Factsheet for Zm00001d027256_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU93498	Sorghum	plastid	54.14	46.45
Os03t0100040-01	Rice	plastid	50.89	45.03
TraesCS5A01G546100.1	Wheat	plastid	51.78	44.64
TraesCSU01G130100.1	Wheat	plastid	51.78	44.53
Zm00001d015115_P001	Maize	plastid	51.18	43.36
TraesCS4B01G379900.1	Wheat	mitochondrion, plastid	52.37	41.55
Zm00001d046742_P002	Maize	plastid	45.86	39.14
Zm00001d017833_P001	Maize	cytosol, extracellular, mitochondrion	13.31	13.85
Zm00001d051634_P001	Maize	cytosol	13.02	13.54
Zm00001d043600_P001	Maize	plastid	11.24	10.61

Protein Annotations

KEGG:00030+2.7.6.1	KEGG:00230+2.7.6.1	Gene3D:3.40.50.2020	MapMan:35.1	UniProt:A0A1D6JJC0	GO:GO:0000287
GO:GO:0003674	GO:GO:0003824	GO:GO:0004749	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009116	GO:GO:0009165	GO:GO:0009536	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	ProteinID:ONL92444.1	PFAM:PF00156	PFAM:PF13793	InterPro:PRTase-like	InterPro:PRibTrfase_dom
PANTHER:PTHR10210	PANTHER:PTHR10210:SF85	InterPro:Pribosyltran_N	SMART:SM01400	SUPFAM:SSF53271	UniParc:UPI000843B2F0
EnsemblPlantsGene:Zm00001d027256	EnsemblPlants:Zm00001d027256_P001	EnsemblPlants:Zm00001d027256_T001	SEG:seg	:	:

Description

Ribose-phosphate pyrophosphokinase 2 chloroplastic

Coordinates

chr1:+:559525..560974

Molecular Weight (calculated)

37175.2 Da

IEP (calculated)

10.153

GRAVY (calculated)

-0.316

Length

338 amino acids

Sequence
(BLAST)

001: MVAQLGQGRR REISCYLGLE LRQIKIERFV DGGIYVQLEE SVHGCDVFQV QPTCPPSNEN LMELLIMIDA CRRASAKNIN AGIPYFGYAR ADKKVQGARL
101: HRRQAGGQPH HGGRRPPRAG LRTPLGSVHR LLRHPRGPRV HSQPIILDYL ASKTICPEDV VVVSPDMGGV ARPRAFAKKL SDAPLAIVDK RRPGHNQAEV
201: VHLIDDVRGK VVVMLSDAPL AIVDKRRPGH NQAEVVHLIH DVRGKVVVMV DGMINTTENI SKGAELLHKG SASCVHLQHP RGPQQPTRAP EALQRPLPGG
301: DHHQHRAGAQ LTVLSVANLL GETIWRVHDD CSVSSIFQ

Best Arabidopsis Sequence Match ( AT1G32380.1 )
(BLAST)

001: MASLALTSPP SVKIPSYLSS SSSSLFSRSS ISFRTTESRS RICVSGYAKC NLPKALNGNA RVPIINETTI PKFFDSSRLE KSVSRNNTKL KLFSGTANPA
101: LSQEIAWYMG LELGKVSIKR FADGEIYVQL KESVRGCDVF LVQPTCTPTN ENLMELLIMV DACRRASAKK VTAVIPYFGY ARADRKTQGR ESIAAKLVAN
201: LITEAGADRV LACDLHSGQS MGYFDIPVDH VYCQPVILDY LASKSISSED LVVVSPDVGG VARARAFAKK LSDAPLAIVD KRRHGHNVAE VMNLIGDVKG
301: KVAVMVDDII DTAGTIVKGA ALLHEEGARE VYACCTHAVF SPPAIERLSS GLLQEVIVTN TLPVAEKNYF PQLTILSVAN LLGETIWRVH DDSSVSSIFL

Arabidopsis Description

PRS2Ribose-phosphate pyrophosphokinase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42583]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.