Factsheet for Os03t0100040-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G130100.1	Wheat	plastid	75.13	73.03
TraesCS5A01G546100.1	Wheat	plastid	74.87	72.96
OQU93498	Sorghum	plastid	75.13	72.84
Os02t0127700-02	Rice	plastid	70.68	68.18
TraesCS4B01G379900.1	Wheat	mitochondrion, plastid	75.92	68.08
Os06t0617800-01	Rice	plastid	53.66	52.97
Zm00001d027256_P001	Maize	cytosol, mitochondrion	45.03	50.89
Os02t0714600-01	Rice	cytosol, extracellular, nucleus, plasma membrane	18.32	21.54
Os01t0723600-01	Rice	plastid	19.37	18.09

Protein Annotations

KEGG:00030+2.7.6.1	KEGG:00230+2.7.6.1	EntrezGene:107276220	Gene3D:3.40.50.2020	MapMan:50.2.7	UniProt:A3AD51
ProteinID:BAS81803.1	ProteinID:EAZ25240.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004749
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009116	GO:GO:0009165	GO:GO:0009536
GO:GO:0009987	GO:GO:0016740	HAMAP:MF_00583_B	EnsemblPlantsGene:Os03g0100040	EnsemblPlants:Os03t0100040-01	PFAM:PF13793
PFAM:PF14572	InterPro:PRTase-like	InterPro:PRibTrfase_dom	PANTHER:PTHR10210	PANTHER:PTHR10210:SF85	InterPro:Pribosyltran_N
InterPro:Rib-P_diPkinase	InterPro:Rib-P_diPkinase_bac	SMART:SM01400	SUPFAM:SSF53271	TIGRFAMs:TIGR01251	UniParc:UPI0000F175A9
RefSeq:XP_015627898.1	SEG:seg	:	:	:	:

Description

Similar to Ribose-phosphate pyrophosphokinase 1 (EC 2.7.6.1) (Phosphoribosyl pyrophosphate synthetase 1). (Os03t0100040-01)

Coordinates

chr3:+:19107..20472

Molecular Weight (calculated)

40654.0 Da

IEP (calculated)

8.326

GRAVY (calculated)

0.114

Length

382 amino acids

Sequence
(BLAST)

001: MAFFVKISAP CSLAGHGTTS SSSGSSRSKR GLLLPVGAGA GAGAYGGRQY SDVVPVPALS QAQASSSGGR LRIFSGTANP RLAQEVACYL GMELGRVKIK
101: RFADGELYVQ LQESVRGCDV FLVQPTCPPA NENLMELLIM IDACRRASAK TITAVVPYFG YARADRKMRG GRESIAAKLV ANLITEAGAH RVLACDLHSG
201: QSIGYFDIPV DHVYGQPVIL DYLASKTICP DEVVVVSPDV GGVARARTFA KKLSDAPLAI VDKRRQGHNQ SEVVHLIGDV RGKVAVMVDD MIDTAGTVSQ
301: GAELLHREGA RAVYACSTHA VLSPPAVDRL SSGLFQEVIV TNTVPVLHHR TFPQLTVLSV ANLLGETIWR VHDDCSVSSI FQ

Best Arabidopsis Sequence Match ( AT2G44530.1 )
(BLAST)

001: MASIVQPSPT FPALNLRRSS LIRPPSSVRF PLKCNAADPY KFDGGNSAGF HLLTGDTVPA SFSRTRLEDS IYQNTTRLRI FSGTANPILA QEISCYLGLD
101: LGKIKIKRFA DGEIYVQLQE SVRGCDVFLV QPTCPPANEN LMELLVMIDA CRRASAKTIT AVIPYFGYAR ADRKTQGRES IAAKLVANLI TQSGADRVLA
201: CDLHSGQSMG YFDIPVDHVY GQPVILDYLA SKAISSEDLV VVSPDVGGVA RARAFAKKLS DAPLAIVDKR RHGHNVAEVM NLIGDVKGKV AIMVDDMIDT
301: AGTISKGAAL LHQEGAREVY ACTTHAVFSP PAISRLSSGL FQEVIITNTI PLSEKNYFPQ LTVLSVANLL GETIWRVHDD CSGAIEPFST LGID

Arabidopsis Description

PRS5Ribose-phosphate pyrophosphokinase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64888]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.