Factsheet for Zm00001d046742_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

plastid: 22065420
plastid: 23198870

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90051	Sorghum	plastid	88.64	87.97
TraesCS7B01G302600.1	Wheat	plastid	81.82	81.2
TraesCS7D01G396300.1	Wheat	plastid	82.07	81.05
TraesCS7A01G402500.1	Wheat	plastid	81.06	80.25
HORVU7Hr1G094240.2	Barley	plastid	80.56	79.75
Os06t0617800-01	Rice	plastid	62.37	63.82
GSMUA_Achr3P03780_001	Banana	endoplasmic reticulum, vacuole	60.35	63.4
Zm00001d015115_P001	Maize	plastid	62.63	62.16
Zm00001d027256_P001	Maize	cytosol, mitochondrion	39.14	45.86
Zm00001d017833_P001	Maize	cytosol, extracellular, mitochondrion	18.69	22.77
Zm00001d051634_P001	Maize	cytosol	17.93	21.85
Zm00001d043600_P001	Maize	plastid	15.15	16.76

Protein Annotations

KEGG:00030+2.7.6.1	KEGG:00230+2.7.6.1	EntrezGene:100279628	Gene3D:3.40.50.2020	MapMan:50.2.7	ProteinID:AQL04965.1
UniProt:B7ZZ73	EMBL:BT054615	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004749
GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009116
GO:GO:0009156	GO:GO:0009165	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0044249	HAMAP:MF_00583_B	PFAM:PF13793	PFAM:PF14572	InterPro:PRTase-like	InterPro:PRibTrfase_dom
InterPro:PRib_PP_synth_CS	ScanProsite:PS00114	PANTHER:PTHR10210	PANTHER:PTHR10210:SF52	InterPro:Pribosyltran_N	InterPro:Rib-P_diPkinase
InterPro:Rib-P_diPkinase_bac	SMART:SM01400	SUPFAM:SSF53271	TIGRFAMs:TIGR01251	UniParc:UPI00019172EA	EnsemblPlantsGene:Zm00001d046742
EnsemblPlants:Zm00001d046742_P002	EnsemblPlants:Zm00001d046742_T002	SEG:seg	:	:	:

Description

Ribose-phosphate pyrophosphokinase

Coordinates

chr9:+:104063170..104067761

Molecular Weight (calculated)

42844.9 Da

IEP (calculated)

8.559

GRAVY (calculated)

0.100

Length

396 amino acids

Sequence
(BLAST)

001: MAATAAVAGT GSSLSSRRSR SVVSSSFRAA ASRFRSPRCV LGSEQLRVAH EGKRMSGAES RTAWAPKVPA PESRLAALPR ELRDSRMKIF SGTANRPLAQ
101: EIAAYLGIEL GKILIKRFAD GEIYVQLQES VRGCDVFLIQ PTCSPVNENL MELFIMIDAC RRASARSITV VIPYFGYARA DRKAQGREPI TAKLAANLLT
201: EAGSDRVIVC DIHSTQALGY FDIPVDHIYG QPVILDYLAS KTISEDLVVV SPDVGGVVRA RAFAKKLLNA RLAIVDKRRQ GHNMSEVMNL IGDVKGKVAI
301: LIDDMIDTAG TITSAAALLK QEGAEAVYAC CTHAVFSPPA IERLSGGVFE EVIVTNSILL PEDKCFPQLT VLSMANLVGE TIWHVHRDGS VSSIFQ

Best Arabidopsis Sequence Match ( AT2G35390.2 )
(BLAST)

001: MASLGLSFPP AAKTPTYLAS SSSTFFSNSS LSVRTSQFRS RNSVFACVKC DMPESLNVGN GNPSIPIINE RTLPKFLESA RMEKSVNRTN TRLKLFSGTA
101: NPALAQEIAW YMGLDLGKVN IKRFADGEIY VQLQESVRGC DVYLVQPTCT PTNENLMELL IMVDACRRAS AKKVTAVIPY FGYARADRKT QGRESIAAKL
201: VANLITEAGA DRVLACDLHS GQSMGYFDIP VDHVYCQPVI LDYLASKSIP SEDLVVVSPD VGGVARARAF AKKLSDAPLA IVDKRRSGHN VAEVMNLIGD
301: VRGKVAIMVD DMIDTAGTIV KGAALLHQEG AREVYACCTH AVFSPPAIER LSGGLLQEVI VTNTLPVAEK NYFPQLTILS VANLLGETIW RVHDDSSVSS
401: IFL

Arabidopsis Description

PRS1Ribose-phosphate pyrophosphokinase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42581]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.