Factsheet for TraesCS5A01G546100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G130100.1	Wheat	plastid	94.9	94.66
TraesCS4B01G379900.1	Wheat	mitochondrion, plastid	87.24	80.28
Os03t0100040-01	Rice	plastid	72.96	74.87
OQU93498	Sorghum	plastid	74.23	73.86
TraesCS6A01G088200.2	Wheat	nucleus	69.39	67.49
TraesCS7A01G402500.1	Wheat	plastid	64.54	63.25
Zm00001d027256_P001	Maize	cytosol, mitochondrion	44.64	51.78
TraesCS3A01G285700.1	Wheat	plastid	19.13	18.43
TraesCS6A01G279400.1	Wheat	plastid	18.37	17.22

Protein Annotations

KEGG:00030+2.7.6.1	KEGG:00230+2.7.6.1	Gene3D:3.40.50.2020	MapMan:50.2.7	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0004749	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009116	GO:GO:0009165	GO:GO:0009987	GO:GO:0016740	HAMAP:MF_00583_B
PFAM:PF13793	PFAM:PF14572	InterPro:PRTase-like	InterPro:PRibTrfase_dom	PANTHER:PTHR10210	PANTHER:PTHR10210:SF85
InterPro:Pribosyltran_N	InterPro:Rib-P_diPkinase	InterPro:Rib-P_diPkinase_bac	SMART:SM01400	SUPFAM:SSF53271	TIGRFAMs:TIGR01251
EnsemblPlantsGene:TraesCS5A01G546100	EnsemblPlants:TraesCS5A01G546100.1	TIGR:cd06223	SEG:seg	:	:

Description

No Description!

Coordinates

chr5A:-:700448809..700449987

Molecular Weight (calculated)

42442.2 Da

IEP (calculated)

7.935

GRAVY (calculated)

-0.019

Length

392 amino acids

Sequence
(BLAST)

001: MMASATMATC FCSSSSFSPP DLAAVHSPPS SSPSRRRRRR RWSCRASSTG GTYDHNPLLQ PPPDPHFPLR LPVQDGSSGS RLRIFSGTAN PTLAEEIACY
101: LGLELGLIKI KRFADGELYV QLQESVRGSD VFLVQPTCPP ANENLMELLI MVDACRRASA KTITAVVPYF GYARADRKMQ GRESIAAKLV ANLITEAGAH
201: RVLACDLHSG QSIGYFDIPV DHVYGQPVIL DYLASKTICP NDVVVVSPDV GGVARARAFA KKLSDAPLAI VDKRRLGHNQ AEVMNLIGDV RGKVAVMVDD
301: MIDTAGTMHK GAELLHREGA RAVYACSTHA VLSPPAVERL SGGLFQEVII TNTVPVPPDQ RFPQLTVLSV ANLLGETIWR VHDECSVSSI FQ

Best Arabidopsis Sequence Match ( AT2G35390.2 )
(BLAST)

001: MASLGLSFPP AAKTPTYLAS SSSTFFSNSS LSVRTSQFRS RNSVFACVKC DMPESLNVGN GNPSIPIINE RTLPKFLESA RMEKSVNRTN TRLKLFSGTA
101: NPALAQEIAW YMGLDLGKVN IKRFADGEIY VQLQESVRGC DVYLVQPTCT PTNENLMELL IMVDACRRAS AKKVTAVIPY FGYARADRKT QGRESIAAKL
201: VANLITEAGA DRVLACDLHS GQSMGYFDIP VDHVYCQPVI LDYLASKSIP SEDLVVVSPD VGGVARARAF AKKLSDAPLA IVDKRRSGHN VAEVMNLIGD
301: VRGKVAIMVD DMIDTAGTIV KGAALLHQEG AREVYACCTH AVFSPPAIER LSGGLLQEVI VTNTLPVAEK NYFPQLTILS VANLLGETIW RVHDDSSVSS
401: IFL

Arabidopsis Description

PRS1Ribose-phosphate pyrophosphokinase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42581]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.