Factsheet for TraesCS3D01G285500.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G285700.1	Wheat	plastid	100.0	100.0
TraesCS3B01G319600.1	Wheat	plastid	99.75	99.75
HORVU3Hr1G068700.3	Barley	cytosol	79.85	98.19
GSMUA_Achr2P14200_001	Banana	cytosol	60.93	81.85
Os01t0723600-01	Rice	plastid	74.94	74.57
PGSC0003DMT400035565	Potato	cytosol	22.36	71.65
EES01390	Sorghum	plastid	71.5	71.5
Solyc04g039650.2.1	Tomato	plastid	12.78	65.82
VIT_00s0225g00140.t01	Wine grape	plastid	61.67	63.87
KRH74537	Soybean	endoplasmic reticulum, plastid	62.9	62.75
KRH69621	Soybean	plastid	62.65	62.5
CDY19314	Canola	plastid	63.15	62.38
CDX97905	Canola	plastid	61.92	61.61
AT1G10700.1	Thale cress	plastid	61.92	61.31
Solyc04g039620.2.1	Tomato	plastid	48.16	60.49
Zm00001d043600_P001	Maize	plastid	51.6	58.66
TraesCS6D01G259800.1	Wheat	golgi, plastid, unclear	57.49	56.52
Bra019905.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	51.35	43.0
TraesCS7D01G396300.1	Wheat	plastid	19.41	19.7

Protein Annotations

EnsemblPlants:TraesCS3D01G285500.2	EnsemblPlantsGene:TraesCS3D01G285500	Gene3D:3.40.50.2020	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009116	GO:GO:0009987	InterPro:PRTase-like	InterPro:PRibTrfase_dom	InterPro:Pribosyltran_N	KEGG:00030+2.7.6.1
KEGG:00230+2.7.6.1	PANTHER:PTHR10210	PANTHER:PTHR10210:SF45	PFAM:PF00156	PFAM:PF13793	SEG:seg
SMART:SM01400	SUPFAM:SSF53271	TIGR:cd06223	MapMan:4.1.1.2.1	:	:

Description

No Description!

Coordinates

chr3D:-:394912037..394915550

Molecular Weight (calculated)

43899.6 Da

IEP (calculated)

7.439

GRAVY (calculated)

-0.006

Length

407 amino acids

Sequence
(BLAST)

001: MATAASASAS PAALRAKTPA PGAHPSPKSS LAFPWPSPGA SASASAAASG RLHASLHLGG VRGVGTANGT GLHVLHPDVK PLAVPKMAGG AGAQKSILLY
101: HCEEMRDLAQ QVAARNDDIE LCTISWRKFP DGFPDLFIPN AQNIRGRHVA FLASFSSPGV IFEQISIIYN LPKLFIASFT LILPFFPTGT SERMEDEGDV
201: ATAFTLARSL SHIPISRGGP TSLVIFDIHA LQERFYFGDA ILPCFESGIP LLKSRLQELP DSDNIAIAFP DDGAWKRFYK QLQHFPMIIC NKVREGDQRI
301: VRIKEGDARG RHVVIVDDLV QSGGTLIECQ KVLAAHGAAK VSAYVTHGIF PNKSWEKFKP DNGEGPEHAL SHFWITDSCP LTVEAVKDRR PFEILSLADS
401: IASALQI

Best Arabidopsis Sequence Match ( AT1G10700.1 )
(BLAST)

001: MAAISPANAT TAASLSLPQF SSTSSSLSSS SSPSFLNFKT ASVSNRCIKC GVRSLENHSG HRSLDFLSNG DPISLINPNS SSPITMAAAT SESGSKSSKR
101: VCLFHSDETR DLAERIVAKS DCIELRSINW KKFDDGFPNL FIQNAQGIRG QHVAFLASFS SPAVIFEQLS VIYALPKLFV SSFTLVLPFF PTGTSERMED
201: EGDVATAFTL ARILSNIPTS RGGPTSLVTF DIHALQERFY FGDTILPCFE SGIPLLKSRL QSLPDSDNIS IAFPDDGAWK RFHKQLQHYP TIVCNKVRMG
301: DKRIVRIKEG DAEGRHVVIV DDLVQSGGTL IECQKVLAAH GAAKISAYVT HGIFPRSSWK RFKLDTKGDP AEGLSYFWIT DSCGMTVKEV MNKPPFEVLS
401: LAGSIASALQ V

Arabidopsis Description

PRS3Ribose-phosphate pyrophosphokinase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93Z66]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.