Factsheet for Bra023263.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra010996.1-P
Bra012474.1-P
Bra024741.1-P
Bra035030.1-P
Bra039992.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32380.1	Bra010996.1-P	AT1G25490.1	21798944
AT1G32380.1	Bra012474.1-P	AT1G25490.1	21798944
AT1G32380.1	Bra024741.1-P	AT1G25490.1	21798944
AT1G32380.1	Bra035030.1-P	AT1G25490.1	21798944
AT1G32380.1	Bra039992.1-P	AT1G25490.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93837	Canola	plastid	99.24	98.74
AT1G32380.1	Thale cress	plastid	95.7	94.5
Bra005344.1-P	Field mustard	plastid	87.09	86.22
GSMUA_Achr11P...	Banana	cytosol, plastid	69.37	81.31
GSMUA_Achr2P12090_001	Banana	cytosol, mitochondrion	67.34	80.12
KRH57590	Soybean	nucleus	78.48	78.88
Solyc08g077200.2.1	Tomato	plastid	79.24	78.84
PGSC0003DMT400062265	Potato	plastid	78.99	78.59
KRH04308	Soybean	plastid	77.72	75.62
VIT_02s0012g00530.t01	Wine grape	plastid	75.95	75.57
HORVU6Hr1G015080.5	Barley	mitochondrion	69.87	73.8
Os02t0127700-02	Rice	plastid	70.63	70.45
PGSC0003DMT400068395	Potato	plastid	70.89	70.0
Solyc06g061040.2.1	Tomato	plastid	71.39	69.98
Zm00001d015115_P001	Maize	plastid	70.13	69.42
EES06216	Sorghum	plastid	69.62	69.1
Bra037645.1-P	Field mustard	plastid	71.9	68.6
TraesCS6A01G088200.2	Wheat	nucleus	69.87	68.49
TraesCS6B01G110600.1	Wheat	plastid	69.87	68.32
TraesCSU01G018200.1	Wheat	plastid	69.37	67.99
Bra010159.1-P	Field mustard	plastid	30.13	52.19
Bra000280.1-P	Field mustard	cytosol	18.99	22.19
Bra004730.1-P	Field mustard	cytosol	18.73	21.57
Bra019905.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	16.2	13.17

Protein Annotations

KEGG:00030+2.7.6.1	KEGG:00230+2.7.6.1	Gene3D:3.40.50.2020	MapMan:50.2.7	EnsemblPlantsGene:Bra023263	EnsemblPlants:Bra023263.1
EnsemblPlants:Bra023263.1-P	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004749	GO:GO:0005488
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009116	GO:GO:0009156
GO:GO:0009165	GO:GO:0009987	GO:GO:0016740	GO:GO:0044249	UniProt:M4E3B2	HAMAP:MF_00583_B
PFAM:PF13793	PFAM:PF14572	InterPro:PRTase-like	InterPro:PRibTrfase_dom	InterPro:PRib_PP_synth_CS	ScanProsite:PS00114
PANTHER:PTHR10210	PANTHER:PTHR10210:SF54	InterPro:Pribosyltran_N	InterPro:Rib-P_diPkinase	InterPro:Rib-P_diPkinase_bac	SMART:SM01400
SUPFAM:SSF53271	TIGRFAMs:TIGR01251	UniParc:UPI00025422D9	SEG:seg	:	:

Description

AT1G32380 (E=6e-204) | ribose-phosphate pyrophosphokinase 2 / phosphoribosyl diphosphate synthetase 2 (PRS2)

Coordinates

chrA09:-:20121462..20123510

Molecular Weight (calculated)

42774.7 Da

IEP (calculated)

8.462

GRAVY (calculated)

0.088

Length

395 amino acids

Sequence
(BLAST)

001: MASMALTSPP GVKIPSYMAA SSSSSLFSRS SISFRTVESR SRFCVSAKCN LNGNARIPII NETTLPKYFD SSRLEKSASR ANTKLKLFSG TANPALSQEI
101: AWYMGLELGK ISIKRFADGE VYVQLKESVR GCDVFLVQPT CTPTNENLME LLIMVDACRR ASAKKVTAVI PYFGYARADR KTQGRESIAA KLVANLITEA
201: GADRVLACDL HSGQSMGYFD IPVDHVYCQP VILDYLASKS ISSKDLVVVS PDVGGVARAR AFAKKLSDAP LAIVDKRRHG HNVAEVMNLI GDVKGKVAVM
301: VDDMIDTAGT IVKGAALLHE EGAREVYACC THAVFSPPAI ERLSSGLLQE VIVTNTLPVA EKNYFPQLTI LSVANLLGET IWRVHDDSSV SSIFL

Best Arabidopsis Sequence Match ( AT1G32380.1 )
(BLAST)

001: MASLALTSPP SVKIPSYLSS SSSSLFSRSS ISFRTTESRS RICVSGYAKC NLPKALNGNA RVPIINETTI PKFFDSSRLE KSVSRNNTKL KLFSGTANPA
101: LSQEIAWYMG LELGKVSIKR FADGEIYVQL KESVRGCDVF LVQPTCTPTN ENLMELLIMV DACRRASAKK VTAVIPYFGY ARADRKTQGR ESIAAKLVAN
201: LITEAGADRV LACDLHSGQS MGYFDIPVDH VYCQPVILDY LASKSISSED LVVVSPDVGG VARARAFAKK LSDAPLAIVD KRRHGHNVAE VMNLIGDVKG
301: KVAVMVDDII DTAGTIVKGA ALLHEEGARE VYACCTHAVF SPPAIERLSS GLLQEVIVTN TLPVAEKNYF PQLTILSVAN LLGETIWRVH DDSSVSSIFL

Arabidopsis Description

PRS2Ribose-phosphate pyrophosphokinase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42583]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.