CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015115_P001	Maize	plastid	95.23	94.99
Os02t0127700-02	Rice	plastid	91.96	92.42
HORVU6Hr1G015080.5	Barley	mitochondrion	84.42	89.84
TraesCS6A01G088200.2	Wheat	nucleus	89.2	88.09
TraesCS6B01G110600.1	Wheat	plastid	88.94	87.62
TraesCSU01G018200.1	Wheat	plastid	88.69	87.59
Solyc10g024410.1.1	Tomato	cytosol, nucleus	63.82	87.59
GSMUA_Achr2P12090_001	Banana	cytosol, mitochondrion	67.34	80.72
CDY68772	Canola	endoplasmic reticulum, golgi	64.32	77.11
KRH48933	Soybean	plastid	76.38	75.62
KRH66354	Soybean	nucleus	76.63	75.5
VIT_15s0021g00460.t01	Wine grape	plastid	75.38	74.44
AT2G44530.1	Thale cress	plastid	72.11	72.84
CDY30476	Canola	plastid	73.37	72.82
KRH57590	Soybean	nucleus	71.86	72.77
CDY23440	Canola	plastid	70.1	72.66
PGSC0003DMT400056411	Potato	plastid	72.11	72.47
OQU93498	Sorghum	plastid	70.85	71.57
VIT_02s0012g00530.t01	Wine grape	plastid	71.36	71.54
PGSC0003DMT400062265	Potato	plastid	71.11	71.28
Solyc08g077200.2.1	Tomato	plastid	70.85	71.03
Bra037645.1-P	Field mustard	plastid	73.37	70.53
KRH04308	Soybean	plastid	71.36	69.95
Bra023263.1-P	Field mustard	plastid	69.1	69.62
AT2G35390.2	Thale cress	plastid	70.35	69.48
CDY31684	Canola	plastid	69.6	69.42
CDX84209	Canola	plastid	69.6	69.42
Bra005344.1-P	Field mustard	plastid	69.6	69.42
CDY01279	Canola	plastid	69.1	69.27
CDX93837	Canola	plastid	68.84	69.02
AT1G32380.1	Thale cress	plastid	69.1	68.75
CDY32299	Canola	plastid	69.1	67.73
PGSC0003DMT400068395	Potato	plastid	67.59	67.25
Solyc06g061040.2.1	Tomato	plastid	67.34	66.5
EER90051	Sorghum	plastid	62.31	62.16
Bra010159.1-P	Field mustard	plastid	28.64	50.0
EES07369	Sorghum	cytosol	18.09	21.69
EES01390	Sorghum	plastid	18.34	17.94

Protein Annotations

KEGG:00030+2.7.6.1	KEGG:00230+2.7.6.1	Gene3D:3.40.50.2020	MapMan:50.2.7	EntrezGene:8055076	UniProt:C5XTQ8
EnsemblPlants:EES06216	ProteinID:EES06216	ProteinID:EES06216.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004749	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009116	GO:GO:0009156
GO:GO:0009165	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	GO:GO:0044249	HAMAP:MF_00583_B
PFAM:PF13793	PFAM:PF14572	InterPro:PRTase-like	InterPro:PRibTrfase_dom	InterPro:PRib_PP_synth_CS	ScanProsite:PS00114
PANTHER:PTHR10210	PANTHER:PTHR10210:SF86	InterPro:Pribosyltran_N	InterPro:Rib-P_diPkinase	InterPro:Rib-P_diPkinase_bac	SMART:SM01400
EnsemblPlantsGene:SORBI_3004G025800	SUPFAM:SSF53271	unigene:Sbi.14564	TIGRFAMs:TIGR01251	UniParc:UPI0001A85F7D	RefSeq:XP_002453240.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:2057796..2063320

Molecular Weight (calculated)

42942.1 Da

IEP (calculated)

7.355

GRAVY (calculated)

0.071

Length

398 amino acids

Sequence
(BLAST)

001: MPLCCSPTSA AAAAAASPGV ARSGGLLRRS RPVPGVVRCK KIDSLRAING ALPCIPVSDR SLLTPVNLPV FRDPNMRNDT RLRIFSGTAN PSLSQEIASY
101: LGLELGKINI KRFADGEIYV QLQESVRGCD VFLVQPSCPP ANENLMELLI MIDACRRASA KNITAVIPYF GYARADRKSQ GRESIAAKLV ANMITEAGAN
201: RVLVCDLHSS QAMGYFDIPV DHVYGQPVIL DYLASKTICS NDLVVVSPDV GGVARARAFA KKLSDAPLAI VDKRRQGHNV AEVMNLIGDV RGKVAVMMDD
301: MIDTAGTIAK GAELLHQEGA REVYACCTHA VFSPPAIERL SSGLFQEVII TNTIPLKEEK TFPQLTILSV ANLLGETIWR VHDDCSVGHE PYSSLDID

Best Arabidopsis Sequence Match ( AT2G44530.2 )
(BLAST)

001: MASIVQPSPT FPALNLRRSS LIRPPSSVRF PLCNAADPYK FDGGNSAGFH LLTGDTVPAS FSRTRLEDSI YQNTTRLRIF SGTANPILAQ EISCYLGLDL
101: GKIKIKRFAD GEIYVQLQES VRGCDVFLVQ PTCPPANENL MELLVMIDAC RRASAKTITA VIPYFGYARA DRKTQGRESI AAKLVANLIT QSGADRVLAC
201: DLHSGQSMGY FDIPVDHVYG QPVILDYLAS KAISSEDLVV VSPDVGGVAR ARAFAKKLSD APLAIVDKRR HGHNVAEVMN LIGDVKGKVA IMVDDMIDTA
301: GTISKGAALL HQEGAREVYA CTTHAVFSPP AISRLSSGLF QEVIITNTIP LSEKNYFPQL TVLSVANLLG ETIWRVHDDC SGAIEPFSTL GID

Arabidopsis Description

PRS5Ribose-phosphate pyrophosphokinase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64888]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.