Factsheet for PGSC0003DMT400068395

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g061040.2.1	Tomato	plastid	94.25	93.55
GSMUA_Achr11P...	Banana	cytosol, plastid	65.25	77.45
CDY68772	Canola	endoplasmic reticulum, golgi	62.75	75.6
GSMUA_Achr2P12090_001	Banana	cytosol, mitochondrion	62.5	75.3
PGSC0003DMT400062265	Potato	plastid	73.5	74.06
KRH57590	Soybean	nucleus	71.0	72.26
VIT_02s0012g00530.t01	Wine grape	plastid	70.75	71.28
Bra023263.1-P	Field mustard	plastid	70.0	70.89
CDY01279	Canola	plastid	70.25	70.78
HORVU6Hr1G015080.5	Barley	mitochondrion	66.0	70.59
CDX93837	Canola	plastid	70.0	70.53
AT1G32380.1	Thale cress	plastid	70.5	70.5
KRH04308	Soybean	plastid	70.5	69.46
CDY31684	Canola	plastid	69.0	69.17
CDX84209	Canola	plastid	69.0	69.17
Bra005344.1-P	Field mustard	plastid	69.0	69.17
CDY32299	Canola	plastid	70.0	68.97
AT2G35390.2	Thale cress	plastid	68.75	68.24
PGSC0003DMT400056411	Potato	plastid	67.5	68.18
Zm00001d015115_P001	Maize	plastid	67.75	67.92
Os02t0127700-02	Rice	plastid	67.0	67.68
EES06216	Sorghum	plastid	67.25	67.59
TraesCS6B01G110600.1	Wheat	plastid	67.0	66.34
TraesCS6A01G088200.2	Wheat	nucleus	66.75	66.25
TraesCSU01G018200.1	Wheat	plastid	66.25	65.76
Bra010159.1-P	Field mustard	plastid	26.5	46.49
PGSC0003DMT400044713	Potato	cytosol	18.25	22.81
PGSC0003DMT400054829	Potato	cytosol	17.5	22.15
PGSC0003DMT400035565	Potato	cytosol	5.5	17.32

Protein Annotations

KEGG:00030+2.7.6.1	KEGG:00230+2.7.6.1	EntrezGene:102584227	Gene3D:3.40.50.2020	MapMan:50.2.7	GO:GO:0000287
GO:GO:0003674	GO:GO:0003824	GO:GO:0004749	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009116	GO:GO:0009156	GO:GO:0009165	GO:GO:0009987
GO:GO:0016740	GO:GO:0044249	UniProt:M1CJ01	HAMAP:MF_00583_B	PFAM:PF13793	PFAM:PF14572
EnsemblPlantsGene:PGSC0003DMG400026596	PGSC:PGSC0003DMG400026596	EnsemblPlants:PGSC0003DMT400068395	InterPro:PRTase-like	InterPro:PRibTrfase_dom	InterPro:PRib_PP_synth_CS
ScanProsite:PS00114	PANTHER:PTHR10210	PANTHER:PTHR10210:SF54	InterPro:Pribosyltran_N	InterPro:Rib-P_diPkinase	InterPro:Rib-P_diPkinase_bac
SMART:SM01400	SUPFAM:SSF53271	TIGRFAMs:TIGR01251	UniParc:UPI000295396B	RefSeq:XP_015170627.1	SEG:seg

Description

Ribose-phosphate pyrophosphokinase [Source:PGSC_GENE;Acc:PGSC0003DMG400026596]

Coordinates

chr6:-:44527385..44536896

Molecular Weight (calculated)

43853.9 Da

IEP (calculated)

6.703

GRAVY (calculated)

-0.014

Length

400 amino acids

Sequence
(BLAST)

001: MASFTLLSSF SSAKKNTLIS SFSSSSSLYR TSLALKRTRP PNSVINCEIN EPVNEKPTVP IINDVILPTF LQAKCLENAV NRDNTKLNPK LKLFSGTANP
101: SLSEEIAWNM GHELEKITIK RFADGEIYIQ LQESVRGCDV FLIQPTCPPA NENLMELLVM IDACRRASAK NITAVIPYFG YARADRKTQN RQSIAAKLVG
201: NVITEAGADR VIACDLHSGQ SMGYFDIPVD HLQCQPVITD YLASKKISSN DLVVVSPDVG GVARARAFAK KLDAPLAIVD KRRQEHNLAE VMNLIGDVKG
301: KVAVMVDDMI DTAGTICKGA ELLHEEGARE IYACCTHGVF SPPAIELLSS GLFEEVITTN TIPVMDRHYF PQLTVLSVAN LLGETIWRVH GDRSVSSIFQ

Best Arabidopsis Sequence Match ( AT1G32380.1 )
(BLAST)

001: MASLALTSPP SVKIPSYLSS SSSSLFSRSS ISFRTTESRS RICVSGYAKC NLPKALNGNA RVPIINETTI PKFFDSSRLE KSVSRNNTKL KLFSGTANPA
101: LSQEIAWYMG LELGKVSIKR FADGEIYVQL KESVRGCDVF LVQPTCTPTN ENLMELLIMV DACRRASAKK VTAVIPYFGY ARADRKTQGR ESIAAKLVAN
201: LITEAGADRV LACDLHSGQS MGYFDIPVDH VYCQPVILDY LASKSISSED LVVVSPDVGG VARARAFAKK LSDAPLAIVD KRRHGHNVAE VMNLIGDVKG
301: KVAVMVDDII DTAGTIVKGA ALLHEEGARE VYACCTHAVF SPPAIERLSS GLLQEVIVTN TLPVAEKNYF PQLTILSVAN LLGETIWRVH DDSSVSSIFL

Arabidopsis Description

PRS2Ribose-phosphate pyrophosphokinase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42583]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.