CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX79801
CDX83459
CDY17911
CDY44256

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G21220.1	CDX79801	AT2G43790.1	19513235
AT3G21220.1	CDX83459	AT2G43790.1	19513235
AT3G21220.1	CDY17911	AT2G43790.1	19513235
AT3G21220.1	CDY44256	AT2G43790.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001818.1-P	Field mustard	plastid	99.16	71.82
CDX82209	Canola	plastid	98.33	71.21
CDX82210	Canola	plastid	82.85	64.71
CDY27532	Canola	cytosol, plastid	86.61	63.3
CDY37306	Canola	cytosol, plastid	87.45	63.14
AT3G21220.1	Thale cress	cytosol, plastid	90.8	62.36
CDY32414	Canola	extracellular, plasma membrane	81.17	53.59
CDY46547	Canola	cytosol, plastid	78.24	52.68
CDY52951	Canola	cytosol	77.82	52.25
CDY43920	Canola	cytosol, plastid	73.22	51.93
Solyc03g123800.1.1	Tomato	nucleus	75.73	50.42
HORVU5Hr1G067100.2	Barley	cytosol	48.54	50.0
PGSC0003DMT400023739	Potato	plastid	76.57	49.46
HORVU7Hr1G031720.2	Barley	cytosol	55.23	49.44
GSMUA_Achr4P05870_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	65.27	46.99
Os06t0191300-01	Rice	plasma membrane	66.53	46.49
KRH47006	Soybean	cytosol, plastid	67.78	46.15
KXG19514	Sorghum	plastid	66.53	45.82
Os02t0787300-01	Rice	plasma membrane	70.71	45.8
Zm00001d045064_P001	Maize	extracellular, plasma membrane	66.11	45.53
TraesCS7B01G059000.1	Wheat	plastid	65.69	45.51
Zm00001d018326_P001	Maize	plastid	67.78	45.51
CDX87830	Canola	cytosol	40.59	45.12
TraesCS7A01G154900.1	Wheat	plastid	65.69	44.99
KRH44646	Soybean	cytosol, plastid	68.2	44.78
TraesCS7D01G155100.1	Wheat	plastid	65.27	44.7
OQU85840	Sorghum	plastid	69.46	44.62
Zm00001d052066_P001	Maize	plastid	67.78	44.51
TraesCS6D01G328800.1	Wheat	cytosol, plastid	67.36	43.75
TraesCS6B01G379500.1	Wheat	cytosol, plastid	67.78	43.55
VIT_09s0018g01820.t01	Wine grape	plastid	75.31	42.86
GSMUA_Achr9P13590_001	Banana	mitochondrion	40.59	41.28
HORVU0Hr1G038850.2	Barley	cytosol	48.54	39.32
CDY71921	Canola	mitochondrion	47.28	36.93
CDX82067	Canola	mitochondrion	46.86	36.6
CDY11103	Canola	mitochondrion	46.44	36.16
CDX68224	Canola	mitochondrion	46.44	36.04
CDX93844	Canola	cytosol	36.4	35.66
GSMUA_Achr3P05000_001	Banana	plastid	66.11	34.8
CDY24712	Canola	mitochondrion	46.03	34.7
CDY05240	Canola	mitochondrion	45.61	34.38
CDY01289	Canola	cytosol	25.1	34.09
Os06t0191500-01	Rice	cytosol, plastid	38.91	30.39
CDY64969	Canola	cytosol	36.4	26.13
CDX92751	Canola	cytosol	37.66	25.5
CDY42757	Canola	cytosol	37.66	25.35
CDY11913	Canola	cytosol	37.24	24.86
CDX88578	Canola	cytosol	37.24	24.86
CDX78589	Canola	mitochondrion	23.01	24.34
GSMUA_Achr9P22810_001	Banana	cytosol	12.97	24.22
CDY39283	Canola	plasma membrane, vacuole	35.56	24.08
CDY32868	Canola	cytosol	25.52	23.83
CDX68588	Canola	cytosol	35.98	23.63
CDY43527	Canola	cytosol	35.15	23.08
CDX70576	Canola	cytosol	16.74	21.16
OQU83236	Sorghum	cytosol	10.88	20.47
CDY70105	Canola	cytosol	24.69	19.28
CDY50119	Canola	cytosol	34.73	16.02
CDY42585	Canola	cytosol	34.73	16.02
CDY40903	Canola	cytosol	32.22	14.21
CDY62124	Canola	cytosol	23.43	11.62
CDY47150	Canola	cytosol	23.43	11.59
CDY69326	Canola	cytosol	23.43	11.59
CDY11594	Canola	cytosol	23.85	10.2
CDX95954	Canola	cytosol	32.22	9.94
CDY54149	Canola	cytosol	31.8	9.61
CDY57851	Canola	cytosol	23.85	9.56
CDY50304	Canola	cytosol	31.8	9.38
CDX85586	Canola	cytosol	25.1	9.22
CDX91026	Canola	cytosol	25.1	9.22
CDY09438	Canola	cytosol	23.01	9.14
CDX73633	Canola	cytosol	8.37	9.09
CDX69563	Canola	cytosol	25.52	9.06
CDY09880	Canola	cytosol	25.52	9.05
CDY03750	Canola	cytosol	22.59	8.96
CDY25260	Canola	cytosol	23.85	8.64
CDX94250	Canola	cytosol	23.85	8.58
CDX97641	Canola	cytosol	24.27	8.58
CDX98536	Canola	cytosol	24.27	8.58
CDY45937	Canola	cytosol	24.27	8.48
CDX86848	Canola	mitochondrion	23.85	8.46
CDY53517	Canola	mitochondrion	23.85	8.38
CDX88555	Canola	cytosol	24.27	8.37
CDX87368	Canola	cytosol	24.27	8.23
CDX67984	Canola	cytosol	23.43	8.22
CDY03490	Canola	mitochondrion	23.85	8.02
CDX79332	Canola	cytosol	23.43	8.0
CDX76327	Canola	mitochondrion	23.85	7.94
CDY25875	Canola	plastid	24.27	7.44
CDY25732	Canola	plastid	4.6	2.01
CDX76326	Canola	plastid	0.0	0.0
CDY70962	Canola	cytosol	0.0	0.0
CDY40902	Canola	nucleus	0.0	0.0
CDY03491	Canola	plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.1	Gene3D:3.30.200.20	GO:A0A078H136	UniProt:A0A078H136	EnsemblPlants:CDY32415
ProteinID:CDY32415	ProteinID:CDY32415.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00052008001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24361	PANTHER:PTHR24361:SF319	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EEFFB0	SEG:seg	:	:	:

