Factsheet for TraesCS6A01G088200.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

nucleus: 26228564

msms PMID: 26228564 doi

E Bancel, T Bonnot, M Davanture, G Branlard, M Zivy, P Martre

Blaise Pascal University, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Avenue des Landais, F-63 170 Aubière, France., CNRS, PAPPSO, UMR 0320/8120 Génétique Quantitative et Évolution - Le Moulon, F-91190 Gif-sur-Yvette, France., INRA, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, 5 chemin de Beaulieu, F-63 039 Clermont-Ferrand, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G110600.1	Wheat	plastid	99.75	99.5
TraesCSU01G018200.1	Wheat	plastid	99.5	99.5
HORVU6Hr1G015080.5	Barley	mitochondrion	89.33	96.26
Os02t0127700-02	Rice	plastid	88.83	90.4
EES06216	Sorghum	plastid	88.09	89.2
Solyc10g024410.1.1	Tomato	cytosol, nucleus	63.03	87.59
Zm00001d015115_P001	Maize	plastid	86.35	87.22
GSMUA_Achr2P12090_001	Banana	cytosol, mitochondrion	67.0	81.33
CDY68772	Canola	endoplasmic reticulum, golgi	63.77	77.41
KRH66354	Soybean	nucleus	74.69	74.5
VIT_15s0021g00460.t01	Wine grape	plastid	74.19	74.19
KRH48933	Soybean	plastid	73.95	74.13
AT2G44530.1	Thale cress	plastid	71.46	73.1
CDY30476	Canola	plastid	72.7	73.07
CDY23440	Canola	plastid	69.48	72.92
PGSC0003DMT400056411	Potato	plastid	71.22	72.47
PGSC0003DMT400062265	Potato	plastid	71.22	72.29
KRH57590	Soybean	nucleus	70.47	72.26
Solyc08g077200.2.1	Tomato	plastid	70.97	72.04
VIT_02s0012g00530.t01	Wine grape	plastid	70.22	71.28
Bra037645.1-P	Field mustard	plastid	72.7	70.77
AT2G35390.2	Thale cress	plastid	70.47	70.47
Bra005344.1-P	Field mustard	plastid	69.23	69.92
CDX84209	Canola	plastid	69.23	69.92
CDY31684	Canola	plastid	69.23	69.92
Bra023263.1-P	Field mustard	plastid	68.49	69.87
CDY01279	Canola	plastid	68.49	69.52
AT1G32380.1	Thale cress	plastid	68.98	69.5
KRH04308	Soybean	plastid	69.98	69.46
TraesCS5A01G546100.1	Wheat	plastid	67.49	69.39
CDX93837	Canola	plastid	68.24	69.27
CDY32299	Canola	plastid	68.49	67.98
PGSC0003DMT400068395	Potato	plastid	66.25	66.75
Solyc06g061040.2.1	Tomato	plastid	65.76	65.76
TraesCS7A01G402500.1	Wheat	plastid	63.03	63.5
Bra010159.1-P	Field mustard	plastid	27.3	48.25
TraesCS6A01G279400.1	Wheat	plastid	19.85	19.14
TraesCS3A01G285700.1	Wheat	plastid	18.61	18.43

Protein Annotations

KEGG:00030+2.7.6.1	KEGG:00230+2.7.6.1	Gene3D:3.40.50.2020	MapMan:50.2.7	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0004749	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009116	GO:GO:0009156	GO:GO:0009165	GO:GO:0009987	GO:GO:0016740
GO:GO:0044249	HAMAP:MF_00583_B	PFAM:PF13793	PFAM:PF14572	InterPro:PRTase-like	InterPro:PRibTrfase_dom
InterPro:PRib_PP_synth_CS	ScanProsite:PS00114	PANTHER:PTHR10210	PANTHER:PTHR10210:SF86	InterPro:Pribosyltran_N	InterPro:Rib-P_diPkinase
InterPro:Rib-P_diPkinase_bac	SMART:SM01400	SUPFAM:SSF53271	TIGRFAMs:TIGR01251	EnsemblPlantsGene:TraesCS6A01G088200	EnsemblPlants:TraesCS6A01G088200.2
TIGR:cd06223	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:56244423..56249974

Molecular Weight (calculated)

43410.4 Da

IEP (calculated)

7.738

GRAVY (calculated)

0.009

Length

403 amino acids

Sequence
(BLAST)

001: MPLPSSSSAA AVAAGPAASP LAARSRGRLL RARSGHAAVR CQRVDPVRLR AVNGSPPCVP LSDRSPWTPA TMPIFGDANI RKDDTRLRIF SGTANPSLAQ
101: EIASYMGLEL GKINIKRFAD GEIYVQLQES VRGCDVFLVQ PSCPPANENL MELLIMIDAC RRASAKNITA VIPYFGYARA DRKSQGRESI AAKLVANMIT
201: EAGANRVLVC DLHSSQAMGY FDIPVDHVYG QPVILDYLAS KTISSNDLVV VSPDVGGVAR ARAFAKKLSD APLAIVDKRR HGHNVAEVMN LIGDVRGKVA
301: VMMDDMIDTA GTIAKGAELL HQEGAREVYA CCTHAVFSPP AIERLSSGLF QEVIITNTIP LKEEKNFPQL TILSVANLLG ETIWRVHDDC SVGHAPYSTL
401: DID

Best Arabidopsis Sequence Match ( AT2G44530.1 )
(BLAST)

001: MASIVQPSPT FPALNLRRSS LIRPPSSVRF PLKCNAADPY KFDGGNSAGF HLLTGDTVPA SFSRTRLEDS IYQNTTRLRI FSGTANPILA QEISCYLGLD
101: LGKIKIKRFA DGEIYVQLQE SVRGCDVFLV QPTCPPANEN LMELLVMIDA CRRASAKTIT AVIPYFGYAR ADRKTQGRES IAAKLVANLI TQSGADRVLA
201: CDLHSGQSMG YFDIPVDHVY GQPVILDYLA SKAISSEDLV VVSPDVGGVA RARAFAKKLS DAPLAIVDKR RHGHNVAEVM NLIGDVKGKV AIMVDDMIDT
301: AGTISKGAAL LHQEGAREVY ACTTHAVFSP PAISRLSSGL FQEVIITNTI PLSEKNYFPQ LTVLSVANLL GETIWRVHDD CSGAIEPFST LGID

Arabidopsis Description

PRS5Ribose-phosphate pyrophosphokinase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64888]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.