CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97905	Canola	plastid	91.99	92.67
AT1G10700.1	Thale cress	plastid	80.34	80.54
GSMUA_Achr2P14200_001	Banana	cytosol	59.22	80.53
HORVU3Hr1G068700.3	Barley	cytosol	59.22	73.72
PGSC0003DMT400035565	Potato	cytosol	22.33	72.44
Solyc04g039650.2.1	Tomato	plastid	13.11	68.35
VIT_00s0225g00140.t01	Wine grape	plastid	65.05	68.19
CDY60199	Canola	cytosol	55.58	67.16
CDX83511	Canola	cytosol	55.58	66.96
CDX79840	Canola	cytosol	55.34	66.47
CDY42811	Canola	cytosol	49.51	66.02
Solyc04g039620.2.1	Tomato	plastid	51.7	65.74
KRH69621	Soybean	plastid	64.81	65.44
KRH74537	Soybean	endoplasmic reticulum, plastid	64.32	64.95
TraesCS3A01G285700.1	Wheat	plastid	62.38	63.15
TraesCS3B01G319600.1	Wheat	plastid	62.38	63.15
TraesCS3D01G285500.2	Wheat	plastid	62.38	63.15
Os01t0723600-01	Rice	plastid	62.38	62.84
EES01390	Sorghum	plastid	60.92	61.67
Bra019905.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	63.59	53.91
Zm00001d043600_P001	Maize	plastid	41.26	47.49
CDY68772	Canola	endoplasmic reticulum, golgi	18.45	22.89
CDY30476	Canola	plastid	19.42	19.95
CDY23440	Canola	plastid	18.45	19.79
CDY31684	Canola	plastid	18.93	19.55
CDX84209	Canola	plastid	18.93	19.55
CDY01279	Canola	plastid	18.45	19.14
CDX93837	Canola	plastid	18.45	19.14
CDY32299	Canola	plastid	18.45	18.72

Protein Annotations

KEGG:00030+2.7.6.1	KEGG:00230+2.7.6.1	Gene3D:3.40.50.2020	MapMan:4.1.1.2.1	GO:A0A078G1H3	UniProt:A0A078G1H3
EnsemblPlants:CDY19314	ProteinID:CDY19314	ProteinID:CDY19314.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004749	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009116	GO:GO:0009165	GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00008830001	PFAM:PF00156
PFAM:PF13793	InterPro:PRTase-like	InterPro:PRibTrfase_dom	PANTHER:PTHR10210	PANTHER:PTHR10210:SF45	InterPro:Pribosyltran_N
InterPro:Rib-P_diPkinase	SMART:SM01400	SUPFAM:SSF53271	TIGRFAMs:TIGR01251	UniPathway:UPA00087	UniParc:UPI0004EE3A9C
SEG:seg	:	:	:	:	:

Description

BnaC05g08230DBnaC05g08230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G1H3]

Coordinates

chrLK032095:+:11947..14426

Molecular Weight (calculated)

44659.2 Da

IEP (calculated)

7.741

GRAVY (calculated)

-0.025

Length

412 amino acids

Sequence
(BLAST)

001: MAAISPATAT TAASLSLPQF SSSPSSLSSS SSPFSLNFKT ATVGSRCVRC GVRSLENPSG HRSLDFLSNG DPISLINPNS SSSPISMSAS ASESGSKCSK
101: RVCLFHSDET RDLAERIVAQ SDCIELRSIN WKKFDDGFPN LFIQNAQGIR GQHVAFLASF SSPAVIFEQL SVVYALPKLF VSSFTLVLPF FPTGTSERME
201: DEGDVATAFT LARILSNIPA SRGGPTSLVT FDIHALQERF YFGDTILPCF ESGIPLLKNR LQALPDSDNI SIAFPDDGAW KRFHKQLQHY PTIVCNKVRM
301: GDKRIVRIKE GDAEGRHVVI VDDLVQSGGT LIECQKVLAA HGAAKISAYV THGIFPKSSW KRFKLDTKGD PAEGFSYFWI TDSCGLTVKE VMNKPPFEVL
401: SLAGSIASAL QV

Best Arabidopsis Sequence Match ( AT1G10700.1 )
(BLAST)

001: MAAISPANAT TAASLSLPQF SSTSSSLSSS SSPSFLNFKT ASVSNRCIKC GVRSLENHSG HRSLDFLSNG DPISLINPNS SSPITMAAAT SESGSKSSKR
101: VCLFHSDETR DLAERIVAKS DCIELRSINW KKFDDGFPNL FIQNAQGIRG QHVAFLASFS SPAVIFEQLS VIYALPKLFV SSFTLVLPFF PTGTSERMED
201: EGDVATAFTL ARILSNIPTS RGGPTSLVTF DIHALQERFY FGDTILPCFE SGIPLLKSRL QSLPDSDNIS IAFPDDGAWK RFHKQLQHYP TIVCNKVRMG
301: DKRIVRIKEG DAEGRHVVIV DDLVQSGGTL IECQKVLAAH GAAKISAYVT HGIFPRSSWK RFKLDTKGDP AEGLSYFWIT DSCGMTVKEV MNKPPFEVLS
401: LAGSIASALQ V

Arabidopsis Description

PRS3Ribose-phosphate pyrophosphokinase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93Z66]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.