Factsheet for Zm00001d015115_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

extracellular: 20408568
plastid: 22065420
plastid: 23198870

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES06216	Sorghum	plastid	94.99	95.23
Os02t0127700-02	Rice	plastid	90.73	91.41
HORVU6Hr1G015080.5	Barley	mitochondrion	82.96	88.5
Solyc10g024410.1.1	Tomato	cytosol, nucleus	63.41	87.24
TraesCS6A01G088200.2	Wheat	nucleus	87.22	86.35
TraesCS6B01G110600.1	Wheat	plastid	86.97	85.89
TraesCSU01G018200.1	Wheat	plastid	86.72	85.86
GSMUA_Achr2P12090_001	Banana	cytosol, mitochondrion	67.42	81.02
CDY68772	Canola	endoplasmic reticulum, golgi	63.91	76.81
KRH66354	Soybean	nucleus	75.94	75.0
KRH48933	Soybean	plastid	75.44	74.88
VIT_15s0021g00460.t01	Wine grape	plastid	74.94	74.19
CDY30476	Canola	plastid	73.68	73.32
AT2G44530.1	Thale cress	plastid	72.18	73.1
CDY23440	Canola	plastid	70.18	72.92
KRH57590	Soybean	nucleus	71.43	72.52
PGSC0003DMT400062265	Potato	plastid	71.43	71.79
PGSC0003DMT400056411	Potato	plastid	71.18	71.72
Solyc08g077200.2.1	Tomato	plastid	71.18	71.54
VIT_02s0012g00530.t01	Wine grape	plastid	70.68	71.03
Bra037645.1-P	Field mustard	plastid	73.68	71.01
Bra023263.1-P	Field mustard	plastid	69.42	70.13
KRH04308	Soybean	plastid	71.18	69.95
CDY31684	Canola	plastid	69.92	69.92
CDX84209	Canola	plastid	69.92	69.92
Bra005344.1-P	Field mustard	plastid	69.92	69.92
CDY01279	Canola	plastid	69.42	69.77
AT2G35390.2	Thale cress	plastid	70.43	69.73
CDX93837	Canola	plastid	69.17	69.52
AT1G32380.1	Thale cress	plastid	69.17	69.0
CDY32299	Canola	plastid	69.42	68.23
PGSC0003DMT400068395	Potato	plastid	67.92	67.75
Solyc06g061040.2.1	Tomato	plastid	67.67	67.0
Zm00001d046742_P002	Maize	plastid	62.16	62.63
Zm00001d027256_P001	Maize	cytosol, mitochondrion	43.36	51.18
Bra010159.1-P	Field mustard	plastid	28.32	49.56
Zm00001d017833_P001	Maize	cytosol, extracellular, mitochondrion	17.54	21.54
Zm00001d051634_P001	Maize	cytosol	16.79	20.62
Zm00001d043600_P001	Maize	plastid	15.04	16.76

Protein Annotations

KEGG:00030+2.7.6.1	KEGG:00230+2.7.6.1	EntrezGene:100272744	Gene3D:3.40.50.2020	MapMan:50.2.7	ProteinID:AQK68108.1
ProteinID:AQK68109.1	UniProt:B4FQE0	EMBL:BT039328	EMBL:BT040125	EMBL:EU969765	GO:GO:0000287
GO:GO:0003674	GO:GO:0003824	GO:GO:0004749	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009116	GO:GO:0009156	GO:GO:0009165	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0044249	EMBL:GQ253964	HAMAP:MF_00583_B
PFAM:PF13793	PFAM:PF14572	InterPro:PRTase-like	InterPro:PRibTrfase_dom	InterPro:PRib_PP_synth_CS	ScanProsite:PS00114
PANTHER:PTHR10210	PANTHER:PTHR10210:SF86	InterPro:Pribosyltran_N	InterPro:Rib-P_diPkinase	InterPro:Rib-P_diPkinase_bac	SMART:SM01400
SUPFAM:SSF53271	TIGRFAMs:TIGR01251	UniParc:UPI00017B77D2	EnsemblPlantsGene:Zm00001d015115	EnsemblPlants:Zm00001d015115_P001	EnsemblPlants:Zm00001d015115_T001
SEG:seg	:	:	:	:	:

Description

Ribose-phosphate pyrophosphokinase

Coordinates

chr5:-:76220204..76227763

Molecular Weight (calculated)

42950.9 Da

IEP (calculated)

7.083

GRAVY (calculated)

0.020

Length

399 amino acids

Sequence
(BLAST)

001: MPPCCSPTTS AVTAAAASPG ASRSGGLLRR SRPAPAAVNC KKIDSLRSIN GAPPCIPVSN RSLLTPVTLP VFRDPNMRND TRLRIFSGTA NPSLSQEIAS
101: YLGLELGKIT IKRFADGEIY VQLQESVRGC DVFLVQPSCP PANENLMELL IMIDACRRAS AKNITAVIPY FGYARADRKS QGRESIAAKL VANMITEAGA
201: NRVLVCDLHS SQAMGYFDIP VDHVYGQPVI LDYLASKTIC SDDLVVVSPD VGGVARARAF AKKLSDAPLA IVDKRRQGHN VAEVMNLIGD VRGKVAVMMD
301: DMIDTAGTIS KGAELLHQEG AREVYACCTH GVFSPPAIER LSSGLFQEVI ITNTIPLKEE KSFPQLTILS VANLLGETIW RVHDDCSVGH EPYSSLDID

Best Arabidopsis Sequence Match ( AT2G44530.1 )
(BLAST)

001: MASIVQPSPT FPALNLRRSS LIRPPSSVRF PLKCNAADPY KFDGGNSAGF HLLTGDTVPA SFSRTRLEDS IYQNTTRLRI FSGTANPILA QEISCYLGLD
101: LGKIKIKRFA DGEIYVQLQE SVRGCDVFLV QPTCPPANEN LMELLVMIDA CRRASAKTIT AVIPYFGYAR ADRKTQGRES IAAKLVANLI TQSGADRVLA
201: CDLHSGQSMG YFDIPVDHVY GQPVILDYLA SKAISSEDLV VVSPDVGGVA RARAFAKKLS DAPLAIVDKR RHGHNVAEVM NLIGDVKGKV AIMVDDMIDT
301: AGTISKGAAL LHQEGAREVY ACTTHAVFSP PAISRLSSGL FQEVIITNTI PLSEKNYFPQ LTVLSVANLL GETIWRVHDD CSGAIEPFST LGID

Arabidopsis Description

PRS5Ribose-phosphate pyrophosphokinase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64888]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.