Factsheet for Bra005344.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31684	Canola	plastid	99.75	99.75
CDX84209	Canola	plastid	99.25	99.25
AT2G35390.2	Thale cress	plastid	93.98	93.05
Bra023263.1-P	Field mustard	plastid	86.22	87.09
GSMUA_Achr11P...	Banana	cytosol, plastid	68.92	81.6
KRH57590	Soybean	nucleus	78.95	80.15
GSMUA_Achr2P12090_001	Banana	cytosol, mitochondrion	66.67	80.12
Solyc08g077200.2.1	Tomato	plastid	77.69	78.09
PGSC0003DMT400062265	Potato	plastid	77.69	78.09
VIT_02s0012g00530.t01	Wine grape	plastid	77.19	77.58
KRH04308	Soybean	plastid	77.69	76.35
HORVU6Hr1G015080.5	Barley	mitochondrion	68.67	73.26
Os02t0127700-02	Rice	plastid	69.42	69.95
Zm00001d015115_P001	Maize	plastid	69.92	69.92
EES06216	Sorghum	plastid	69.42	69.6
TraesCS6B01G110600.1	Wheat	plastid	70.18	69.31
TraesCS6A01G088200.2	Wheat	nucleus	69.92	69.23
PGSC0003DMT400068395	Potato	plastid	69.17	69.0
TraesCSU01G018200.1	Wheat	plastid	69.42	68.73
Solyc06g061040.2.1	Tomato	plastid	69.17	68.49
Bra037645.1-P	Field mustard	plastid	70.68	68.12
Bra010159.1-P	Field mustard	plastid	30.08	52.63
Bra000280.1-P	Field mustard	cytosol	18.55	21.89
Bra004730.1-P	Field mustard	cytosol	18.55	21.57
Bra019905.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	15.79	12.96

Protein Annotations

KEGG:00030+2.7.6.1	KEGG:00230+2.7.6.1	Gene3D:3.40.50.2020	MapMan:50.2.7	EnsemblPlantsGene:Bra005344	EnsemblPlants:Bra005344.1
EnsemblPlants:Bra005344.1-P	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004749	GO:GO:0005488
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009116	GO:GO:0009156
GO:GO:0009165	GO:GO:0009987	GO:GO:0016740	GO:GO:0044249	UniProt:M4CMA6	HAMAP:MF_00583_B
PFAM:PF13793	PFAM:PF14572	InterPro:PRTase-like	InterPro:PRibTrfase_dom	InterPro:PRib_PP_synth_CS	ScanProsite:PS00114
PANTHER:PTHR10210	PANTHER:PTHR10210:SF54	InterPro:Pribosyltran_N	InterPro:Rib-P_diPkinase	InterPro:Rib-P_diPkinase_bac	SMART:SM01400
SUPFAM:SSF53271	TIGRFAMs:TIGR01251	UniParc:UPI0002547E4B	SEG:seg	:	:

Description

AT2G35390 (E=2e-194) | ribose-phosphate pyrophosphokinase 1 / phosphoribosyl diphosphate synthetase 1 (PRSI)

Coordinates

chrA05:+:4937887..4940429

Molecular Weight (calculated)

43023.8 Da

IEP (calculated)

7.439

GRAVY (calculated)

0.068

Length

399 amino acids

Sequence
(BLAST)

001: MASLALSFPP AAAKTPSYLS SSSSTVFSSS LSFTTSQSHS RNSVFASIKC DLGNGNPSIP IINERTLPKF LESARMEKSA NRSNNNTRLK LFSGTANPAL
101: SQEIAWYMGL DLGKIKIKRF ADGEIYVQLE ESVRGCDVYL VQPTCTPTNE NLMELLIMVD ACRRASAKKV TAVIPYFGYA RADRKTQGRE SIAAKLVANL
201: ITEAGADRVL ACDLHSGQSM GYFDIPVDHV YCQPVILDYL ASKSIAAEDL VVVSPDVGGV ARARAFAKKL SDAPLAIVDK RRSGHNVAEV MNLIGDVKGK
301: VAVMVDDMID TAGTIVKGAA LLHQEGAREV YACCTHAVFS PPAIERLSGG LLQEVIVTNT LPVAEKNYFP QLTILSVANL LGETIWRVHD DSSVSSIFL

Best Arabidopsis Sequence Match ( AT2G35390.2 )
(BLAST)

001: MASLGLSFPP AAKTPTYLAS SSSTFFSNSS LSVRTSQFRS RNSVFACVKC DMPESLNVGN GNPSIPIINE RTLPKFLESA RMEKSVNRTN TRLKLFSGTA
101: NPALAQEIAW YMGLDLGKVN IKRFADGEIY VQLQESVRGC DVYLVQPTCT PTNENLMELL IMVDACRRAS AKKVTAVIPY FGYARADRKT QGRESIAAKL
201: VANLITEAGA DRVLACDLHS GQSMGYFDIP VDHVYCQPVI LDYLASKSIP SEDLVVVSPD VGGVARARAF AKKLSDAPLA IVDKRRSGHN VAEVMNLIGD
301: VRGKVAIMVD DMIDTAGTIV KGAALLHQEG AREVYACCTH AVFSPPAIER LSGGLLQEVI VTNTLPVAEK NYFPQLTILS VANLLGETIW RVHDDSSVSS
401: IFL

Arabidopsis Description

PRS1Ribose-phosphate pyrophosphokinase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42581]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.