CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P14200_001	Banana	cytosol	59.8	80.53
KRH74537	Soybean	endoplasmic reticulum, plastid	77.21	77.21
HORVU3Hr1G068700.3	Barley	cytosol	61.52	75.83
PGSC0003DMT400035565	Potato	cytosol	23.28	74.8
VIT_00s0225g00140.t01	Wine grape	plastid	68.87	71.5
KRG98919	Soybean	cytosol	54.66	69.69
Solyc04g039650.2.1	Tomato	plastid	13.48	69.62
KRH46053	Soybean	cytosol, nucleus	54.17	69.06
CDX97905	Canola	plastid	65.2	65.04
Solyc04g039620.2.1	Tomato	plastid	51.47	64.81
CDY19314	Canola	plastid	65.44	64.81
AT1G10700.1	Thale cress	plastid	64.95	64.48
TraesCS3B01G319600.1	Wheat	plastid	62.5	62.65
TraesCS3D01G285500.2	Wheat	plastid	62.5	62.65
TraesCS3A01G285700.1	Wheat	plastid	62.5	62.65
Os01t0723600-01	Rice	plastid	62.01	61.86
EES01390	Sorghum	plastid	60.78	60.93
Zm00001d043600_P001	Maize	plastid	40.69	46.37
Bra019905.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	53.19	44.65
KRH66354	Soybean	nucleus	20.34	20.54
KRH48933	Soybean	plastid	19.85	20.15
KRH57590	Soybean	nucleus	19.12	19.85
KRH04308	Soybean	plastid	19.61	19.7

Protein Annotations

KEGG:00030+2.7.6.1	KEGG:00230+2.7.6.1	EntrezGene:100783631	Gene3D:3.40.50.2020	MapMan:4.1.1.2.1	EMBL:ACUP02000722
EnsemblPlantsGene:GLYMA_02G038000	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004749	GO:GO:0005488
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009116	GO:GO:0009165
GO:GO:0009987	GO:GO:0016740	UniProt:I1JC62	EnsemblPlants:KRH69621	ProteinID:KRH69621	ProteinID:KRH69621.1
PFAM:PF00156	PFAM:PF13793	InterPro:PRTase-like	InterPro:PRibTrfase_dom	PANTHER:PTHR10210	PANTHER:PTHR10210:SF45
InterPro:Pribosyltran_N	SMART:SM01400	SUPFAM:SSF53271	UniParc:UPI00023BE179	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:-:3537630..3541983

Molecular Weight (calculated)

45284.1 Da

IEP (calculated)

8.173

GRAVY (calculated)

-0.121

Length

408 amino acids

Sequence
(BLAST)

001: MAATPPPPSF SLHSNKPSHS HSLLRLSSNE NRTFFSFNSN LRCEIKGFES HRGWTIERVS DMSKDSANSH ITNPSSPFLS VSSVTSASQF PTKNAKRVVL
101: FYCPETKVLA EKIAAQTDSI ELRNISWGKF PDGFPNIFIP NAQGIRGMHV AFLASFSSPA VIFEQIPVIY ALPKLFIASF TLVLPFFPTG TSERMEDEGD
201: IATAFTLARL LSNIPISRGG PTSLVTFDIH ALQERFYFGD NILPCFESGI PLLKRRLQDL PDSDNISIAF PDDGAWKRFH KQLQHFPTIV CAKVREGDQR
301: MVRIKEGDPR GRHIVIVDDL VQSGGTLIEC QKVLAAHGAT KISAYVTHGI FPNKSWARFG HDNGGHPESA FTYFWITDSC PLTVRDVMNR PPFEILSLAS
401: SISASLQI

Best Arabidopsis Sequence Match ( AT1G10700.1 )
(BLAST)

001: MAAISPANAT TAASLSLPQF SSTSSSLSSS SSPSFLNFKT ASVSNRCIKC GVRSLENHSG HRSLDFLSNG DPISLINPNS SSPITMAAAT SESGSKSSKR
101: VCLFHSDETR DLAERIVAKS DCIELRSINW KKFDDGFPNL FIQNAQGIRG QHVAFLASFS SPAVIFEQLS VIYALPKLFV SSFTLVLPFF PTGTSERMED
201: EGDVATAFTL ARILSNIPTS RGGPTSLVTF DIHALQERFY FGDTILPCFE SGIPLLKSRL QSLPDSDNIS IAFPDDGAWK RFHKQLQHYP TIVCNKVRMG
301: DKRIVRIKEG DAEGRHVVIV DDLVQSGGTL IECQKVLAAH GAAKISAYVT HGIFPRSSWK RFKLDTKGDP AEGLSYFWIT DSCGMTVKEV MNKPPFEVLS
401: LAGSIASALQ V

Arabidopsis Description

PRS3Ribose-phosphate pyrophosphokinase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93Z66]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.