CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0100040-01	Rice	plastid	72.84	75.13
TraesCSU01G130100.1	Wheat	plastid	74.11	74.3
TraesCS5A01G546100.1	Wheat	plastid	73.86	74.23
EES06216	Sorghum	plastid	71.57	70.85
TraesCS4B01G379900.1	Wheat	mitochondrion, plastid	74.62	69.01
EER90051	Sorghum	plastid	61.17	60.4
Zm00001d027256_P001	Maize	cytosol, mitochondrion	46.45	54.14
EES07369	Sorghum	cytosol	18.27	21.69
EES01390	Sorghum	plastid	17.01	16.46

Protein Annotations

KEGG:00030+2.7.6.1	KEGG:00230+2.7.6.1	Gene3D:3.40.50.2020	MapMan:50.2.7	UniProt:A0A1Z5SC49	GO:GO:0000287
GO:GO:0003674	GO:GO:0003824	GO:GO:0004749	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009116	GO:GO:0009165	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	HAMAP:MF_00583_B
EnsemblPlants:OQU93498	ProteinID:OQU93498	ProteinID:OQU93498.1	PFAM:PF13793	PFAM:PF14572	InterPro:PRTase-like
InterPro:PRibTrfase_dom	PANTHER:PTHR10210	PANTHER:PTHR10210:SF85	InterPro:Pribosyltran_N	InterPro:Rib-P_diPkinase	InterPro:Rib-P_diPkinase_bac
SMART:SM01400	EnsemblPlantsGene:SORBI_3001G544600	SUPFAM:SSF53271	TIGRFAMs:TIGR01251	UniParc:UPI000B8BA46E	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:80876468..80878678

Molecular Weight (calculated)

42528.6 Da

IEP (calculated)

8.545

GRAVY (calculated)

0.103

Length

394 amino acids

Sequence
(BLAST)

001: MSCHVPGVAA QTQLGPSAWA RWPLYRAVLD RPRRHGRIGI ATIMCTSSSM HGYGYDSSSL PSLSLPFPIP APRGVTSTGS GSRLRIFSGS ANPVLAQEIA
101: CYLGMELGKI KIKRFADGEI YVQLQESVRG CDVFLVQPTC PPANENLMEL LIMIDACRRA SAKNITAVIP YFGYARADRK MQGRESIAAK LVANLITEAG
201: AHRVLACDLH SGQSIGYFDI PVDHVYGQPV ILDYLASKTI CPNDVVVVSP DVGGVARARA FAKKLSDAPL AIVDKRRQGH NQAEVVNLIG DVRGKVAVMV
301: DDMIDTAGTI SKGAELLHKE GARAVYACST HAVFSPPALQ RLSSGLFQEV IITNTVPVQH LHSFPQLTVL SVANLLGETI WRVHDDCSLS SIFK

Best Arabidopsis Sequence Match ( AT2G44530.1 )
(BLAST)

001: MASIVQPSPT FPALNLRRSS LIRPPSSVRF PLKCNAADPY KFDGGNSAGF HLLTGDTVPA SFSRTRLEDS IYQNTTRLRI FSGTANPILA QEISCYLGLD
101: LGKIKIKRFA DGEIYVQLQE SVRGCDVFLV QPTCPPANEN LMELLVMIDA CRRASAKTIT AVIPYFGYAR ADRKTQGRES IAAKLVANLI TQSGADRVLA
201: CDLHSGQSMG YFDIPVDHVY GQPVILDYLA SKAISSEDLV VVSPDVGGVA RARAFAKKLS DAPLAIVDKR RHGHNVAEVM NLIGDVKGKV AIMVDDMIDT
301: AGTISKGAAL LHQEGAREVY ACTTHAVFSP PAISRLSSGL FQEVIITNTI PLSEKNYFPQ LTVLSVANLL GETIWRVHDD CSGAIEPFST LGID

Arabidopsis Description

PRS5Ribose-phosphate pyrophosphokinase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64888]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.