Factsheet for PGSC0003DMT400056411

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 2
plastid 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g024410.1.1	Tomato	cytosol, nucleus	69.95	95.52
GSMUA_Achr11P...	Banana	cytosol, plastid	72.73	85.46
GSMUA_Achr2P12090_001	Banana	cytosol, mitochondrion	68.94	82.23
HORVU6Hr1G015080.5	Barley	mitochondrion	72.73	77.01
VIT_15s0021g00460.t01	Wine grape	plastid	77.27	75.93
KRH66354	Soybean	nucleus	76.77	75.25
KRH48933	Soybean	plastid	76.26	75.12
Os02t0127700-02	Rice	plastid	73.23	73.23
AT2G44530.1	Thale cress	plastid	71.97	72.33
CDY23440	Canola	plastid	69.95	72.14
EES06216	Sorghum	plastid	72.47	72.11
CDY30476	Canola	plastid	72.47	71.57
PGSC0003DMT400062265	Potato	plastid	71.72	71.54
TraesCS6A01G088200.2	Wheat	nucleus	72.47	71.22
Zm00001d015115_P001	Maize	plastid	71.72	71.18
TraesCS6B01G110600.1	Wheat	plastid	72.47	71.04
TraesCSU01G018200.1	Wheat	plastid	71.97	70.72
Bra037645.1-P	Field mustard	plastid	72.47	69.32
PGSC0003DMT400068395	Potato	plastid	68.18	67.5
PGSC0003DMT400044713	Potato	cytosol	18.69	23.12
PGSC0003DMT400054829	Potato	cytosol	17.93	22.47
PGSC0003DMT400035565	Potato	cytosol	5.56	17.32

Protein Annotations

KEGG:00030+2.7.6.1	KEGG:00230+2.7.6.1	EntrezGene:102586346	Gene3D:3.40.50.2020	MapMan:50.2.7	GO:GO:0000287
GO:GO:0003674	GO:GO:0003824	GO:GO:0004749	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009116	GO:GO:0009156	GO:GO:0009165	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740
GO:GO:0044249	UniProt:M1BZE8	HAMAP:MF_00583_B	PFAM:PF13793	PFAM:PF14572	EnsemblPlantsGene:PGSC0003DMG402021921
PGSC:PGSC0003DMG402021921	EnsemblPlants:PGSC0003DMT400056411	InterPro:PRTase-like	InterPro:PRibTrfase_dom	InterPro:PRib_PP_synth_CS	ScanProsite:PS00114
PANTHER:PTHR10210	PANTHER:PTHR10210:SF86	InterPro:Pribosyltran_N	InterPro:Rib-P_diPkinase	InterPro:Rib-P_diPkinase_bac	SMART:SM01400
SUPFAM:SSF53271	TIGRFAMs:TIGR01251	UniParc:UPI000294DED9	RefSeq:XP_006341335.1	:	:

Description

Ribose-phosphate pyrophosphokinase [Source:PGSC_GENE;Acc:PGSC0003DMG402021921]

Coordinates

chr10:+:37274752..37280680

Molecular Weight (calculated)

42834.6 Da

IEP (calculated)

6.578

GRAVY (calculated)

0.010

Length

396 amino acids

Sequence
(BLAST)

001: MTSLALPGSF LDVNKTCHGR HAARNSIIRC NVAEPLMFSK ENGRPGMPLQ VNGDPSFTNL LNANQLRRFP VAHGHNDTRL RIFSGTANPA LSQEIASNMG
101: LELGKIMIKR FADGEIYVQL QESVRGCDVY LVQPTCPPAN ENLMELLIMI DACRRASAKN ITAVVPYFGY ARADRKTQGR ESIAAKLVAN LITEAGADRV
201: LACDLHSGQS MGYFDIPVDH VPGQPVILDY LASKTICSDD LVVVSPDVGG VARARAFAKK LSDAPLAIVD KRRHGHNVAE VMNLIGDVRG KVAVMVDDMI
301: DTAGTIAKGA ALLHQEGARE VYACTTHAVF SPPAIERLSS GLFQEVIITN TIPVAEQNYF PQLTILSVAN LLGETIWRVH DDCAGGFEPY SSLGID

Best Arabidopsis Sequence Match ( AT2G44530.1 )
(BLAST)

001: MASIVQPSPT FPALNLRRSS LIRPPSSVRF PLKCNAADPY KFDGGNSAGF HLLTGDTVPA SFSRTRLEDS IYQNTTRLRI FSGTANPILA QEISCYLGLD
101: LGKIKIKRFA DGEIYVQLQE SVRGCDVFLV QPTCPPANEN LMELLVMIDA CRRASAKTIT AVIPYFGYAR ADRKTQGRES IAAKLVANLI TQSGADRVLA
201: CDLHSGQSMG YFDIPVDHVY GQPVILDYLA SKAISSEDLV VVSPDVGGVA RARAFAKKLS DAPLAIVDKR RHGHNVAEVM NLIGDVKGKV AIMVDDMIDT
301: AGTISKGAAL LHQEGAREVY ACTTHAVFSP PAISRLSSGL FQEVIITNTI PLSEKNYFPQ LTVLSVANLL GETIWRVHDD CSGAIEPFST LGID

Arabidopsis Description

PRS5Ribose-phosphate pyrophosphokinase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64888]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.