CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19314	Canola	plastid	92.67	91.99
AT1G10700.1	Thale cress	plastid	85.09	84.67
GSMUA_Achr2P14200_001	Banana	cytosol	59.9	80.86
HORVU3Hr1G068700.3	Barley	cytosol	59.9	74.02
PGSC0003DMT400035565	Potato	cytosol	22.49	72.44
Solyc04g039650.2.1	Tomato	plastid	13.2	68.35
VIT_00s0225g00140.t01	Wine grape	plastid	65.53	68.19
CDY60199	Canola	cytosol	55.99	67.16
CDX83511	Canola	cytosol	55.99	66.96
CDX79840	Canola	cytosol	55.99	66.76
Solyc04g039620.2.1	Tomato	plastid	52.81	66.67
CDY42811	Canola	cytosol	49.88	66.02
KRH74537	Soybean	endoplasmic reticulum, plastid	65.28	65.44
KRH69621	Soybean	plastid	65.04	65.2
Os01t0723600-01	Rice	plastid	63.33	63.33
TraesCS3A01G285700.1	Wheat	plastid	61.61	61.92
TraesCS3B01G319600.1	Wheat	plastid	61.61	61.92
TraesCS3D01G285500.2	Wheat	plastid	61.61	61.92
EES01390	Sorghum	plastid	61.12	61.43
Bra019905.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	64.55	54.32
Zm00001d043600_P001	Maize	plastid	40.83	46.65
CDY68772	Canola	endoplasmic reticulum, golgi	18.09	22.29
CDY30476	Canola	plastid	19.32	19.7
CDY23440	Canola	plastid	18.34	19.53
CDY01279	Canola	plastid	17.85	18.39
CDX93837	Canola	plastid	17.85	18.39
CDY31684	Canola	plastid	17.6	18.05
CDX84209	Canola	plastid	17.6	18.05
CDY32299	Canola	plastid	17.85	17.98

Protein Annotations

KEGG:00030+2.7.6.1	KEGG:00230+2.7.6.1	Gene3D:3.40.50.2020	MapMan:4.1.1.2.1	GO:A0A078E715	EnsemblPlants:CDX97905
ProteinID:CDX97905	ProteinID:CDX97905.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004749
GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009116
GO:GO:0009165	GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00105247001	PFAM:PF00156	PFAM:PF13793
InterPro:PRTase-like	InterPro:PRibTrfase_dom	PANTHER:PTHR10210	PANTHER:PTHR10210:SF45	InterPro:Pribosyltran_N	InterPro:Rib-P_diPkinase
SMART:SM01400	SUPFAM:SSF53271	TIGRFAMs:TIGR01251	UniPathway:UPA00087	UniParc:UPI0004EE95E3	SEG:seg

Description

BnaA06g06560D

Coordinates

chrLK031902:+:1412..3748

Molecular Weight (calculated)

44363.9 Da

IEP (calculated)

7.741

GRAVY (calculated)

-0.027

Length

409 amino acids

Sequence
(BLAST)

001: MAAITPATAT TAASLSLPQL NSSPSSLSSS SSLNFKTATV GSRCVRCGVR SLENQSGHRS LDFLSNGDPI SLINPNSSSS PISMAASASE SGSKCSKRVC
101: LFHSDETRDL AERIVAQSDC IELRSINWKK FDDGFPNLFI QNAQGIRGQH VAFLASFSSP AVIFEQLSVI YALPKLFVSS FTLVLPFFPT GTSERMEDEG
201: DVATAFTLAR ILSNIPASRG GPTSLVTFDI HALQERFYFG DTILPCFESG IPLLKNRLQA LPDSDNISIA FPDDGAWKRF HKQLQHYPTI VCNKVRMGDK
301: RIVRIKEGDA EGRHVVIVDD LVQSGGTLIE CQKVLAAHGA AKISAYVTHG IFPKSSWKRF KLDTKGDPAE GFSYFWITDS CGLTVKEVMN KPPFEVLSLA
401: GSIASALQV

Best Arabidopsis Sequence Match ( AT1G10700.1 )
(BLAST)

001: MAAISPANAT TAASLSLPQF SSTSSSLSSS SSPSFLNFKT ASVSNRCIKC GVRSLENHSG HRSLDFLSNG DPISLINPNS SSPITMAAAT SESGSKSSKR
101: VCLFHSDETR DLAERIVAKS DCIELRSINW KKFDDGFPNL FIQNAQGIRG QHVAFLASFS SPAVIFEQLS VIYALPKLFV SSFTLVLPFF PTGTSERMED
201: EGDVATAFTL ARILSNIPTS RGGPTSLVTF DIHALQERFY FGDTILPCFE SGIPLLKSRL QSLPDSDNIS IAFPDDGAWK RFHKQLQHYP TIVCNKVRMG
301: DKRIVRIKEG DAEGRHVVIV DDLVQSGGTL IECQKVLAAH GAAKISAYVT HGIFPRSSWK RFKLDTKGDP AEGLSYFWIT DSCGMTVKEV MNKPPFEVLS
401: LAGSIASALQ V

Arabidopsis Description

PRS3Ribose-phosphate pyrophosphokinase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93Z66]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.