CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046742_P002	Maize	plastid	87.97	88.64
TraesCS7B01G302600.1	Wheat	plastid	84.96	84.96
TraesCS7D01G396300.1	Wheat	plastid	83.21	82.79
HORVU7Hr1G094240.2	Barley	plastid	82.96	82.75
TraesCS7A01G402500.1	Wheat	plastid	82.96	82.75
Os06t0617800-01	Rice	plastid	62.91	64.86
GSMUA_Achr3P03780_001	Banana	endoplasmic reticulum, vacuole	59.15	62.6
EES06216	Sorghum	plastid	62.16	62.31
OQU93498	Sorghum	plastid	60.4	61.17
EES07369	Sorghum	cytosol	18.05	21.69
EES01390	Sorghum	plastid	19.05	18.67

Protein Annotations

KEGG:00030+2.7.6.1	KEGG:00230+2.7.6.1	Gene3D:3.40.50.2020	MapMan:50.2.7	EntrezGene:8083460	UniProt:C5Z650
EnsemblPlants:EER90051	ProteinID:EER90051	ProteinID:EER90051.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004749	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009116	GO:GO:0009156	GO:GO:0009165	GO:GO:0009987	GO:GO:0016740	GO:GO:0044249
HAMAP:MF_00583_B	PFAM:PF13793	PFAM:PF14572	InterPro:PRTase-like	InterPro:PRibTrfase_dom	InterPro:PRib_PP_synth_CS
ScanProsite:PS00114	PANTHER:PTHR10210	PANTHER:PTHR10210:SF52	InterPro:Pribosyltran_N	InterPro:Rib-P_diPkinase	InterPro:Rib-P_diPkinase_bac
SMART:SM01400	EnsemblPlantsGene:SORBI_3010G193600	SUPFAM:SSF53271	TIGRFAMs:TIGR01251	UniParc:UPI0001A899DF	RefSeq:XP_002438684.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:53584210..53588167

Molecular Weight (calculated)

42951.0 Da

IEP (calculated)

8.656

GRAVY (calculated)

0.080

Length

399 amino acids

Sequence
(BLAST)

001: MAATAAASGT GSSFLSPRRS RSAASSTVRA AASRFRSPRS VLGSEQLRVA QEGKRMGGAA EPRAAVWTPK APAPEARLAA LPREPRDSRM KIFSGTANRP
101: LAQEIAAYLG VDLGKILIKR FADGEIYVQL QESVRGCDVF LIQPTCSPVN ENLMELFIMI DACRRASARS ITVVIPYFGY ARADRKAQGR EPITAKLAAN
201: LLTEAGSDRV IVCDIHSTQA LGYFDIPVDH IYGQPVILDY LASKTISEDL VVVSPDVGGV VRARAFAKKL LNARLAIVDK RRQGHNMSEV MNLIGDVKGK
301: VAILIDDMID TAGTITSAAA LLKQEGAEAV YACCTHAVFS PPAIERLSGG VFEEVIVTNS ILLPEDKCFP QLTVLSMANL VAETIWHVHR DGSVSSIFQ

Best Arabidopsis Sequence Match ( AT2G35390.2 )
(BLAST)

001: MASLGLSFPP AAKTPTYLAS SSSTFFSNSS LSVRTSQFRS RNSVFACVKC DMPESLNVGN GNPSIPIINE RTLPKFLESA RMEKSVNRTN TRLKLFSGTA
101: NPALAQEIAW YMGLDLGKVN IKRFADGEIY VQLQESVRGC DVYLVQPTCT PTNENLMELL IMVDACRRAS AKKVTAVIPY FGYARADRKT QGRESIAAKL
201: VANLITEAGA DRVLACDLHS GQSMGYFDIP VDHVYCQPVI LDYLASKSIP SEDLVVVSPD VGGVARARAF AKKLSDAPLA IVDKRRSGHN VAEVMNLIGD
301: VRGKVAIMVD DMIDTAGTIV KGAALLHQEG AREVYACCTH AVFSPPAIER LSGGLLQEVI VTNTLPVAEK NYFPQLTILS VANLLGETIW RVHDDSSVSS
401: IFL

Arabidopsis Description

PRS1Ribose-phosphate pyrophosphokinase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42581]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.