Factsheet for Bra019905.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, nucleus, cytosol

Predictor Summary:

plastid 2
endoplasmic reticulum 1
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P14200_001	Banana	cytosol	42.8	68.65
CDX97905	Canola	plastid	54.32	64.55
CDY19314	Canola	plastid	53.91	63.59
PGSC0003DMT400035565	Potato	cytosol	16.46	62.99
HORVU3Hr1G068700.3	Barley	cytosol	42.8	62.84
AT1G10700.1	Thale cress	plastid	53.09	62.77
Bra000280.1-P	Field mustard	cytosol	40.12	57.69
VIT_00s0225g00140.t01	Wine grape	plastid	46.3	57.25
Bra004730.1-P	Field mustard	cytosol	40.33	57.14
Solyc04g039620.2.1	Tomato	plastid	37.65	56.48
KRH74537	Soybean	endoplasmic reticulum, plastid	45.06	53.68
KRH69621	Soybean	plastid	44.65	53.19
Solyc04g039650.2.1	Tomato	plastid	8.64	53.16
EES01390	Sorghum	plastid	43.83	52.33
Os01t0723600-01	Rice	plastid	43.83	52.08
TraesCS3A01G285700.1	Wheat	plastid	43.0	51.35
TraesCS3B01G319600.1	Wheat	plastid	43.0	51.35
TraesCS3D01G285500.2	Wheat	plastid	43.0	51.35
Zm00001d043600_P001	Maize	plastid	30.25	41.06
Bra037645.1-P	Field mustard	plastid	13.99	16.43
Bra023263.1-P	Field mustard	plastid	13.17	16.2
Bra005344.1-P	Field mustard	plastid	12.96	15.79
Bra010159.1-P	Field mustard	plastid	6.17	13.16

Protein Annotations

MapMan:15.5.35	Gene3D:3.40.50.2020	MapMan:4.1.1.2.1	InterPro:BSD_dom	EnsemblPlantsGene:Bra019905	EnsemblPlants:Bra019905.1
EnsemblPlants:Bra019905.1-P	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004749	GO:GO:0005488
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009116	GO:GO:0009165
GO:GO:0009987	GO:GO:0016740	InterPro:IPR005607	UniProt:M4DTR2	PFAM:PF00156	PFAM:PF03909
InterPro:PRTase-like	InterPro:PRibTrfase_dom	PFscan:PS50858	PANTHER:PTHR10210	PANTHER:PTHR10210:SF45	SMART:SM00751
SMART:SM01400	SUPFAM:SSF140383	SUPFAM:SSF53271	UniParc:UPI000253EA95	SEG:seg	:

Description

AT1G10700 (E=4e-129) | ribose-phosphate pyrophosphokinase 3 / phosphoribosyl diphosphate synthetase 3 (PRS3)

Coordinates

chrA06:+:3791208..3794264

Molecular Weight (calculated)

54439.5 Da

IEP (calculated)

5.350

GRAVY (calculated)

-0.275

Length

486 amino acids

Sequence
(BLAST)

001: MAASASESGS KCSKRVCLFH SDETRDLAER IVAQSDCIEL RSINWNSPAV IFEQLSVIYA LPKLFVSSFT LVLPFFPTGT SERMEDEGDV ATAFTLARIL
101: SNIPASRGGP TSLVTFDIHA LQERFYFGDT ILPCFESGIP LLKNRLQALP DSDNISIAFP DDGAWKRFHK QLQHYPTIVC NKVRMGDKRI VRIKEGDAEG
201: RHVVIVDDLV QSGGTLIECQ KVLAAHGAAK ISAYVTHGIF PKSSWKRFKL DTKGDPAEGF SYFWITDSCG LTVKERGHVL AIERLAPRLA ALRIELCPYH
301: MTVGCFWKVY FVLLHSRLSK HDAYLLSSPQ VMEAIALWMK ELQNQTNSTK TGRGDILQEP STSSFYHHAP PEFLSPRIYA FEPPSIMYRD VETVSQNVQF
401: IDKAVIEEEP IQKIDKNSGS LRPTLKDDDD DDDWPEEEDC GHKWAPMYTV NEDDVSFSDL EGDDDISSIV LKSNSTTSKG INQKGT

Best Arabidopsis Sequence Match ( AT1G10700.1 )
(BLAST)

001: MAAISPANAT TAASLSLPQF SSTSSSLSSS SSPSFLNFKT ASVSNRCIKC GVRSLENHSG HRSLDFLSNG DPISLINPNS SSPITMAAAT SESGSKSSKR
101: VCLFHSDETR DLAERIVAKS DCIELRSINW KKFDDGFPNL FIQNAQGIRG QHVAFLASFS SPAVIFEQLS VIYALPKLFV SSFTLVLPFF PTGTSERMED
201: EGDVATAFTL ARILSNIPTS RGGPTSLVTF DIHALQERFY FGDTILPCFE SGIPLLKSRL QSLPDSDNIS IAFPDDGAWK RFHKQLQHYP TIVCNKVRMG
301: DKRIVRIKEG DAEGRHVVIV DDLVQSGGTL IECQKVLAAH GAAKISAYVT HGIFPRSSWK RFKLDTKGDP AEGLSYFWIT DSCGMTVKEV MNKPPFEVLS
401: LAGSIASALQ V

Arabidopsis Description

PRS3Ribose-phosphate pyrophosphokinase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93Z66]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.