Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
- cytosol 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
plastid:
20363867
plastid: 22908117 nucleus: 28394025 |
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400062265 | Potato | plastid | 99.5 | 99.5 |
Solyc10g024410.1.1 | Tomato | cytosol, nucleus | 64.74 | 88.62 |
GSMUA_Achr11P... | Banana | cytosol, plastid | 71.79 | 84.57 |
GSMUA_Achr2P12090_001 | Banana | cytosol, mitochondrion | 69.02 | 82.53 |
CDY68772 | Canola | endoplasmic reticulum, golgi | 67.25 | 80.42 |
KRH57590 | Soybean | nucleus | 78.84 | 79.64 |
AT1G32380.1 | Thale cress | plastid | 79.85 | 79.25 |
Bra023263.1-P | Field mustard | plastid | 78.84 | 79.24 |
CDY01279 | Canola | plastid | 78.84 | 78.84 |
CDX93837 | Canola | plastid | 78.59 | 78.59 |
VIT_02s0012g00530.t01 | Wine grape | plastid | 78.34 | 78.34 |
CDY31684 | Canola | plastid | 78.34 | 77.94 |
AT2G35390.2 | Thale cress | plastid | 79.09 | 77.92 |
Bra005344.1-P | Field mustard | plastid | 78.09 | 77.69 |
CDX84209 | Canola | plastid | 78.09 | 77.69 |
KRH04308 | Soybean | plastid | 78.59 | 76.85 |
CDY32299 | Canola | plastid | 78.59 | 76.85 |
HORVU6Hr1G015080.5 | Barley | mitochondrion | 71.79 | 76.2 |
Os02t0127700-02 | Rice | plastid | 72.04 | 72.22 |
Solyc06g061040.2.1 | Tomato | plastid | 73.3 | 72.21 |
Zm00001d015115_P001 | Maize | plastid | 71.54 | 71.18 |
TraesCS6A01G088200.2 | Wheat | nucleus | 72.04 | 70.97 |
TraesCSU01G018200.1 | Wheat | plastid | 72.04 | 70.97 |
EES06216 | Sorghum | plastid | 71.03 | 70.85 |
TraesCS6B01G110600.1 | Wheat | plastid | 72.04 | 70.79 |
Bra010159.1-P | Field mustard | plastid | 27.96 | 48.68 |
Solyc10g007760.2.1 | Tomato | extracellular, nucleus, plastid | 18.14 | 22.36 |
Solyc07g056330.2.1 | Tomato | cytosol, nucleus | 17.88 | 22.19 |
Solyc04g039620.2.1 | Tomato | plastid | 16.37 | 20.06 |
Solyc04g039650.2.1 | Tomato | plastid | 2.77 | 13.92 |
Protein Annotations
KEGG:00030+2.7.6.1 | KEGG:00230+2.7.6.1 | Gene3D:3.40.50.2020 | MapMan:50.2.7 | GO:GO:0000287 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0004749 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009058 | GO:GO:0009116 | GO:GO:0009156 | GO:GO:0009165 | GO:GO:0009987 | GO:GO:0016740 |
GO:GO:0044249 | UniProt:K4CN80 | HAMAP:MF_00583_B | PFAM:PF13793 | PFAM:PF14572 | InterPro:PRTase-like |
InterPro:PRibTrfase_dom | InterPro:PRib_PP_synth_CS | ScanProsite:PS00114 | PANTHER:PTHR10210 | PANTHER:PTHR10210:SF54 | InterPro:Pribosyltran_N |
InterPro:Rib-P_diPkinase | InterPro:Rib-P_diPkinase_bac | SMART:SM01400 | SUPFAM:SSF53271 | EnsemblPlantsGene:Solyc08g077200.2 | EnsemblPlants:Solyc08g077200.2.1 |
TIGRFAMs:TIGR01251 | UniParc:UPI000276C2A1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr8:+:61101856..61107524
Molecular Weight (calculated)
43174.1 Da
IEP (calculated)
8.204
GRAVY (calculated)
0.039
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MASFLVLPSP SSASTSYSTP LFSSSRSFLT HKSFVPKRTC LRTSVNCEIS EPVNGKPRVP IINDGTLPKF LQASRLQNSV SRNNNRLKIF TGTANPSLSQ
101: EIAWYMGFEL GKVKIKRFAD GEIYVQLQES VRGCDVYLVQ STCPPANENL MELLVMIDAC RRASAKTITA VIPYFGYARA DRKTQGRESI GAKLVANLIT
201: EAGADRVLAC DLHSGQSMGY FDIPVDHVYC QPVVLDYLAS KKISSDDLVV VSPDVGGVAR ARAFAKKLSD APLAIVDKRR HGHNVAEVMN LIGDVKGKVA
301: VMVDDMIDTA GTIAKGAALL HQEGAREVYA CCTHAVFSPP AIERLSSGLF QEVIVTNTIP AIEKNCFPQL TVLSVANLLG ETIWRVHDDC SVSSIFQ
101: EIAWYMGFEL GKVKIKRFAD GEIYVQLQES VRGCDVYLVQ STCPPANENL MELLVMIDAC RRASAKTITA VIPYFGYARA DRKTQGRESI GAKLVANLIT
201: EAGADRVLAC DLHSGQSMGY FDIPVDHVYC QPVVLDYLAS KKISSDDLVV VSPDVGGVAR ARAFAKKLSD APLAIVDKRR HGHNVAEVMN LIGDVKGKVA
301: VMVDDMIDTA GTIAKGAALL HQEGAREVYA CCTHAVFSPP AIERLSSGLF QEVIVTNTIP AIEKNCFPQL TVLSVANLLG ETIWRVHDDC SVSSIFQ
001: MASLALTSPP SVKIPSYLSS SSSSLFSRSS ISFRTTESRS RICVSGYAKC NLPKALNGNA RVPIINETTI PKFFDSSRLE KSVSRNNTKL KLFSGTANPA
101: LSQEIAWYMG LELGKVSIKR FADGEIYVQL KESVRGCDVF LVQPTCTPTN ENLMELLIMV DACRRASAKK VTAVIPYFGY ARADRKTQGR ESIAAKLVAN
201: LITEAGADRV LACDLHSGQS MGYFDIPVDH VYCQPVILDY LASKSISSED LVVVSPDVGG VARARAFAKK LSDAPLAIVD KRRHGHNVAE VMNLIGDVKG
301: KVAVMVDDII DTAGTIVKGA ALLHEEGARE VYACCTHAVF SPPAIERLSS GLLQEVIVTN TLPVAEKNYF PQLTILSVAN LLGETIWRVH DDSSVSSIFL
101: LSQEIAWYMG LELGKVSIKR FADGEIYVQL KESVRGCDVF LVQPTCTPTN ENLMELLIMV DACRRASAKK VTAVIPYFGY ARADRKTQGR ESIAAKLVAN
201: LITEAGADRV LACDLHSGQS MGYFDIPVDH VYCQPVILDY LASKSISSED LVVVSPDVGG VARARAFAKK LSDAPLAIVD KRRHGHNVAE VMNLIGDVKG
301: KVAVMVDDII DTAGTIVKGA ALLHEEGARE VYACCTHAVF SPPAIERLSS GLLQEVIVTN TLPVAEKNYF PQLTILSVAN LLGETIWRVH DDSSVSSIFL
Arabidopsis Description
PRS2Ribose-phosphate pyrophosphokinase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42583]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.