Description

BnaC03g41990DBnaC03g41990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H136]

Coordinates

chrLK032294:+:227355..228074

Molecular Weight (calculated)

26472.7 Da

IEP (calculated)

9.150

GRAVY (calculated)

-0.324

Length

239 amino acids

Sequence
(BLAST)

001: MRRNKRPDLS LPLPNRNVAL AVPLPLPPPP SSSSALASSS AISTNISAAK SLSELERVNR IGSGAGGTVY KVIHRPTSRP FALKVIYGNH DDNVRRQICR
101: EIEILRSVDH PNVVKCHDMF DHNGEVQVLL EFMDKGSLEG RHVSREDELA DLTRQILSGL AYIHRRHIVH RDIKPSNLLI NSANNVKIAD FGVSRILAQT
201: MDPCNSSVGT IAYMSPERIN TDLNHGRYDG YAGDIWSLV

Best Arabidopsis Sequence Match ( AT1G18350.1 )
(BLAST)

001: MALVRKRRQI NLRLPVPPLS VHLPWFSFAS STAPVINNGI SASDVEKLHV LGRGSSGIVY KVHHKTTGEI YALKSVNGDM SPAFTRQLAR EMEILRRTDS
101: PYVVRCQGIF EKPIVGEVSI LMEYMDGGNL ESLRGAVTEK QLAGFSRQIL KGLSYLHSLK IVHRDIKPAN LLLNSRNEVK IADFGVSKII TRSLDYCNSY
201: VGTCAYMSPE RFDSAAGENS DVYAGDIWSF GVMILELFVG HFPLLPQGQR PDWATLMCVV CFGEPPRAPE GCSDEFRSFV DCCLRKESSE RWTASQLLGH
301: PFLRESL

Arabidopsis Description

MKK7MKK7 [Source:UniProtKB/TrEMBL;Acc:A0A178W604]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.