Factsheet for Solyc04g039620.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P14200_001	Banana	cytosol	60.19	64.36
HORVU3Hr1G068700.3	Barley	cytosol	58.95	57.7
Solyc10g007760.2.1	Tomato	extracellular, nucleus, plastid	57.1	57.45
Solyc07g056330.2.1	Tomato	cytosol, nucleus	56.17	56.88
VIT_00s0225g00140.t01	Wine grape	plastid	66.67	54.96
CDX97905	Canola	plastid	66.67	52.81
AT1G10700.1	Thale cress	plastid	66.98	52.8
CDY19314	Canola	plastid	65.74	51.7
KRH69621	Soybean	plastid	64.81	51.47
KRH74537	Soybean	endoplasmic reticulum, plastid	64.81	51.47
Os01t0723600-01	Rice	plastid	63.27	50.12
EES01390	Sorghum	plastid	62.35	49.63
TraesCS3A01G285700.1	Wheat	plastid	60.49	48.16
TraesCS3B01G319600.1	Wheat	plastid	60.49	48.16
TraesCS3D01G285500.2	Wheat	plastid	60.49	48.16
Bra019905.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	56.48	37.65
Zm00001d043600_P001	Maize	plastid	35.19	31.84
Solyc10g024410.1.1	Tomato	cytosol, nucleus	16.05	17.93
Solyc08g077200.2.1	Tomato	plastid	20.06	16.37
Solyc06g061040.2.1	Tomato	plastid	20.06	16.13
Solyc04g039650.2.1	Tomato	plastid	0.0	0.0

Protein Annotations

KEGG:00030+2.7.6.1	KEGG:00230+2.7.6.1	Gene3D:3.40.50.2020	MapMan:4.1.1.2.1	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0004749	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009116	GO:GO:0009165	GO:GO:0009987	GO:GO:0016740	UniProt:K4BRA1
PFAM:PF00156	PFAM:PF13793	InterPro:PRTase-like	InterPro:PRibTrfase_dom	PANTHER:PTHR10210	PANTHER:PTHR10210:SF45
InterPro:Pribosyltran_N	SMART:SM01400	SUPFAM:SSF53271	EnsemblPlantsGene:Solyc04g039620.2	EnsemblPlants:Solyc04g039620.2.1	UniParc:UPI0002765FFB

Description

Ribose-phosphate pyrophosphokinase 3, chloroplastic [Source:Projected from Arabidopsis thaliana (AT1G10700) UniProtKB/Swiss-Prot;Acc:Q93Z66]

Coordinates

chr4:-:13369921..13386619

Molecular Weight (calculated)

36093.3 Da

IEP (calculated)

7.166

GRAVY (calculated)

-0.101

Length

324 amino acids

Sequence
(BLAST)

001: MSTTTPPSPP QRLAALPCHT SNKLRNYTPI QSFNRKDFSI RCEFENSQRW TVGCVSGTDP IHIILKPPSI PMTSAAVLGS SGKNSKRVCL FYCNEMKDLA
101: ERIASQSDAI ELRNITWRTF EDGFPNLFIS NAHGIRGQHV AFLASFNSPG VIFEQLSVIY ALPKLFVSSF TLVLPFFPTG TSERMEDEGD VATAFTLARI
201: LSNTPVPRGG PTSLVIFDIH ALQERFYFGD NILPCFESGI PLLLNRLQQL PDSDNISIAF PDDGAWKRFH KQLQHFPMIV CAKVREGDQR IVRIKEGDPA
301: GRHVVIVDDL VQSGGTLTEC QYVC

Best Arabidopsis Sequence Match ( AT1G10700.1 )
(BLAST)

001: MAAISPANAT TAASLSLPQF SSTSSSLSSS SSPSFLNFKT ASVSNRCIKC GVRSLENHSG HRSLDFLSNG DPISLINPNS SSPITMAAAT SESGSKSSKR
101: VCLFHSDETR DLAERIVAKS DCIELRSINW KKFDDGFPNL FIQNAQGIRG QHVAFLASFS SPAVIFEQLS VIYALPKLFV SSFTLVLPFF PTGTSERMED
201: EGDVATAFTL ARILSNIPTS RGGPTSLVTF DIHALQERFY FGDTILPCFE SGIPLLKSRL QSLPDSDNIS IAFPDDGAWK RFHKQLQHYP TIVCNKVRMG
301: DKRIVRIKEG DAEGRHVVIV DDLVQSGGTL IECQKVLAAH GAAKISAYVT HGIFPRSSWK RFKLDTKGDP AEGLSYFWIT DSCGMTVKEV MNKPPFEVLS
401: LAGSIASALQ V

Arabidopsis Description

PRS3Ribose-phosphate pyrophosphokinase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93Z66]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.