Factsheet for PGSC0003DMT400062265

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g077200.2.1	Tomato	plastid	99.5	99.5
GSMUA_Achr11P...	Banana	cytosol, plastid	71.79	84.57
GSMUA_Achr2P12090_001	Banana	cytosol, mitochondrion	69.02	82.53
CDY68772	Canola	endoplasmic reticulum, golgi	67.25	80.42
KRH57590	Soybean	nucleus	79.09	79.9
AT1G32380.1	Thale cress	plastid	79.6	79.0
Bra023263.1-P	Field mustard	plastid	78.59	78.99
CDY01279	Canola	plastid	78.59	78.59
VIT_02s0012g00530.t01	Wine grape	plastid	78.34	78.34
CDX93837	Canola	plastid	78.34	78.34
CDY31684	Canola	plastid	78.34	77.94
AT2G35390.2	Thale cress	plastid	79.09	77.92
CDX84209	Canola	plastid	78.09	77.69
Bra005344.1-P	Field mustard	plastid	78.09	77.69
KRH04308	Soybean	plastid	78.84	77.09
CDY32299	Canola	plastid	78.34	76.6
HORVU6Hr1G015080.5	Barley	mitochondrion	71.54	75.94
PGSC0003DMT400068395	Potato	plastid	74.06	73.5
Os02t0127700-02	Rice	plastid	72.29	72.47
PGSC0003DMT400056411	Potato	plastid	71.54	71.72
Zm00001d015115_P001	Maize	plastid	71.79	71.43
TraesCS6A01G088200.2	Wheat	nucleus	72.29	71.22
TraesCSU01G018200.1	Wheat	plastid	72.29	71.22
EES06216	Sorghum	plastid	71.28	71.11
TraesCS6B01G110600.1	Wheat	plastid	72.29	71.04
Bra010159.1-P	Field mustard	plastid	27.96	48.68
PGSC0003DMT400044713	Potato	cytosol	18.64	23.12
PGSC0003DMT400054829	Potato	cytosol	18.14	22.78
PGSC0003DMT400035565	Potato	cytosol	6.05	18.9

Protein Annotations

KEGG:00030+2.7.6.1	KEGG:00230+2.7.6.1	EntrezGene:102597996	Gene3D:3.40.50.2020	MapMan:50.2.7	GO:GO:0000287
GO:GO:0003674	GO:GO:0003824	GO:GO:0004749	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009116	GO:GO:0009156	GO:GO:0009165	GO:GO:0009987
GO:GO:0016740	GO:GO:0044249	UniProt:M1C8T2	HAMAP:MF_00583_B	PFAM:PF13793	PFAM:PF14572
EnsemblPlantsGene:PGSC0003DMG400024226	PGSC:PGSC0003DMG400024226	EnsemblPlants:PGSC0003DMT400062265	InterPro:PRTase-like	InterPro:PRibTrfase_dom	InterPro:PRib_PP_synth_CS
ScanProsite:PS00114	PANTHER:PTHR10210	PANTHER:PTHR10210:SF54	InterPro:Pribosyltran_N	InterPro:Rib-P_diPkinase	InterPro:Rib-P_diPkinase_bac
SMART:SM01400	SUPFAM:SSF53271	TIGRFAMs:TIGR01251	UniParc:UPI000296FC69	RefSeq:XP_006358575.1	SEG:seg

Description

Ribose-phosphate pyrophosphokinase 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400024226]

Coordinates

chr8:+:49997124..50004083

Molecular Weight (calculated)

43167.0 Da

IEP (calculated)

8.401

GRAVY (calculated)

0.013

Length

397 amino acids

Sequence
(BLAST)

001: MASSLVLPSP SSASTSYSTP LFSSSRSFLT HKSFVPKRTR LRTSVNCEIS EPVNGKPRVP IINDGTLPKF LQASRLQNSV SRNNNRLKIF TGTANPSLSQ
101: EIAWYMGFEL GKVKIKRFAD GEIYVQLQES VRGCDVYLVQ STCPPANENL MELLVMIDAC RRASAKTITA VIPYFGYARA DRKTQGRESI GAKLVANLIT
201: EAGADRVLAC DLHSGQSMGY FDIPVDHVYC QPVVLDYLAS KKISSDDLVV VSPDVGGVAR ARAFAKKLSD APLAIVDKRR HGHNVAEVMN LIGDVKGKVA
301: VMVDDMIDTA GTIAKGAALL HQEGAREVYA CCTHAVFSPP AIERLSSGLF QEVIVTNTIP AIEKNCFPQL TVLSVANLLG ETIWRVHDDC SVSSIFQ

Best Arabidopsis Sequence Match ( AT1G32380.1 )
(BLAST)

001: MASLALTSPP SVKIPSYLSS SSSSLFSRSS ISFRTTESRS RICVSGYAKC NLPKALNGNA RVPIINETTI PKFFDSSRLE KSVSRNNTKL KLFSGTANPA
101: LSQEIAWYMG LELGKVSIKR FADGEIYVQL KESVRGCDVF LVQPTCTPTN ENLMELLIMV DACRRASAKK VTAVIPYFGY ARADRKTQGR ESIAAKLVAN
201: LITEAGADRV LACDLHSGQS MGYFDIPVDH VYCQPVILDY LASKSISSED LVVVSPDVGG VARARAFAKK LSDAPLAIVD KRRHGHNVAE VMNLIGDVKG
301: KVAVMVDDII DTAGTIVKGA ALLHEEGARE VYACCTHAVF SPPAIERLSS GLLQEVIVTN TLPVAEKNYF PQLTILSVAN LLGETIWRVH DDSSVSSIFL

Arabidopsis Description

PRS2Ribose-phosphate pyrophosphokinase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42583]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.