Factsheet for PGSC0003DMT400023739

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400023896
PGSC0003DMT400062265
PGSC0003DMT400068395
PGSC0003DMT400069203
PGSC0003DMT400077272

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G51660.1	PGSC0003DMT400062265	AT1G32380.1	21798944
AT1G51660.1	PGSC0003DMT400068395	AT1G32380.1	21798944
AT1G51660.1	PGSC0003DMT400023896	AT1G71230.1	21798944
AT1G51660.1	PGSC0003DMT400069203	AT1G71230.1	21798944
AT1G51660.1	PGSC0003DMT400077272	AT3G45640.1	19513235
AT1G51660.1	PGSC0003DMT400077272	AT3G45640.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g123800.1.1	Tomato	nucleus	94.05	96.94
CDY32415	Canola	cytosol, plastid	49.46	76.57
Bra001818.1-P	Field mustard	plastid	66.76	74.85
CDX87830	Canola	cytosol	42.97	73.95
CDX82209	Canola	plastid	65.95	73.94
CDY27532	Canola	cytosol, plastid	65.14	73.7
AT3G21220.1	Thale cress	cytosol, plastid	69.19	73.56
CDY37306	Canola	cytosol, plastid	65.68	73.41
Bra023894.1-P	Field mustard	cytosol, plastid	65.41	73.11
CDX82210	Canola	plastid	60.27	72.88
GSMUA_Achr9P13590_001	Banana	mitochondrion	46.22	72.77
CDY46547	Canola	cytosol, plastid	69.46	72.39
Bra014295.1-P	Field mustard	cytosol, plastid	69.19	72.11
CDY52951	Canola	cytosol	69.19	71.91
AT1G51660.1	Thale cress	plastid	70.81	71.58
CDY43920	Canola	cytosol, plastid	64.32	70.62
Bra030430.1-P	Field mustard	cytosol, plastid	64.05	70.33
KRH47006	Soybean	cytosol, plastid	65.95	69.52
HORVU7Hr1G031720.2	Barley	cytosol	50.0	69.29
GSMUA_Achr4P05870_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	60.54	67.47
KRH44646	Soybean	cytosol, plastid	66.22	67.31
GSMUA_Achr9P22810_001	Banana	cytosol	23.24	67.19
VIT_09s0018g01820.t01	Wine grape	plastid	74.05	65.24
Zm00001d045064_P001	Maize	extracellular, plasma membrane	60.54	64.55
TraesCS7B01G059000.1	Wheat	plastid	60.0	64.35
TraesCS7A01G154900.1	Wheat	plastid	60.27	63.9
TraesCS7D01G155100.1	Wheat	plastid	60.27	63.9
OQU83236	Sorghum	cytosol	21.89	63.78
KXG19514	Sorghum	plastid	59.19	63.11
CDY32414	Canola	extracellular, plasma membrane	61.35	62.71
Os06t0191300-01	Rice	plasma membrane	57.84	62.57
Os02t0787300-01	Rice	plasma membrane	61.08	61.25
Zm00001d018326_P001	Maize	plastid	58.65	60.96
Bra001817.1-P	Field mustard	cytosol	62.16	60.69
HORVU5Hr1G067100.2	Barley	cytosol	37.57	59.91
Zm00001d052066_P001	Maize	plastid	58.65	59.62
OQU85840	Sorghum	plastid	59.73	59.41
TraesCS6B01G379500.1	Wheat	cytosol, plastid	59.73	59.41
TraesCS6D01G328800.1	Wheat	cytosol, plastid	58.92	59.24
HORVU0Hr1G038850.2	Barley	cytosol	42.97	53.9
GSMUA_Achr3P05000_001	Banana	plastid	63.51	51.76
PGSC0003DMT400083995	Potato	cytosol	42.16	46.85
Os06t0191500-01	Rice	cytosol, plastid	36.22	43.79
PGSC0003DMT400014637	Potato	cytosol	34.86	36.44
PGSC0003DMT400000744	Potato	cytosol	34.86	36.13
PGSC0003DMT400074400	Potato	cytosol	22.97	22.79
PGSC0003DMT400039329	Potato	cytosol	30.54	21.94
PGSC0003DMT400042095	Potato	cytosol	22.43	15.87
PGSC0003DMT400036874	Potato	cytosol	23.51	12.97
PGSC0003DMT400031593	Potato	nucleus	4.86	3.81

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.2.1	Gene3D:3.30.200.20	EMBL:AB091780	ProteinID:BAC81698	ProteinID:BAC81698.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M1AIW8	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400009183	PGSC:PGSC0003DMG400009183	EnsemblPlants:PGSC0003DMT400023739	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF319	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002961721	SEG:seg

Description

Mitogen-activated protein kinase kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400009183]

Coordinates

chr3:-:61806820..61808546

Molecular Weight (calculated)

40821.7 Da

IEP (calculated)

8.670

GRAVY (calculated)

-0.373

Length

370 amino acids

Sequence
(BLAST)

001: MRPTQPAANS TSSAAASSMP PPSSAGQRSR PRRRTDLTLP LPQRDVALAV PLPLPPTSAP SSSTSSSSSP LPTPLHFSEL ERVNRIGSGT GGTVYKVLHR
101: PTGRLYALKV IYGNHEDSVR LQMCREIEIL RDVDNPNVVR CHDMFDHNGE IQVLLEFMDK GSLEGIHIPL EQPLSDLTRQ VLSGLYYLHR RKIVHRDIKP
201: SNLLINSRRE VKIADFGVSR VLAQTMDPCN SSVGTIAYMS PERINTDLNH GQYDGYAGDI WSLGVSILEF YLGRFPFSVG RQGDWASLMC AICMSQPPEA
301: PPTASREFRE FIACCLQRDP ARRWTAAQLL RHPFITQNSP GTHTGPATTS LSNQAHQLLP PPPHFSSSSS

Best Arabidopsis Sequence Match ( AT1G51660.1 )
(BLAST)

001: MRPIQSPPGV SVPVKSRPRR RPDLTLPLPQ RDVSLAVPLP LPPTSGGSGG SSGSAPSSGG SASSTNTNSS IEAKNYSDLV RGNRIGSGAG GTVYKVIHRP
101: SSRLYALKVI YGNHEETVRR QICREIEILR DVNHPNVVKC HEMFDQNGEI QVLLEFMDKG SLEGAHVWKE QQLADLSRQI LSGLAYLHSR HIVHRDIKPS
201: NLLINSAKNV KIADFGVSRI LAQTMDPCNS SVGTIAYMSP ERINTDLNQG KYDGYAGDIW SLGVSILEFY LGRFPFPVSR QGDWASLMCA ICMSQPPEAP
301: ATASPEFRHF ISCCLQREPG KRRSAMQLLQ HPFILRASPS QNRSPQNLHQ LLPPPRPLSS SSSPTT

Arabidopsis Description

MKK4MKK4 [Source:UniProtKB/TrEMBL;Acc:A0A178WCC0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.