Factsheet for VIT_00s0225g00140.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
extracellular 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P14200_001	Banana	cytosol	64.63	83.83
PGSC0003DMT400035565	Potato	cytosol	26.46	81.89
Solyc04g039650.2.1	Tomato	plastid	16.29	81.01
HORVU3Hr1G068700.3	Barley	cytosol	61.83	73.41
VIT_12s0142g00090.t01	Wine grape	cytosol	58.78	70.86
KRH74537	Soybean	endoplasmic reticulum, plastid	71.76	69.12
KRH69621	Soybean	plastid	71.5	68.87
Solyc04g039620.2.1	Tomato	plastid	54.96	66.67
AT1G10700.1	Thale cress	plastid	68.96	65.94
CDX97905	Canola	plastid	68.19	65.53
CDY19314	Canola	plastid	68.19	65.05
Os01t0723600-01	Rice	plastid	66.67	64.06
EES01390	Sorghum	plastid	63.87	61.67
TraesCS3A01G285700.1	Wheat	plastid	63.87	61.67
TraesCS3B01G319600.1	Wheat	plastid	63.87	61.67
TraesCS3D01G285500.2	Wheat	plastid	63.87	61.67
Bra019905.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	57.25	46.3
Zm00001d043600_P001	Maize	plastid	41.98	46.09
VIT_15s0021g00460.t01	Wine grape	plastid	20.1	19.6
VIT_02s0012g00530.t01	Wine grape	plastid	18.83	18.64

Protein Annotations

KEGG:00030+2.7.6.1	KEGG:00230+2.7.6.1	EntrezGene:100259732	wikigene:100259732	Gene3D:3.40.50.2020	MapMan:4.1.1.2.1
ProteinID:CBI23369	ProteinID:CBI23369.3	UniProt:D7SYR8	EMBL:FN595256	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0004749	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009116	GO:GO:0009165	GO:GO:0009987	GO:GO:0016740	EntrezGene:LOC100259732
wikigene:LOC100259732	PFAM:PF00156	PFAM:PF13793	InterPro:PRTase-like	InterPro:PRibTrfase_dom	PANTHER:PTHR10210
PANTHER:PTHR10210:SF45	InterPro:Pribosyltran_N	InterPro:Rib-P_diPkinase	SMART:SM01400	SUPFAM:SSF53271	TIGRFAMs:TIGR01251
UniParc:UPI00015CD858	ArrayExpress:VIT_00s0225g00140	EnsemblPlantsGene:VIT_00s0225g00140	EnsemblPlants:VIT_00s0225g00140.t01	RefSeq:XP_002272590	RefSeq:XP_002272590.2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:14688460..14693479

Molecular Weight (calculated)

43449.5 Da

IEP (calculated)

8.795

GRAVY (calculated)

-0.008

Length

393 amino acids

Sequence
(BLAST)

001: MSPAPPLHCS FSAPIQTLKP ILTLPLIPFS KKDKFRFRCE LTSFGKPQKW AVEFDSTTIP NPRPVLMAST ATLTSSPRNA KKVCLFYCAE TKALAERIAA
101: ESDAIELRSI TWRTFEDGFP NLFISNAQGI RGQHVAFLAS FSSPGVIFEQ LSVIYALPKL FISSFTLVLP FFPTGTSERM EEEGDIATAF TLARILSNIP
201: ISRGGPTSLV TFDIHALQER FYFGDNILPC FDSGIPLLKA RLQQLPDSDN ISIAFPDDGA WKRFHKQLQH FPTIVCAKVR EGNQRIVRIK EGDPKGRHVV
301: IVDDLVQSGG TLIQCQKVLA SHGAAKISAY VTHGIFPNRS WQRFGEDKGG CPANGLTYFW ITDSCPLTVK EVKNKPPFEV LSLASSIAAT LQI

Best Arabidopsis Sequence Match ( AT1G10700.1 )
(BLAST)

001: MAAISPANAT TAASLSLPQF SSTSSSLSSS SSPSFLNFKT ASVSNRCIKC GVRSLENHSG HRSLDFLSNG DPISLINPNS SSPITMAAAT SESGSKSSKR
101: VCLFHSDETR DLAERIVAKS DCIELRSINW KKFDDGFPNL FIQNAQGIRG QHVAFLASFS SPAVIFEQLS VIYALPKLFV SSFTLVLPFF PTGTSERMED
201: EGDVATAFTL ARILSNIPTS RGGPTSLVTF DIHALQERFY FGDTILPCFE SGIPLLKSRL QSLPDSDNIS IAFPDDGAWK RFHKQLQHYP TIVCNKVRMG
301: DKRIVRIKEG DAEGRHVVIV DDLVQSGGTL IECQKVLAAH GAAKISAYVT HGIFPRSSWK RFKLDTKGDP AEGLSYFWIT DSCGMTVKEV MNKPPFEVLS
401: LAGSIASALQ V

Arabidopsis Description

PRS3Ribose-phosphate pyrophosphokinase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93Z66]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.