CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30476	Canola	plastid	98.96	94.76
Bra037645.1-P	Field mustard	plastid	98.96	91.79
Solyc10g024410.1.1	Tomato	cytosol, nucleus	64.32	85.17
AT2G44530.1	Thale cress	plastid	84.9	82.74
GSMUA_Achr11P...	Banana	cytosol, plastid	71.61	81.6
GSMUA_Achr2P12090_001	Banana	cytosol, mitochondrion	68.75	79.52
KRH48933	Soybean	plastid	79.43	75.87
KRH66354	Soybean	nucleus	79.43	75.5
CDY68772	Canola	endoplasmic reticulum, golgi	64.32	74.4
HORVU6Hr1G015080.5	Barley	mitochondrion	72.14	74.06
VIT_15s0021g00460.t01	Wine grape	plastid	75.78	72.21
Os02t0127700-02	Rice	plastid	73.96	71.72
Zm00001d015115_P001	Maize	plastid	72.92	70.18
EES06216	Sorghum	plastid	72.66	70.1
PGSC0003DMT400056411	Potato	plastid	72.14	69.95
TraesCS6B01G110600.1	Wheat	plastid	73.18	69.55
TraesCS6A01G088200.2	Wheat	nucleus	72.92	69.48
TraesCSU01G018200.1	Wheat	plastid	72.4	68.98
CDY01279	Canola	plastid	70.05	67.76
CDX93837	Canola	plastid	70.05	67.76
CDX84209	Canola	plastid	69.79	67.17
CDY31684	Canola	plastid	69.79	67.17
CDY32299	Canola	plastid	70.57	66.75
CDY60199	Canola	cytosol	17.19	19.35
CDX83511	Canola	cytosol	17.19	19.3
CDX79840	Canola	cytosol	17.19	19.24
CDY42811	Canola	cytosol	15.1	18.77
CDY19314	Canola	plastid	19.79	18.45
CDX97905	Canola	plastid	19.53	18.34

Protein Annotations

KEGG:00030+2.7.6.1	KEGG:00230+2.7.6.1	Gene3D:3.40.50.2020	MapMan:50.2.7	GO:A0A078GAH6	UniProt:A0A078GAH6
EnsemblPlants:CDY23440	ProteinID:CDY23440	ProteinID:CDY23440.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004749	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009116	GO:GO:0009156	GO:GO:0009165	GO:GO:0009987	GO:GO:0016740	GO:GO:0044249
EnsemblPlantsGene:GSBRNA2T00022052001	PFAM:PF13793	PFAM:PF14572	InterPro:PRTase-like	InterPro:PRibTrfase_dom	InterPro:PRib_PP_synth_CS
ScanProsite:PS00114	PANTHER:PTHR10210	PANTHER:PTHR10210:SF86	InterPro:Pribosyltran_N	InterPro:Rib-P_diPkinase	SMART:SM01400
SUPFAM:SSF53271	TIGRFAMs:TIGR01251	UniPathway:UPA00087	UniParc:UPI0004EE157A	SEG:seg	:

Description

BnaC04g49680DBnaC04g49680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GAH6]

Coordinates

chrLK032143:+:468089..470497

Molecular Weight (calculated)

41350.7 Da

IEP (calculated)

6.179

GRAVY (calculated)

0.058

Length

384 amino acids

Sequence
(BLAST)

001: MAFLLHAQPS HSLPAADLRR PSPLIHRGPA SVRFPLRCKA VDSYGGNSDD LYLLTGDTAP ASALLSRTRL EDAIKNNTTR LRIFSGTANP SLAQEISCYL
101: GLELGKIKIK RFADGEIYVQ LQESVRGCDV FLVQPTCPPA NENLMELLVM IDACRRASAK TITATQGRES IAAKLVANLI TESGADRVLA CDLHSGQSMG
201: YFDIPVDHVY GQPVILDYLA SKGISSDDLV VVSPDVGGVA RARAFAKKLS DAPLAIVDKR RHGHNVAEVM NLIGDVKGKV AIMVDDMIDT AGTISKGAAL
301: LHQEGAREVY ACTTHAVFSP PAISRLSSGL FQEVIITNTI PLSEQNYFPQ LTVLSVANLL AETIWRVHDD CSGDIEPFST LGID

Best Arabidopsis Sequence Match ( AT2G44530.1 )
(BLAST)

001: MASIVQPSPT FPALNLRRSS LIRPPSSVRF PLKCNAADPY KFDGGNSAGF HLLTGDTVPA SFSRTRLEDS IYQNTTRLRI FSGTANPILA QEISCYLGLD
101: LGKIKIKRFA DGEIYVQLQE SVRGCDVFLV QPTCPPANEN LMELLVMIDA CRRASAKTIT AVIPYFGYAR ADRKTQGRES IAAKLVANLI TQSGADRVLA
201: CDLHSGQSMG YFDIPVDHVY GQPVILDYLA SKAISSEDLV VVSPDVGGVA RARAFAKKLS DAPLAIVDKR RHGHNVAEVM NLIGDVKGKV AIMVDDMIDT
301: AGTISKGAAL LHQEGAREVY ACTTHAVFSP PAISRLSSGL FQEVIITNTI PLSEKNYFPQ LTVLSVANLL GETIWRVHDD CSGAIEPFST LGID

Arabidopsis Description

PRS5Ribose-phosphate pyrophosphokinase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64888]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.