE ELSQNEYKRG ISGWNFNLDD MKAQASLIQD MDCGFSDSLS GSATSLQALD SQDTQSEIQE DTGQITNKYL QPLIHRSLSI
401: ARDKSDDDSS LASPSYDSYV YSSPRHEDLS LNNTHVGSTH ANNGKPTDAT SIPTNQPTEI IAGSSVLADG NGAPNKGESD KTQEQLQNGS NCNGTHPTVG
501: GDDVPTEMAV KPPKAASSLD ESDDKSKPPV VQQRGRFKVT SENLDIEKVV APSPILQKSH SMQVLCQHSS ASLPHSDVTL PNLTSSYVYP LVYPVLQTNI
601: LERDNILHMM KVLTNRELTD GRAVEQGSIQ QPTVPPTEKS MLEAAHEREK ELLHDITDLQ WRLICAEEEL QKYKTEHAQV SMSN

Arabidopsis Description

Protein kinase superfamily protein [Source:TAIR;Acc:AT1G79640]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.